| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is fepC [C]
Identifier: 124485862
GI number: 124485862
Start: 1052576
End: 1053358
Strand: Reverse
Name: fepC [C]
Synonym: Mlab_1042
Alternate gene names: 124485862
Gene position: 1053358-1052576 (Counterclockwise)
Preceding gene: 124485863
Following gene: 124485861
Centisome position: 58.36
GC content: 40.74
Gene sequence:
>783_bases ATGAAACTAACTATTCAAAATGGCGGCTTTGGTTATCATGATGAGTATTTATTTAAAAACATTAATTTCACGGTGAATGA CCAAGAGGTCTTCGCAATTCTCGGACCAAACGGCATTGGAAAAACAACGTTACTGAAATGTATCATGAATATGCTTCCTT GGAAACAAGGAAATGCATATCTGGATAAAACCGACATTTCAACACTGCCTTCCAAAGAATTCTGGAAGCAGGTATCTTAT GTTCCTCAGGCAAAATCATCGGCATTCAATTATCTTGTTCGTGACATGATTATGCTTGGACGAAGTGCCCATCTTCCTAT TTTCAAAGAACCAGGGGATGCCGACATGGAAATAACCGAACGTGCCATGGAGACTCTTGGAATATCACATTTAGCGAACC GATCCTGTAGAACTCTTTCGGGGGGTGAGATGCAACTGGTTTTAATTGCCCGGGCACTTGCCACTGAGCCGAAAATATTG ATTATGGACGAACCGGAATCAAATCTGGATTATCACAACCAGCTCATGGTCCTTGAGAAAATACATGAGCTTTCAAAATC GATCTCCTGTATCATCAATACTCATTACCCGGAACATGCTTTGCGTATTTCTGACAAAGCATTGATGTTTCTCGGGAATG GAGAGAGCATCTGCGGCAATACTCCTGAGATAATTACAGAGCAACATCTTCGCGATGCATTTCGGGTGAATGTGATGATT GGAAATGTCTCTGACGGAACAAAAACCCACCAATACATATTACCAATATCCATTAGAAAATAA
Upstream 100 bases:
>100_bases GAACACTATCGCCCTCGGAAATCCCGTTATCTATTATGACGGCGTTGATTGGAGCTCCATTATTTGCATATCTCTTTCTT AAAAAAGCGAGGTCATGGCT
Downstream 100 bases:
>100_bases GGAGCTATGAATGAAAAAAATTGCATTTTATGGTAAAGGCGGAATCGGAAAATCAACCTGTGTCTCAAATATTTCTATGG CTCTCGCCGAGCAGGGATTC
Product: hypothetical protein
Products: ADP; phosphate; ferric enterobactin [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MKLTIQNGGFGYHDEYLFKNINFTVNDQEVFAILGPNGIGKTTLLKCIMNMLPWKQGNAYLDKTDISTLPSKEFWKQVSY VPQAKSSAFNYLVRDMIMLGRSAHLPIFKEPGDADMEITERAMETLGISHLANRSCRTLSGGEMQLVLIARALATEPKIL IMDEPESNLDYHNQLMVLEKIHELSKSISCIINTHYPEHALRISDKALMFLGNGESICGNTPEIITEQHLRDAFRVNVMI GNVSDGTKTHQYILPISIRK
Sequences:
>Translated_260_residues MKLTIQNGGFGYHDEYLFKNINFTVNDQEVFAILGPNGIGKTTLLKCIMNMLPWKQGNAYLDKTDISTLPSKEFWKQVSY VPQAKSSAFNYLVRDMIMLGRSAHLPIFKEPGDADMEITERAMETLGISHLANRSCRTLSGGEMQLVLIARALATEPKIL IMDEPESNLDYHNQLMVLEKIHELSKSISCIINTHYPEHALRISDKALMFLGNGESICGNTPEIITEQHLRDAFRVNVMI GNVSDGTKTHQYILPISIRK >Mature_260_residues MKLTIQNGGFGYHDEYLFKNINFTVNDQEVFAILGPNGIGKTTLLKCIMNMLPWKQGNAYLDKTDISTLPSKEFWKQVSY VPQAKSSAFNYLVRDMIMLGRSAHLPIFKEPGDADMEITERAMETLGISHLANRSCRTLSGGEMQLVLIARALATEPKIL IMDEPESNLDYHNQLMVLEKIHELSKSISCIINTHYPEHALRISDKALMFLGNGESICGNTPEIITEQHLRDAFRVNVMI GNVSDGTKTHQYILPISIRK
Specific function: Part Of The Binding-Protein-Dependent Transport System For Ferric Enterobactin. Probably Responsible For Energy Coupling To The Transport System. [C]
COG id: COG1120
COG function: function code PH; ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components
Gene ontology:
Cell location: Inner Membrane-Associated [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI9955963, Length=210, Percent_Identity=25.7142857142857, Blast_Score=75, Evalue=8e-14, Organism=Homo sapiens, GI46592915, Length=204, Percent_Identity=29.9019607843137, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI46592956, Length=204, Percent_Identity=29.9019607843137, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI46592898, Length=204, Percent_Identity=29.9019607843137, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI46592964, Length=204, Percent_Identity=29.9019607843137, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI46592978, Length=204, Percent_Identity=29.9019607843137, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI46592971, Length=204, Percent_Identity=29.9019607843137, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI9955968, Length=192, Percent_Identity=30.2083333333333, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI9955966, Length=192, Percent_Identity=30.2083333333333, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI45243524, Length=192, Percent_Identity=30.2083333333333, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI11967969, Length=222, Percent_Identity=31.0810810810811, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI105990541, Length=202, Percent_Identity=26.2376237623762, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI255708477, Length=187, Percent_Identity=26.7379679144385, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI153792144, Length=211, Percent_Identity=26.0663507109005, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI171184400, Length=190, Percent_Identity=26.3157894736842, Blast_Score=68, Evalue=8e-12, Organism=Homo sapiens, GI9665248, Length=235, Percent_Identity=27.2340425531915, Blast_Score=68, Evalue=8e-12, Organism=Homo sapiens, GI148612844, Length=191, Percent_Identity=26.1780104712042, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI116734710, Length=220, Percent_Identity=23.6363636363636, Blast_Score=65, Evalue=6e-11, Organism=Homo sapiens, GI4557481, Length=223, Percent_Identity=25.1121076233184, Blast_Score=65, Evalue=8e-11, Organism=Homo sapiens, GI27262624, Length=222, Percent_Identity=25.6756756756757, Blast_Score=65, Evalue=8e-11, Organism=Homo sapiens, GI27262626, Length=222, Percent_Identity=25.6756756756757, Blast_Score=65, Evalue=8e-11, Organism=Escherichia coli, GI1786803, Length=234, Percent_Identity=31.6239316239316, Blast_Score=122, Evalue=2e-29, Organism=Escherichia coli, GI1786345, Length=225, Percent_Identity=33.3333333333333, Blast_Score=112, Evalue=3e-26, Organism=Escherichia coli, GI1790739, Length=242, Percent_Identity=28.099173553719, Blast_Score=107, Evalue=7e-25, Organism=Escherichia coli, GI1789593, Length=239, Percent_Identity=31.3807531380753, Blast_Score=98, Evalue=4e-22, Organism=Escherichia coli, GI1788761, Length=221, Percent_Identity=32.1266968325792, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI87081791, Length=230, Percent_Identity=29.5652173913043, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI1787370, Length=213, Percent_Identity=32.3943661971831, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI1790162, Length=231, Percent_Identity=32.9004329004329, Blast_Score=91, Evalue=9e-20, Organism=Escherichia coli, GI1787112, Length=239, Percent_Identity=27.6150627615063, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI1788225, Length=211, Percent_Identity=32.2274881516588, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1789672, Length=226, Percent_Identity=28.3185840707965, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI87081834, Length=200, Percent_Identity=32.5, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI87081709, Length=198, Percent_Identity=30.3030303030303, Blast_Score=85, Evalue=6e-18, Organism=Escherichia coli, GI1788165, Length=228, Percent_Identity=23.6842105263158, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1790467, Length=213, Percent_Identity=27.6995305164319, Blast_Score=81, Evalue=6e-17, Organism=Escherichia coli, GI1786698, Length=199, Percent_Identity=30.1507537688442, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1786398, Length=212, Percent_Identity=28.3018867924528, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1786975, Length=228, Percent_Identity=27.1929824561404, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1789891, Length=224, Percent_Identity=31.6964285714286, Blast_Score=79, Evalue=2e-16, Organism=Escherichia coli, GI1787712, Length=202, Percent_Identity=30.6930693069307, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1788897, Length=208, Percent_Identity=28.8461538461538, Blast_Score=79, Evalue=4e-16, Organism=Escherichia coli, GI48994943, Length=244, Percent_Identity=29.0983606557377, Blast_Score=78, Evalue=6e-16, Organism=Escherichia coli, GI1787029, Length=215, Percent_Identity=29.3023255813954, Blast_Score=77, Evalue=8e-16, Organism=Escherichia coli, GI1789032, Length=230, Percent_Identity=28.2608695652174, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1786253, Length=218, Percent_Identity=31.1926605504587, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI87081782, Length=232, Percent_Identity=26.7241379310345, Blast_Score=75, Evalue=6e-15, Organism=Escherichia coli, GI1788053, Length=171, Percent_Identity=29.2397660818713, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1789864, Length=224, Percent_Identity=26.3392857142857, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI48995001, Length=217, Percent_Identity=26.2672811059908, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI87082267, Length=214, Percent_Identity=25.2336448598131, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1788450, Length=209, Percent_Identity=29.1866028708134, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI1786872, Length=216, Percent_Identity=28.7037037037037, Blast_Score=72, Evalue=5e-14, Organism=Escherichia coli, GI1787089, Length=237, Percent_Identity=27.8481012658228, Blast_Score=71, Evalue=9e-14, Organism=Escherichia coli, GI1790544, Length=200, Percent_Identity=24, Blast_Score=71, Evalue=9e-14, Organism=Escherichia coli, GI1786654, Length=203, Percent_Identity=26.1083743842365, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1786319, Length=187, Percent_Identity=28.8770053475936, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1788472, Length=205, Percent_Identity=28.2926829268293, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1787792, Length=179, Percent_Identity=28.4916201117318, Blast_Score=67, Evalue=9e-13, Organism=Escherichia coli, GI1789586, Length=255, Percent_Identity=25.0980392156863, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI87082268, Length=218, Percent_Identity=24.7706422018349, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1789873, Length=182, Percent_Identity=27.4725274725275, Blast_Score=66, Evalue=3e-12, Organism=Escherichia coli, GI1786653, Length=197, Percent_Identity=25.8883248730964, Blast_Score=64, Evalue=7e-12, Organism=Escherichia coli, GI1787500, Length=204, Percent_Identity=28.4313725490196, Blast_Score=64, Evalue=9e-12, Organism=Caenorhabditis elegans, GI17541710, Length=200, Percent_Identity=29, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI193211017, Length=267, Percent_Identity=23.9700374531835, Blast_Score=74, Evalue=6e-14, Organism=Caenorhabditis elegans, GI71996809, Length=264, Percent_Identity=24.6212121212121, Blast_Score=74, Evalue=6e-14, Organism=Caenorhabditis elegans, GI193211015, Length=267, Percent_Identity=23.9700374531835, Blast_Score=74, Evalue=7e-14, Organism=Caenorhabditis elegans, GI115533592, Length=189, Percent_Identity=29.1005291005291, Blast_Score=74, Evalue=8e-14, Organism=Caenorhabditis elegans, GI71992285, Length=204, Percent_Identity=25.4901960784314, Blast_Score=74, Evalue=9e-14, Organism=Caenorhabditis elegans, GI71984940, Length=189, Percent_Identity=29.1005291005291, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI193208177, Length=199, Percent_Identity=29.6482412060301, Blast_Score=71, Evalue=5e-13, Organism=Caenorhabditis elegans, GI17558664, Length=212, Percent_Identity=25, Blast_Score=71, Evalue=5e-13, Organism=Caenorhabditis elegans, GI17565938, Length=221, Percent_Identity=26.2443438914027, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI115535101, Length=242, Percent_Identity=25.6198347107438, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17569143, Length=183, Percent_Identity=27.3224043715847, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI212646699, Length=201, Percent_Identity=26.865671641791, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI115533608, Length=197, Percent_Identity=26.9035532994924, Blast_Score=68, Evalue=6e-12, Organism=Caenorhabditis elegans, GI17569145, Length=183, Percent_Identity=27.3224043715847, Blast_Score=67, Evalue=8e-12, Organism=Caenorhabditis elegans, GI17567269, Length=181, Percent_Identity=28.1767955801105, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI25146777, Length=209, Percent_Identity=24.4019138755981, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17543740, Length=177, Percent_Identity=26.5536723163842, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17559834, Length=201, Percent_Identity=25.3731343283582, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI71992290, Length=208, Percent_Identity=26.9230769230769, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17510237, Length=213, Percent_Identity=23.0046948356808, Blast_Score=65, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6323959, Length=231, Percent_Identity=29.4372294372294, Blast_Score=72, Evalue=7e-14, Organism=Saccharomyces cerevisiae, GI6322640, Length=242, Percent_Identity=27.2727272727273, Blast_Score=69, Evalue=6e-13, Organism=Saccharomyces cerevisiae, GI6324498, Length=234, Percent_Identity=25.2136752136752, Blast_Score=63, Evalue=5e-11, Organism=Drosophila melanogaster, GI28574150, Length=207, Percent_Identity=28.0193236714976, Blast_Score=78, Evalue=6e-15, Organism=Drosophila melanogaster, GI116007328, Length=207, Percent_Identity=28.0193236714976, Blast_Score=78, Evalue=7e-15, Organism=Drosophila melanogaster, GI21357907, Length=202, Percent_Identity=27.7227722772277, Blast_Score=73, Evalue=1e-13, Organism=Drosophila melanogaster, GI24659289, Length=229, Percent_Identity=25.764192139738, Blast_Score=71, Evalue=6e-13, Organism=Drosophila melanogaster, GI24650855, Length=209, Percent_Identity=30.622009569378, Blast_Score=70, Evalue=9e-13, Organism=Drosophila melanogaster, GI24650853, Length=209, Percent_Identity=30.622009569378, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI281362751, Length=209, Percent_Identity=30.622009569378, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI85725262, Length=221, Percent_Identity=24.8868778280543, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI17136662, Length=207, Percent_Identity=27.0531400966184, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI24650986, Length=200, Percent_Identity=27.5, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI21358185, Length=200, Percent_Identity=27.5, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24666836, Length=219, Percent_Identity=29.2237442922374, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI161076682, Length=203, Percent_Identity=26.1083743842365, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI161076684, Length=203, Percent_Identity=26.1083743842365, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24581617, Length=203, Percent_Identity=26.1083743842365, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24581615, Length=203, Percent_Identity=26.1083743842365, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI45552199, Length=241, Percent_Identity=26.1410788381743, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI19920532, Length=183, Percent_Identity=27.8688524590164, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI24580930, Length=183, Percent_Identity=27.8688524590164, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI24581407, Length=241, Percent_Identity=26.1410788381743, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI85726357, Length=189, Percent_Identity=25.3968253968254, Blast_Score=65, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 29315; Mature: 29315
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLTIQNGGFGYHDEYLFKNINFTVNDQEVFAILGPNGIGKTTLLKCIMNMLPWKQGNAY CEEEEECCCCCCCCHHHEECCCEEECCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCEE LDKTDISTLPSKEFWKQVSYVPQAKSSAFNYLVRDMIMLGRSAHLPIFKEPGDADMEITE EECCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHH RAMETLGISHLANRSCRTLSGGEMQLVLIARALATEPKILIMDEPESNLDYHNQLMVLEK HHHHHHHHHHHHCCCCCCCCCCCEEEEEEEHHHCCCCEEEEEECCCCCCCHHHHHHHHHH IHELSKSISCIINTHYPEHALRISDKALMFLGNGESICGNTPEIITEQHLRDAFRVNVMI HHHHHHHEEEEEECCCCCHHEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHEEEEEEEE GNVSDGTKTHQYILPISIRK ECCCCCCCCEEEEEEEEECC >Mature Secondary Structure MKLTIQNGGFGYHDEYLFKNINFTVNDQEVFAILGPNGIGKTTLLKCIMNMLPWKQGNAY CEEEEECCCCCCCCHHHEECCCEEECCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCEE LDKTDISTLPSKEFWKQVSYVPQAKSSAFNYLVRDMIMLGRSAHLPIFKEPGDADMEITE EECCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHH RAMETLGISHLANRSCRTLSGGEMQLVLIARALATEPKILIMDEPESNLDYHNQLMVLEK HHHHHHHHHHHHCCCCCCCCCCCEEEEEEEHHHCCCCEEEEEECCCCCCCHHHHHHHHHH IHELSKSISCIINTHYPEHALRISDKALMFLGNGESICGNTPEIITEQHLRDAFRVNVMI HHHHHHHEEEEEECCCCCHHEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHEEEEEEEE GNVSDGTKTHQYILPISIRK ECCCCCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; ferric enterobactin [Periplasm]; H2O [C]
Specific reaction: ATP + ferric enterobactin [Periplasm] + H2O = ADP + phosphate + ferric enterobactin [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]