| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485830
Identifier: 124485830
GI number: 124485830
Start: 1011175
End: 1011480
Strand: Reverse
Name: 124485830
Synonym: Mlab_1010
Alternate gene names: NA
Gene position: 1011480-1011175 (Counterclockwise)
Preceding gene: 124485831
Following gene: 124485829
Centisome position: 56.04
GC content: 43.79
Gene sequence:
>306_bases ATGCCAGACTTTGGAAATCCCTTTGCCGGATTAAAAGAAAACCGGAAACTTACGCATGAAGAACTCGTACGTGCAATCCG TTTTATGATCTCGGCAGAATACGAAGCAATCCAACTTTATCAGCAGCTTGCCGAATCCATCGACAACAAACTTGCGATTG AGGTTCTTGAAGACATTGCGAATGAAGAGAAAGTCCATGCAGGTGAGTTTCTCCGATTACTGCACGAACTCGATCCGAAA GAATCCAGTTATTATCAGGAAGGAGCTGAGGAAGTCGAGGCTGAGATTAAGAAATTCAGGGGATAA
Upstream 100 bases:
>100_bases GTTTTATCAGGATACGGTAACGTATCCCGCATACATCAGGACGGAAAGGGAAAAATCTCAGACCTTTATCTTTATCAGTT TTGAATTGCTACATACTTTC
Downstream 100 bases:
>100_bases TTTTCCCCTCCGTCTCTTTTCGTAAACTATTATAACTTCTATCTCCAATAATTAAGAGCACTTTCTGTGCCTCAGTGGCC TAGCCCGGCATAGCGGCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: Rubrerythrin; Methyltransferase; Linocin/CFP29-Like Protein
Number of amino acids: Translated: 101; Mature: 100
Protein sequence:
>101_residues MPDFGNPFAGLKENRKLTHEELVRAIRFMISAEYEAIQLYQQLAESIDNKLAIEVLEDIANEEKVHAGEFLRLLHELDPK ESSYYQEGAEEVEAEIKKFRG
Sequences:
>Translated_101_residues MPDFGNPFAGLKENRKLTHEELVRAIRFMISAEYEAIQLYQQLAESIDNKLAIEVLEDIANEEKVHAGEFLRLLHELDPK ESSYYQEGAEEVEAEIKKFRG >Mature_100_residues PDFGNPFAGLKENRKLTHEELVRAIRFMISAEYEAIQLYQQLAESIDNKLAIEVLEDIANEEKVHAGEFLRLLHELDPKE SSYYQEGAEEVEAEIKKFRG
Specific function: Unknown
COG id: COG1633
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11682; Mature: 11551
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDFGNPFAGLKENRKLTHEELVRAIRFMISAEYEAIQLYQQLAESIDNKLAIEVLEDIA CCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NEEKVHAGEFLRLLHELDPKESSYYQEGAEEVEAEIKKFRG CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PDFGNPFAGLKENRKLTHEELVRAIRFMISAEYEAIQLYQQLAESIDNKLAIEVLEDIA CCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NEEKVHAGEFLRLLHELDPKESSYYQEGAEEVEAEIKKFRG CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA