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The map label for this gene is rfaB [C]

Identifier: 124485718

GI number: 124485718

Start: 886188

End: 887369

Strand: Reverse

Name: rfaB [C]

Synonym: Mlab_0896

Alternate gene names: 124485718

Gene position: 887369-886188 (Counterclockwise)

Preceding gene: 124485719

Following gene: 124485717

Centisome position: 49.16

GC content: 34.09

Gene sequence:

>1182_bases
ATGACTGACCTATTAATTCTTTTAGGATCGATAGAGGGGGGAGGGGCTGAAAGAGTTGCTGTAAGTTTGGCAAATTCTCT
TCCTACCTCTATATCTAACGAGTTAGTGATCATACATGAGTCTAAAATAAAATATAATGTAAATTCTCCTTATATTCTTT
TATCTGGAAAACAGATTTCAGGACTTGCTAGATTATGCAAATTTCCACTTGTTATTCTACGTTATATACTTTTACTGAGA
AAATATAATCCAAAGGTATCTCTATCTATTTTACCAGAGGATAATGTAGTTAATATAATTTCATCCCTGATTACTGGTGT
ACATCCCATAATTTCCTTTCATGGTATGCCTTCAAACAAAAATTGCCATATTTTTACACAAATATTAAAGAAGATTTCGA
TTTTTTTACTAAAAATAACTAATACATCTGCAATTGCTGTTTCAAATGGGGTGAAAAATGAGTTGGTGATATTATACGGT
GTGAATTATCAGAAGATTCATGTAATACATAATCCAATTGATGTTATTCAAATCAATAAATTATCATTAGAGGAGGTTAA
AACAGAAATCTTCAACCACAAAGTTAAAACAATTATCACTGTTGGCAGACTGTCTTCTGTCAAAGGCCAGTGGCATATTC
TTCGTGTTTTTGCTGAACTTAGAAGAACGATTCAGTGTAGACTAGTTCTTTGTGGAGAGGGGCCTGAATTAGAGTATCTT
ATGAATCTCACCATAGATTTGGGTGTTAAAGAGGACGTTGTATTTCTTGGGTGGTCTAAAAACCCATATAAATATGTTGC
AAGGGCGGATTTGTTTGTTCTGTCATCATTATCTGAAGCCCTTCCAAACGTCCTTGTAGAGGCTATGGCAGTTGGATGCC
CGGTTGTAGCGGCGAACTGCTCAGAGGGAATTGAAGAAATATTAGGCTTTGATAACTCGTGTGGATTCGTTACAAATAAA
ATGACCGGAATTTATCATGTTGCAGATGAACCATTGGATGAAGGTGAACTAAGTATGCTCTATTTTATACAAAAAATTCT
GTATAATCCCGATTTGCGCGAATCTATGTCACGAAGATGCAAGGAGCGGGCTCAGATGTTTGATTTGAATAGAGGAATTC
AAAAATATACCGATATGATTGATAAAATCAATAATTTAAATAGAAACTTTAAGAAAAATTGA

Upstream 100 bases:

>100_bases
TAGTTGGAGATTTCACCGATGAAGACACGGATTACCTCTATTGATATTATTACAATTCCATTTCATCTTGCTGATGTAGA
TATGATCTTGATGGTGTAGT

Downstream 100 bases:

>100_bases
GTGTTTATGTCTGGAGAAATAATATGATGATGAAATTGAGTCATAATCAGCAATTCAAAATAGGTATAATATTATATCTA
TTTCTAGTTGTATACTCCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 393; Mature: 392

Protein sequence:

>393_residues
MTDLLILLGSIEGGGAERVAVSLANSLPTSISNELVIIHESKIKYNVNSPYILLSGKQISGLARLCKFPLVILRYILLLR
KYNPKVSLSILPEDNVVNIISSLITGVHPIISFHGMPSNKNCHIFTQILKKISIFLLKITNTSAIAVSNGVKNELVILYG
VNYQKIHVIHNPIDVIQINKLSLEEVKTEIFNHKVKTIITVGRLSSVKGQWHILRVFAELRRTIQCRLVLCGEGPELEYL
MNLTIDLGVKEDVVFLGWSKNPYKYVARADLFVLSSLSEALPNVLVEAMAVGCPVVAANCSEGIEEILGFDNSCGFVTNK
MTGIYHVADEPLDEGELSMLYFIQKILYNPDLRESMSRRCKERAQMFDLNRGIQKYTDMIDKINNLNRNFKKN

Sequences:

>Translated_393_residues
MTDLLILLGSIEGGGAERVAVSLANSLPTSISNELVIIHESKIKYNVNSPYILLSGKQISGLARLCKFPLVILRYILLLR
KYNPKVSLSILPEDNVVNIISSLITGVHPIISFHGMPSNKNCHIFTQILKKISIFLLKITNTSAIAVSNGVKNELVILYG
VNYQKIHVIHNPIDVIQINKLSLEEVKTEIFNHKVKTIITVGRLSSVKGQWHILRVFAELRRTIQCRLVLCGEGPELEYL
MNLTIDLGVKEDVVFLGWSKNPYKYVARADLFVLSSLSEALPNVLVEAMAVGCPVVAANCSEGIEEILGFDNSCGFVTNK
MTGIYHVADEPLDEGELSMLYFIQKILYNPDLRESMSRRCKERAQMFDLNRGIQKYTDMIDKINNLNRNFKKN
>Mature_392_residues
TDLLILLGSIEGGGAERVAVSLANSLPTSISNELVIIHESKIKYNVNSPYILLSGKQISGLARLCKFPLVILRYILLLRK
YNPKVSLSILPEDNVVNIISSLITGVHPIISFHGMPSNKNCHIFTQILKKISIFLLKITNTSAIAVSNGVKNELVILYGV
NYQKIHVIHNPIDVIQINKLSLEEVKTEIFNHKVKTIITVGRLSSVKGQWHILRVFAELRRTIQCRLVLCGEGPELEYLM
NLTIDLGVKEDVVFLGWSKNPYKYVARADLFVLSSLSEALPNVLVEAMAVGCPVVAANCSEGIEEILGFDNSCGFVTNKM
TGIYHVADEPLDEGELSMLYFIQKILYNPDLRESMSRRCKERAQMFDLNRGIQKYTDMIDKINNLNRNFKKN

Specific function: Adds A Galactose Goup To A Glucose Group Of Lps. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 44088; Mature: 43957

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDLLILLGSIEGGGAERVAVSLANSLPTSISNELVIIHESKIKYNVNSPYILLSGKQIS
CCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECEEEEECCCCEEEEECCHHH
GLARLCKFPLVILRYILLLRKYNPKVSLSILPEDNVVNIISSLITGVHPIISFHGMPSNK
HHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
NCHIFTQILKKISIFLLKITNTSAIAVSNGVKNELVILYGVNYQKIHVIHNPIDVIQINK
CCHHHHHHHHHHHEEEEEECCCCEEEEECCCCCCEEEEEECCEEEEEEEECCCCEEEECC
LSLEEVKTEIFNHKVKTIITVGRLSSVKGQWHILRVFAELRRTIQCRLVLCGEGPELEYL
CCHHHHHHHHHCCHHHHEEEEHHHHCCCCCHHHHHHHHHHHHCEEEEEEEECCCCCEEEE
MNLTIDLGVKEDVVFLGWSKNPYKYVARADLFVLSSLSEALPNVLVEAMAVGCPVVAANC
EEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCH
SEGIEEILGFDNSCGFVTNKMTGIYHVADEPLDEGELSMLYFIQKILYNPDLRESMSRRC
HHHHHHHHCCCCCCCCEECCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHH
KERAQMFDLNRGIQKYTDMIDKINNLNRNFKKN
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TDLLILLGSIEGGGAERVAVSLANSLPTSISNELVIIHESKIKYNVNSPYILLSGKQIS
CCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECEEEEECCCCEEEEECCHHH
GLARLCKFPLVILRYILLLRKYNPKVSLSILPEDNVVNIISSLITGVHPIISFHGMPSNK
HHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
NCHIFTQILKKISIFLLKITNTSAIAVSNGVKNELVILYGVNYQKIHVIHNPIDVIQINK
CCHHHHHHHHHHHEEEEEECCCCEEEEECCCCCCEEEEEECCEEEEEEEECCCCEEEECC
LSLEEVKTEIFNHKVKTIITVGRLSSVKGQWHILRVFAELRRTIQCRLVLCGEGPELEYL
CCHHHHHHHHHCCHHHHEEEEHHHHCCCCCHHHHHHHHHHHHCEEEEEEEECCCCCEEEE
MNLTIDLGVKEDVVFLGWSKNPYKYVARADLFVLSSLSEALPNVLVEAMAVGCPVVAANC
EEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCH
SEGIEEILGFDNSCGFVTNKMTGIYHVADEPLDEGELSMLYFIQKILYNPDLRESMSRRC
HHHHHHHHCCCCCCCCEECCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHH
KERAQMFDLNRGIQKYTDMIDKINNLNRNFKKN
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Hexosyltransferases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]