Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

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The map label for this gene is 124485820

Identifier: 124485820

GI number: 124485820

Start: 1001961

End: 1002494

Strand: Reverse

Name: 124485820

Synonym: Mlab_1000

Alternate gene names: NA

Gene position: 1002494-1001961 (Counterclockwise)

Preceding gene: 124485828

Following gene: 124485819

Centisome position: 55.54

GC content: 54.12

Gene sequence:

>534_bases
ATGGCGGTTATTCTTATCTGGGCCTGCTGTGTCGGCTGGGTCTATTTCGTTGCGTTAGGCGAACCGTTTTTTGTTCTGAT
CGGAGAGATTTCTCTCGGCGTTCTTGCTGCGATTGTGATCTTCGTTCTGATCTGGTCGCGTCTGTATTACGCCTCGGTCG
TGTATCATCTGAATGATACGGAGATGACCTGGAAACGCGGTGTCTGGTTTAGAAAGACCGGCATTGTCCCCTACAACCGT
ATCACGAACGTGGATATCGTTCAGGGCCCCGTGATGCGGATCTTCGGCATCTCGAATTTAAAAATCGAGACAGCCGGCGG
GAACTCCGGGAAGAACTCGGCCGAGATTCAGCTGGAAGGCATCGCCGATCCCGAGCCGCTGCGTGCCATGATCATGGATT
TCGTTCGCGGCAATGCCCCAAGCCCTGCGGCGACCGGCGTTGATTTCGGCAGACGTTCTGCTCCGGCAGATATGCAGGCA
CTTCTTGCCGAGGTCACGGCGATTCGAAAGCTTCTGGAAGCAGAGAGAAAATAA

Upstream 100 bases:

>100_bases
CTTATTGTATCTGCCGGTACATCTGTTTTTCATGGTTAAACTCGGTGAAGATTTTAAGCCGGCGGCGAAGTATACTTCGT
ATCTGGCACTTGCGAGCGTC

Downstream 100 bases:

>100_bases
GGTTTTGTGATCCTGTGGGCGGATCATCAAAACTCCCTCCCCTCTTTTTTTTCAAAATTCCCCTGACAGAAACTCTTTTT
ACTCTTTCTGCCTAAATACA

Product: hypothetical protein

Products: NA

Alternate protein names: Membrane-Flanked Domain Protein

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MAVILIWACCVGWVYFVALGEPFFVLIGEISLGVLAAIVIFVLIWSRLYYASVVYHLNDTEMTWKRGVWFRKTGIVPYNR
ITNVDIVQGPVMRIFGISNLKIETAGGNSGKNSAEIQLEGIADPEPLRAMIMDFVRGNAPSPAATGVDFGRRSAPADMQA
LLAEVTAIRKLLEAERK

Sequences:

>Translated_177_residues
MAVILIWACCVGWVYFVALGEPFFVLIGEISLGVLAAIVIFVLIWSRLYYASVVYHLNDTEMTWKRGVWFRKTGIVPYNR
ITNVDIVQGPVMRIFGISNLKIETAGGNSGKNSAEIQLEGIADPEPLRAMIMDFVRGNAPSPAATGVDFGRRSAPADMQA
LLAEVTAIRKLLEAERK
>Mature_176_residues
AVILIWACCVGWVYFVALGEPFFVLIGEISLGVLAAIVIFVLIWSRLYYASVVYHLNDTEMTWKRGVWFRKTGIVPYNRI
TNVDIVQGPVMRIFGISNLKIETAGGNSGKNSAEIQLEGIADPEPLRAMIMDFVRGNAPSPAATGVDFGRRSAPADMQAL
LAEVTAIRKLLEAERK

Specific function: Unknown

COG id: COG3428

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19518; Mature: 19387

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVILIWACCVGWVYFVALGEPFFVLIGEISLGVLAAIVIFVLIWSRLYYASVVYHLNDT
CHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
EMTWKRGVWFRKTGIVPYNRITNVDIVQGPVMRIFGISNLKIETAGGNSGKNSAEIQLEG
CCHHHCCCEEEECCCCCCCCCCCCEECCCCHHHHCCCCCEEEEECCCCCCCCCEEEEEEC
IADPEPLRAMIMDFVRGNAPSPAATGVDFGRRSAPADMQALLAEVTAIRKLLEAERK
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AVILIWACCVGWVYFVALGEPFFVLIGEISLGVLAAIVIFVLIWSRLYYASVVYHLNDT
HHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
EMTWKRGVWFRKTGIVPYNRITNVDIVQGPVMRIFGISNLKIETAGGNSGKNSAEIQLEG
CCHHHCCCEEEECCCCCCCCCCCCEECCCCHHHHCCCCCEEEEECCCCCCCCCEEEEEEC
IADPEPLRAMIMDFVRGNAPSPAATGVDFGRRSAPADMQALLAEVTAIRKLLEAERK
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA