| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is fhs
Identifier: 124485829
GI number: 124485829
Start: 1009057
End: 1010739
Strand: Reverse
Name: fhs
Synonym: Mlab_1009
Alternate gene names: 124485829
Gene position: 1010739-1009057 (Counterclockwise)
Preceding gene: 124485830
Following gene: 124485828
Centisome position: 56.0
GC content: 51.4
Gene sequence:
>1683_bases ATGGGGTGGAAATACTTGTTATCTGACATCGAAATTGCACAGCAGTGCAAAATGAAAAAAATCACTGAGATTGCCGCATC TCTCGACATTACGCCGGATGAACTCGAACTCTACGGATCGTACAAAGCAAAACTTGCTGATTCACTGGAAAAACGTCTGG CGGATAAACCAAACGGCAAACTGATCCTGGTGACGGCCATCAACCCGACGCCTGCCGGCGAGGGTAAGACCACGACAACA GTCGGTCTTGGTCAGGCGATGCCCAAGATCGGTAAAAAGGCAGTCATTGCACTTCGCGAACCATCTCTAGGTCCCGTATT CGGTGTTAAAGGCGGAGCTGCCGGCGGGGGATACTCGCAAGTCGTCCCGATGGAAGACATCAATCTCCACTTCACCGGAG ATTTCCATGCGATTACCAGCGCAAACAACCTCTTGTGTGCTATGATCGACAATCATATCCAGCAGGGGAATGCGCTCGAC ATTGATACCCGCCGTATCATCTTCAAGCGCTGTCTGGATATGAACGATCGTGCTCTTCGAAACATCATCATCGGGCTTGG CGGTCAGACCAACGGCGTTCCGCGTGAGGATCACTTTATGATCACGGTCGCAAGCGAGGTAATGGCGATTCTCTGTCTTG CAAATGATATCGACGACCTTAAAGAGCGTTTGGGGAATGTCATTTTTGGCTACAGCAGAAAAGGAACTCCTCTCTATGCC CGTGATCTGAAGGCCGTCGGGGCTATGGCCGCCCTTCTCAAGGATGCCATCAAACCGAATCTTGTCCAGACGCTGGAAAA CACCCCCTGTTTTATCCACGGCGGACCGTTTGCCAACATCGCACACGGCTGCAATTCGGTTCGTGCAACAAAACTTTCGC TGAAGATGGCAGATTATGTCATCACGGAGGCGGGTTTCGGTTCTGATCTTGGTGCTGAAAAGTTCTTCGACATCAAATGC CGGTATGCGGGCCTGACGCCGAATACTGTTGTTCTGGTGGCCACCGTTCGGGCACTGAAATACAATGGCGGTGTAAAGAA AGAGGACACCACGATTCCAAACGTTGCTGCGCTCAAAGCAGGAATGGTCAATCTTGAGGCGCACATACAGAACCTCCAGA CGTTTGGGGTTCCGGTTGTTGTGGCGATCAACCGGTTCTCTACCGATACGGACGAAGAACTTGCCGTGCTTAAAGAATTC TGCACAGCGCAGGGAGCCGAGTTTGCAATCTCGGAAGTCTTTGCCAAAGGTGGGGAAGGTGGCGTTGAACTGGCGAAAAA AGTCGTTGCCTCCTGCGAGAAGCCGCAGAAGTTCCAGTGTCTCTACGAACTGAATACACCGATAAAAGAGAAGATCAATG CTCTCGCGACCCGGATATACGGAGCTGACGGGGTCGTTTACTCTCCTGCCGCCGATGCTGCAATCAAAGATATCGATGCT CTTGGCAGAAGCAATCTGCCGATCTGTATGGCAAAGACCCAGTACTCGCTCTCCGATGATCCAAATAAACTCGGCAGACC GAAGAACTTTGTTATTAACGCAGCAACGGTCAGGCTCTGTAATGGTGCCGGATTTATCGTTGTCGAGACCGGAGACATCA TGACGCTCCCGGGACTGCCGGCTGTACCTGCAGCATGTTCGATCGACGTAAACAATGATGGATATATCTCCGGTCTCTTC TGA
Upstream 100 bases:
>100_bases TCTCATCTTAGTGTGGCAACTTAGATGCTTATATATAAGATAAGTTTAAGAGTAGTTAACAACATTTGGAGATAGCCCCT CTGCTATCTCCTAAGGCTAC
Downstream 100 bases:
>100_bases TTGACTGAAGGTTATACTCATCAGGACAATCCGCCCCAAAATTTCCTTTTTCTCTCCTATTGAAAATATATTTTATCTTG ATCTGACCATTTTCCTGAAT
Product: formate-tetrahydrofolate ligase
Products: NA
Alternate protein names: Formyltetrahydrofolate synthetase; FHS; FTHFS
Number of amino acids: Translated: 560; Mature: 559
Protein sequence:
>560_residues MGWKYLLSDIEIAQQCKMKKITEIAASLDITPDELELYGSYKAKLADSLEKRLADKPNGKLILVTAINPTPAGEGKTTTT VGLGQAMPKIGKKAVIALREPSLGPVFGVKGGAAGGGYSQVVPMEDINLHFTGDFHAITSANNLLCAMIDNHIQQGNALD IDTRRIIFKRCLDMNDRALRNIIIGLGGQTNGVPREDHFMITVASEVMAILCLANDIDDLKERLGNVIFGYSRKGTPLYA RDLKAVGAMAALLKDAIKPNLVQTLENTPCFIHGGPFANIAHGCNSVRATKLSLKMADYVITEAGFGSDLGAEKFFDIKC RYAGLTPNTVVLVATVRALKYNGGVKKEDTTIPNVAALKAGMVNLEAHIQNLQTFGVPVVVAINRFSTDTDEELAVLKEF CTAQGAEFAISEVFAKGGEGGVELAKKVVASCEKPQKFQCLYELNTPIKEKINALATRIYGADGVVYSPAADAAIKDIDA LGRSNLPICMAKTQYSLSDDPNKLGRPKNFVINAATVRLCNGAGFIVVETGDIMTLPGLPAVPAACSIDVNNDGYISGLF
Sequences:
>Translated_560_residues MGWKYLLSDIEIAQQCKMKKITEIAASLDITPDELELYGSYKAKLADSLEKRLADKPNGKLILVTAINPTPAGEGKTTTT VGLGQAMPKIGKKAVIALREPSLGPVFGVKGGAAGGGYSQVVPMEDINLHFTGDFHAITSANNLLCAMIDNHIQQGNALD IDTRRIIFKRCLDMNDRALRNIIIGLGGQTNGVPREDHFMITVASEVMAILCLANDIDDLKERLGNVIFGYSRKGTPLYA RDLKAVGAMAALLKDAIKPNLVQTLENTPCFIHGGPFANIAHGCNSVRATKLSLKMADYVITEAGFGSDLGAEKFFDIKC RYAGLTPNTVVLVATVRALKYNGGVKKEDTTIPNVAALKAGMVNLEAHIQNLQTFGVPVVVAINRFSTDTDEELAVLKEF CTAQGAEFAISEVFAKGGEGGVELAKKVVASCEKPQKFQCLYELNTPIKEKINALATRIYGADGVVYSPAADAAIKDIDA LGRSNLPICMAKTQYSLSDDPNKLGRPKNFVINAATVRLCNGAGFIVVETGDIMTLPGLPAVPAACSIDVNNDGYISGLF >Mature_559_residues GWKYLLSDIEIAQQCKMKKITEIAASLDITPDELELYGSYKAKLADSLEKRLADKPNGKLILVTAINPTPAGEGKTTTTV GLGQAMPKIGKKAVIALREPSLGPVFGVKGGAAGGGYSQVVPMEDINLHFTGDFHAITSANNLLCAMIDNHIQQGNALDI DTRRIIFKRCLDMNDRALRNIIIGLGGQTNGVPREDHFMITVASEVMAILCLANDIDDLKERLGNVIFGYSRKGTPLYAR DLKAVGAMAALLKDAIKPNLVQTLENTPCFIHGGPFANIAHGCNSVRATKLSLKMADYVITEAGFGSDLGAEKFFDIKCR YAGLTPNTVVLVATVRALKYNGGVKKEDTTIPNVAALKAGMVNLEAHIQNLQTFGVPVVVAINRFSTDTDEELAVLKEFC TAQGAEFAISEVFAKGGEGGVELAKKVVASCEKPQKFQCLYELNTPIKEKINALATRIYGADGVVYSPAADAAIKDIDAL GRSNLPICMAKTQYSLSDDPNKLGRPKNFVINAATVRLCNGAGFIVVETGDIMTLPGLPAVPAACSIDVNNDGYISGLF
Specific function: Unknown
COG id: COG2759
COG function: function code F; Formyltetrahydrofolate synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the formate--tetrahydrofolate ligase family
Homologues:
Organism=Homo sapiens, GI222136639, Length=618, Percent_Identity=43.6893203883495, Blast_Score=470, Evalue=1e-132, Organism=Homo sapiens, GI36796743, Length=619, Percent_Identity=44.9111470113086, Blast_Score=459, Evalue=1e-129, Organism=Homo sapiens, GI310124614, Length=80, Percent_Identity=45, Blast_Score=71, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17568737, Length=624, Percent_Identity=42.1474358974359, Blast_Score=435, Evalue=1e-122, Organism=Caenorhabditis elegans, GI17568739, Length=624, Percent_Identity=42.1474358974359, Blast_Score=435, Evalue=1e-122, Organism=Saccharomyces cerevisiae, GI6319558, Length=630, Percent_Identity=42.3809523809524, Blast_Score=452, Evalue=1e-128, Organism=Saccharomyces cerevisiae, GI6321643, Length=625, Percent_Identity=43.52, Blast_Score=450, Evalue=1e-127, Organism=Drosophila melanogaster, GI62472483, Length=619, Percent_Identity=42.4878836833603, Blast_Score=462, Evalue=1e-130, Organism=Drosophila melanogaster, GI45551871, Length=619, Percent_Identity=42.4878836833603, Blast_Score=462, Evalue=1e-130, Organism=Drosophila melanogaster, GI24645718, Length=619, Percent_Identity=42.4878836833603, Blast_Score=462, Evalue=1e-130, Organism=Drosophila melanogaster, GI17137370, Length=619, Percent_Identity=42.4878836833603, Blast_Score=462, Evalue=1e-130,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): FTHS_METLZ (A2SS72)
Other databases:
- EMBL: CP000559 - RefSeq: YP_001030445.1 - ProteinModelPortal: A2SS72 - SMR: A2SS72 - STRING: A2SS72 - GeneID: 4794627 - GenomeReviews: CP000559_GR - KEGG: mla:Mlab_1009 - eggNOG: arNOG06240 - HOGENOM: HBG677721 - OMA: KMPGLPK - PhylomeDB: A2SS72 - BioCyc: MLAB410358:MLAB_1009-MONOMER - HAMAP: MF_01543 - InterPro: IPR000559 - InterPro: IPR020628
Pfam domain/function: PF01268 FTHFS
EC number: =6.3.4.3
Molecular weight: Translated: 59859; Mature: 59728
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: PS00721 FTHFS_1; PS00722 FTHFS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGWKYLLSDIEIAQQCKMKKITEIAASLDITPDELELYGSYKAKLADSLEKRLADKPNGK CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCC LILVTAINPTPAGEGKTTTTVGLGQAMPKIGKKAVIALREPSLGPVFGVKGGAAGGGYSQ EEEEEEECCCCCCCCCCEEEEECHHHHHHCCCEEEEEEECCCCCCEEECCCCCCCCCCCE VVPMEDINLHFTGDFHAITSANNLLCAMIDNHIQQGNALDIDTRRIIFKRCLDMNDRALR ECCCCCCEEEEECCEEEECCCCCEEEEEHHHHHCCCCEECCHHHHHHHHHHCCCCHHHHH NIIIGLGGQTNGVPREDHFMITVASEVMAILCLANDIDDLKERLGNVIFGYSRKGTPLYA HEEEECCCCCCCCCCCCCEEEEEHHHHHHHHHHHCCHHHHHHHHCCEEEECCCCCCCHHH RDLKAVGAMAALLKDAIKPNLVQTLENTPCFIHGGPFANIAHGCNSVRATKLSLKMADYV HHHHHHHHHHHHHHHHCCCHHHHHHCCCCEEEECCCHHHHHHCCCCCEEEEEEEEHHHHE ITEAGFGSDLGAEKFFDIKCRYAGLTPNTVVLVATVRALKYNGGVKKEDTTIPNVAALKA EECCCCCCCCCCCCEEEEEEEEECCCCCCEEEEEEEHHHHCCCCCCCCCCCCCCHHHHHH GMVNLEAHIQNLQTFGVPVVVAINRFSTDTDEELAVLKEFCTAQGAEFAISEVFAKGGEG CCEEHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCC GVELAKKVVASCEKPQKFQCLYELNTPIKEKINALATRIYGADGVVYSPAADAAIKDIDA HHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHH LGRSNLPICMAKTQYSLSDDPNKLGRPKNFVINAATVRLCNGAGFIVVETGDIMTLPGLP CCCCCCCEEEEECCCCCCCCHHHHCCCCCEEEEEEEEEEECCCCEEEEECCCEEECCCCC AVPAACSIDVNNDGYISGLF CCCCEEEEEECCCCEEEECC >Mature Secondary Structure GWKYLLSDIEIAQQCKMKKITEIAASLDITPDELELYGSYKAKLADSLEKRLADKPNGK CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCC LILVTAINPTPAGEGKTTTTVGLGQAMPKIGKKAVIALREPSLGPVFGVKGGAAGGGYSQ EEEEEEECCCCCCCCCCEEEEECHHHHHHCCCEEEEEEECCCCCCEEECCCCCCCCCCCE VVPMEDINLHFTGDFHAITSANNLLCAMIDNHIQQGNALDIDTRRIIFKRCLDMNDRALR ECCCCCCEEEEECCEEEECCCCCEEEEEHHHHHCCCCEECCHHHHHHHHHHCCCCHHHHH NIIIGLGGQTNGVPREDHFMITVASEVMAILCLANDIDDLKERLGNVIFGYSRKGTPLYA HEEEECCCCCCCCCCCCCEEEEEHHHHHHHHHHHCCHHHHHHHHCCEEEECCCCCCCHHH RDLKAVGAMAALLKDAIKPNLVQTLENTPCFIHGGPFANIAHGCNSVRATKLSLKMADYV HHHHHHHHHHHHHHHHCCCHHHHHHCCCCEEEECCCHHHHHHCCCCCEEEEEEEEHHHHE ITEAGFGSDLGAEKFFDIKCRYAGLTPNTVVLVATVRALKYNGGVKKEDTTIPNVAALKA EECCCCCCCCCCCCEEEEEEEEECCCCCCEEEEEEEHHHHCCCCCCCCCCCCCCHHHHHH GMVNLEAHIQNLQTFGVPVVVAINRFSTDTDEELAVLKEFCTAQGAEFAISEVFAKGGEG CCEEHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCC GVELAKKVVASCEKPQKFQCLYELNTPIKEKINALATRIYGADGVVYSPAADAAIKDIDA HHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHH LGRSNLPICMAKTQYSLSDDPNKLGRPKNFVINAATVRLCNGAGFIVVETGDIMTLPGLP CCCCCCCEEEEECCCCCCCCHHHHCCCCCEEEEEEEEEEECCCCEEEEECCCEEECCCCC AVPAACSIDVNNDGYISGLF CCCCEEEEEECCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA