Click here to switch to the map view.

The map label for this gene is rbr [H]

Identifier: 124485819

GI number: 124485819

Start: 1001314

End: 1001856

Strand: Reverse

Name: rbr [H]

Synonym: Mlab_0999

Alternate gene names: 124485819

Gene position: 1001856-1001314 (Counterclockwise)

Preceding gene: 124485820

Following gene: 162319793

Centisome position: 55.51

GC content: 49.91

Gene sequence:

>543_bases
ATGTGTAACGTAAAAGGCACCAAAACCGAAGCAAACCTCGAGTTTGCCTTCGCAGGGGAGTCCAAAGCACGAAACAAGTA
CAACTATTATGCCTCCCAGGCCAGAAAAGAGGGATACAACCAGATCGCAGATCTCTTCGACGAGACCGCCGGCAATGAAA
AAGAACACGCAAAACTCTGGTTCAAGATTCTCCACGGCGGCGAAGTTCCCGACACCATAACAAATCTCCTTGACGCAGCA
GCCGGCGAACACGAAGAGTGGACGGAAATGTATGCCGGCTTTGCCGTTGTCGCCAAGGAAGAAGGGTTCGAGAAACTTGC
AAAAACCTTCGAAGGGGTTGCCGCAATCGAAAAATTACACGAAGAACGCTACAGAAAACTTCTCGCAAATATCAAAGAAG
GAAAAGTATTCGCCCGCCCGGAAAAACAGCAGTGGCACTGTGCAAACTGCGGCCACATCCATATCGGGGACAAAGCTCCG
GATGAATGCCCAGTCTGCAAACACCCGCAGGCATACTTCGAGATCAGAAAAACCAACTACTGA

Upstream 100 bases:

>100_bases
TTGTGATCCTGTGGGCGGATCATCAAAACTCCCTCCCCTCTTTTTTTTCAAAATTCCCCTGACAGAAACTCTTTTTACTC
TTTCTGCCTAAATACAGAGT

Downstream 100 bases:

>100_bases
TTTTTCCAAACTTTTTTTTCTCAGCCCGTCGTTGGACGAAGCTTTCCAAATCACGGGAAAAAAGAATTGATTCTCAGAAT
CCGAACACGAAAGCGAGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: RR [H]

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MCNVKGTKTEANLEFAFAGESKARNKYNYYASQARKEGYNQIADLFDETAGNEKEHAKLWFKILHGGEVPDTITNLLDAA
AGEHEEWTEMYAGFAVVAKEEGFEKLAKTFEGVAAIEKLHEERYRKLLANIKEGKVFARPEKQQWHCANCGHIHIGDKAP
DECPVCKHPQAYFEIRKTNY

Sequences:

>Translated_180_residues
MCNVKGTKTEANLEFAFAGESKARNKYNYYASQARKEGYNQIADLFDETAGNEKEHAKLWFKILHGGEVPDTITNLLDAA
AGEHEEWTEMYAGFAVVAKEEGFEKLAKTFEGVAAIEKLHEERYRKLLANIKEGKVFARPEKQQWHCANCGHIHIGDKAP
DECPVCKHPQAYFEIRKTNY
>Mature_180_residues
MCNVKGTKTEANLEFAFAGESKARNKYNYYASQARKEGYNQIADLFDETAGNEKEHAKLWFKILHGGEVPDTITNLLDAA
AGEHEEWTEMYAGFAVVAKEEGFEKLAKTFEGVAAIEKLHEERYRKLLANIKEGKVFARPEKQQWHCANCGHIHIGDKAP
DECPVCKHPQAYFEIRKTNY

Specific function: May provide oxidative stress protection via catalytic reduction of intracellular hydrogen peroxide [H]

COG id: COG1592

COG function: function code C; Rubrerythrin

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rubredoxin-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009040
- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR004039
- InterPro:   IPR003251 [H]

Pfam domain/function: PF02915 Rubrerythrin [H]

EC number: NA

Molecular weight: Translated: 20472; Mature: 20472

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS50903 RUBREDOXIN_LIKE ; PS50905 FERRITIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCNVKGTKTEANLEFAFAGESKARNKYNYYASQARKEGYNQIADLFDETAGNEKEHAKLW
CCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
FKILHGGEVPDTITNLLDAAAGEHEEWTEMYAGFAVVAKEEGFEKLAKTFEGVAAIEKLH
HHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHH
EERYRKLLANIKEGKVFARPEKQQWHCANCGHIHIGDKAPDECPVCKHPQAYFEIRKTNY
HHHHHHHHHHHHCCCEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHCCCC
>Mature Secondary Structure
MCNVKGTKTEANLEFAFAGESKARNKYNYYASQARKEGYNQIADLFDETAGNEKEHAKLW
CCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
FKILHGGEVPDTITNLLDAAAGEHEEWTEMYAGFAVVAKEEGFEKLAKTFEGVAAIEKLH
HHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHH
EERYRKLLANIKEGKVFARPEKQQWHCANCGHIHIGDKAPDECPVCKHPQAYFEIRKTNY
HHHHHHHHHHHHCCCEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1932032; 1657933; 8383040; 1958203; 2835096; 8646540; 10201393; 10968622; 12175244; 12459910 [H]