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The map label for this gene is yfhQ [C]

Identifier: 124485957

GI number: 124485957

Start: 1150739

End: 1151485

Strand: Reverse

Name: yfhQ [C]

Synonym: Mlab_1137

Alternate gene names: 124485957

Gene position: 1151485-1150739 (Counterclockwise)

Preceding gene: 124485958

Following gene: 124485956

Centisome position: 63.8

GC content: 52.61

Gene sequence:

>747_bases
ATGCCCCAGATCGACATCGTGCTAGTGGAACCTCTGTACGAAGGGAACATCGGCTTTGCCGCCCGGGTAATGAAGAACTT
CGGTTTTCACAACATGGTCCTCGTCAACCCGCCTAAACTCACGATGGAATGTACAGCCCGCTCATCCCACGCGAAGGATG
TTCTGGAGAATGCCGAACGAATTTCCCTTGAAGAGGTCTTTGCACGAAGCGATCTCTGTATCGCGACGACCGGCGGCCTT
TCCAAATCCGTCTCAAATCCGATGAGGATGCCGTATTATTCGGTCGCCGAGCTTCGCGAGATGATCGAGGGGATCGACGG
CAGGATCTCGATCCTGTTCGGTAGGGAAAACTGGGGACTGAACAATGAAGAAATCGCCAAGTGTGATATCGTCTGCACGA
TTCCGACCAGCGATGAATATCCTATCATGAACATCTCTCATGCGATCGGTATCGTCTGCTATGAACTCGCTCATCTTCAG
CGCGGCGAGTATCTTCTCGCAAACAAGACTGAGATGAATGCTTTGTATGCCCACATCGAACGGTTCCTCGAAGGCATCCA
GCATCCGATCGAAAAACGCGAGACGACGGTCCTTCTGGCAAGAAGAGTGCTTGGAAGAACGAGACTTACGGTCCGCGAAG
CAAGCACGTTACATGGTATCATGCGCAGAACCGAGTGGCATCTCAAACACCCCGGTCAGGCCTACGATGCCGAAGACCGT
GAATACTGGCCTGGAGACGAGGATTAA

Upstream 100 bases:

>100_bases
CTGCAGAAATGGGTCAGTATGCCGACACGATCGTTGTCGGAAACGCGGTCTACGAGGCCGGCCCTGCTGTTTTGAAAGAG
ACGGTGAAGGCGGTCAAATA

Downstream 100 bases:

>100_bases
TCCTCCCTCTCCGTGACAACGAATCGTAATCCTTTTAATGTTTATACGTCCTTGTAATTAGTGCAAGCATCGATAGTGTA
GTGGTTATCACTAGGCGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 247

Protein sequence:

>248_residues
MPQIDIVLVEPLYEGNIGFAARVMKNFGFHNMVLVNPPKLTMECTARSSHAKDVLENAERISLEEVFARSDLCIATTGGL
SKSVSNPMRMPYYSVAELREMIEGIDGRISILFGRENWGLNNEEIAKCDIVCTIPTSDEYPIMNISHAIGIVCYELAHLQ
RGEYLLANKTEMNALYAHIERFLEGIQHPIEKRETTVLLARRVLGRTRLTVREASTLHGIMRRTEWHLKHPGQAYDAEDR
EYWPGDED

Sequences:

>Translated_248_residues
MPQIDIVLVEPLYEGNIGFAARVMKNFGFHNMVLVNPPKLTMECTARSSHAKDVLENAERISLEEVFARSDLCIATTGGL
SKSVSNPMRMPYYSVAELREMIEGIDGRISILFGRENWGLNNEEIAKCDIVCTIPTSDEYPIMNISHAIGIVCYELAHLQ
RGEYLLANKTEMNALYAHIERFLEGIQHPIEKRETTVLLARRVLGRTRLTVREASTLHGIMRRTEWHLKHPGQAYDAEDR
EYWPGDED
>Mature_247_residues
PQIDIVLVEPLYEGNIGFAARVMKNFGFHNMVLVNPPKLTMECTARSSHAKDVLENAERISLEEVFARSDLCIATTGGLS
KSVSNPMRMPYYSVAELREMIEGIDGRISILFGRENWGLNNEEIAKCDIVCTIPTSDEYPIMNISHAIGIVCYELAHLQR
GEYLLANKTEMNALYAHIERFLEGIQHPIEKRETTVLLARRVLGRTRLTVREASTLHGIMRRTEWHLKHPGQAYDAEDRE
YWPGDED

Specific function: Unknown

COG id: COG0565

COG function: function code J; rRNA methylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RNA methyltransferase TrmH family [H]

Homologues:

Organism=Escherichia coli, GI1788881, Length=243, Percent_Identity=31.2757201646091, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1790865, Length=163, Percent_Identity=32.5153374233129, Blast_Score=84, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004384
- InterPro:   IPR001537 [H]

Pfam domain/function: PF00588 SpoU_methylase [H]

EC number: 2.1.1.- [C]

Molecular weight: Translated: 28247; Mature: 28116

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQIDIVLVEPLYEGNIGFAARVMKNFGFHNMVLVNPPKLTMECTARSSHAKDVLENAER
CCCEEEEEECCEECCCCHHHHHHHHHCCCCCEEEECCCCEEEEECCCCHHHHHHHHHHHH
ISLEEVFARSDLCIATTGGLSKSVSNPMRMPYYSVAELREMIEGIDGRISILFGRENWGL
CCHHHHHHCCCEEEEECCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCC
NNEEIAKCDIVCTIPTSDEYPIMNISHAIGIVCYELAHLQRGEYLLANKTEMNALYAHIE
CCCCEEEEEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHH
RFLEGIQHPIEKRETTVLLARRVLGRTRLTVREASTLHGIMRRTEWHLKHPGQAYDAEDR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
EYWPGDED
CCCCCCCC
>Mature Secondary Structure 
PQIDIVLVEPLYEGNIGFAARVMKNFGFHNMVLVNPPKLTMECTARSSHAKDVLENAER
CCEEEEEECCEECCCCHHHHHHHHHCCCCCEEEECCCCEEEEECCCCHHHHHHHHHHHH
ISLEEVFARSDLCIATTGGLSKSVSNPMRMPYYSVAELREMIEGIDGRISILFGRENWGL
CCHHHHHHCCCEEEEECCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCC
NNEEIAKCDIVCTIPTSDEYPIMNISHAIGIVCYELAHLQRGEYLLANKTEMNALYAHIE
CCCCEEEEEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHH
RFLEGIQHPIEKRETTVLLARRVLGRTRLTVREASTLHGIMRRTEWHLKHPGQAYDAEDR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
EYWPGDED
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]