Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

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The map label for this gene is 124485717

Identifier: 124485717

GI number: 124485717

Start: 884572

End: 886191

Strand: Reverse

Name: 124485717

Synonym: Mlab_0895

Alternate gene names: NA

Gene position: 886191-884572 (Counterclockwise)

Preceding gene: 124485718

Following gene: 124485716

Centisome position: 49.1

GC content: 30.43

Gene sequence:

>1620_bases
TTGAGTGTTTATGTCTGGAGAAATAATATGATGATGAAATTGAGTCATAATCAGCAATTCAAAATAGGTATAATATTATA
TCTATTTCTAGTTGTATACTCCTTCCTCTACACCTATGGGAATTCTGATGCTTTTCTTCCACAAAATATTGTTAGTTTTC
TAGACTTTGTATATTATGGTAATGGATTTCTTTCAACTGTGATTGGTTATCATTCTTTTGGAGCAATGATTTGTCTGATT
CTTGGGATTTCCCCTGATTCTCTATTAACTCTACCCATATCTATCATCCCATTATCAGCAATTGTGTGTCTTATATTGTA
TAGGATATCCAAAAATATTATTTTAGCAACAATATTAATGGGATGTTTATTTTGCTCTATTTCAACTTCAGATTATAACG
TGTATTGGATCCATACCATTGGTATGATTCTCTACTTCCTTATAATTTATCTTATATTTATGGACTTAGAGAATAAAATA
GGGGAAAATTCATATAAAAATTCAATATTCATCTGTTTAATAATTGTTCTTCTCTCATTAAATTATATCTCATACAATTA
TATGGCAATGGTATTTTCTCTTATATTTTGTTTTACAGCGGTAGTGCTAATTCAGTTCATCCGTGTGAAATTCTATAATT
TGGATATTCGCTATATTATTCCAAAATCACATATACTCCTCCTCATGATCATTTCAGGCCTTATGATATTCGAGTTAAAT
ACGTATTATTATATATTTTATAATGCTATCGGCACTATGAATGAATTCGGTATTTCAAGTATTGATAAATTTCTAATCTA
TGCTTATCAATTTCTTGGAGTTAGCGAGTCCGCTTCTATTTCTCCATTAGCACCATATTACTTCACATCAACATATGAAA
TCGCTATTCTTCAGATTTTACGTTTTACTACCTGTGCTTTAGTCATTATTATTTATGGTCATTGGCTGTTAAAAATATAT
TTAAGTAAAAATAAGACAATAGACTCAATTGATATTATTCTTATAACAATATTGCTGGGAATCATTATATTTATTTTGAC
ACGAATAATTCTAGTTGTAAACTTAGGTGCTTTGTTGATGCTAATCACCCCTTCTGTCCTCATCTTTGCAAGGGTGTGCA
CATTAAAACAAGATGTAAAGCTCAAAAAAATTGGGCAGGTGCTTGCGACGATATTTATTATTTTGACTGTTGTGTTGATA
GCATTTACATTTGTAACTAACCTAGATGAACCAAGTAAATTTGAATCATACCCGCAAATATCTGAAATCGGATTGTGGTC
TTATGTATATTCAACACAACCTATTTCTTCAGATGTGTATACGACAGGTGCAATTGGTTTGGCAATTATAACTAAAAATA
ATCCAATCCGTATTGGATTAATACGAGATAGTTACAGTGTTTTCACGGATGATTGTGATATTCTTCCTTTGCTAAAGGGA
AATTTAACGCCTGTAAATAAGGATATGGTTGTTAATTGGGGATTGCCACAGTTATCTGTTTCAAATAAGGATTGGGTTAC
TTTAATTCCTTGGAGAGTATATAAGCAAGAAATTATCTATAATTCTAACTATAATATTGTGTGTTCAAGTGGAGTAATTG
ATTATTTGGTCCCATCATAG

Upstream 100 bases:

>100_bases
GCAAGGAGCGGGCTCAGATGTTTGATTTGAATAGAGGAATTCAAAAATATACCGATATGATTGATAAAATCAATAATTTA
AATAGAAACTTTAAGAAAAA

Downstream 100 bases:

>100_bases
GTTGTGTTTTGCCCACCTAATTCATTGAAATATTGAAAATATGAAACGTTTAGCATGTCCGAGAAAACACTTGATATCCA
ATTTCAAAAGCAATTACCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 539; Mature: 538

Protein sequence:

>539_residues
MSVYVWRNNMMMKLSHNQQFKIGIILYLFLVVYSFLYTYGNSDAFLPQNIVSFLDFVYYGNGFLSTVIGYHSFGAMICLI
LGISPDSLLTLPISIIPLSAIVCLILYRISKNIILATILMGCLFCSISTSDYNVYWIHTIGMILYFLIIYLIFMDLENKI
GENSYKNSIFICLIIVLLSLNYISYNYMAMVFSLIFCFTAVVLIQFIRVKFYNLDIRYIIPKSHILLLMIISGLMIFELN
TYYYIFYNAIGTMNEFGISSIDKFLIYAYQFLGVSESASISPLAPYYFTSTYEIAILQILRFTTCALVIIIYGHWLLKIY
LSKNKTIDSIDIILITILLGIIIFILTRIILVVNLGALLMLITPSVLIFARVCTLKQDVKLKKIGQVLATIFIILTVVLI
AFTFVTNLDEPSKFESYPQISEIGLWSYVYSTQPISSDVYTTGAIGLAIITKNNPIRIGLIRDSYSVFTDDCDILPLLKG
NLTPVNKDMVVNWGLPQLSVSNKDWVTLIPWRVYKQEIIYNSNYNIVCSSGVIDYLVPS

Sequences:

>Translated_539_residues
MSVYVWRNNMMMKLSHNQQFKIGIILYLFLVVYSFLYTYGNSDAFLPQNIVSFLDFVYYGNGFLSTVIGYHSFGAMICLI
LGISPDSLLTLPISIIPLSAIVCLILYRISKNIILATILMGCLFCSISTSDYNVYWIHTIGMILYFLIIYLIFMDLENKI
GENSYKNSIFICLIIVLLSLNYISYNYMAMVFSLIFCFTAVVLIQFIRVKFYNLDIRYIIPKSHILLLMIISGLMIFELN
TYYYIFYNAIGTMNEFGISSIDKFLIYAYQFLGVSESASISPLAPYYFTSTYEIAILQILRFTTCALVIIIYGHWLLKIY
LSKNKTIDSIDIILITILLGIIIFILTRIILVVNLGALLMLITPSVLIFARVCTLKQDVKLKKIGQVLATIFIILTVVLI
AFTFVTNLDEPSKFESYPQISEIGLWSYVYSTQPISSDVYTTGAIGLAIITKNNPIRIGLIRDSYSVFTDDCDILPLLKG
NLTPVNKDMVVNWGLPQLSVSNKDWVTLIPWRVYKQEIIYNSNYNIVCSSGVIDYLVPS
>Mature_538_residues
SVYVWRNNMMMKLSHNQQFKIGIILYLFLVVYSFLYTYGNSDAFLPQNIVSFLDFVYYGNGFLSTVIGYHSFGAMICLIL
GISPDSLLTLPISIIPLSAIVCLILYRISKNIILATILMGCLFCSISTSDYNVYWIHTIGMILYFLIIYLIFMDLENKIG
ENSYKNSIFICLIIVLLSLNYISYNYMAMVFSLIFCFTAVVLIQFIRVKFYNLDIRYIIPKSHILLLMIISGLMIFELNT
YYYIFYNAIGTMNEFGISSIDKFLIYAYQFLGVSESASISPLAPYYFTSTYEIAILQILRFTTCALVIIIYGHWLLKIYL
SKNKTIDSIDIILITILLGIIIFILTRIILVVNLGALLMLITPSVLIFARVCTLKQDVKLKKIGQVLATIFIILTVVLIA
FTFVTNLDEPSKFESYPQISEIGLWSYVYSTQPISSDVYTTGAIGLAIITKNNPIRIGLIRDSYSVFTDDCDILPLLKGN
LTPVNKDMVVNWGLPQLSVSNKDWVTLIPWRVYKQEIIYNSNYNIVCSSGVIDYLVPS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61440; Mature: 61309

Theoretical pI: Translated: 7.85; Mature: 7.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVYVWRNNMMMKLSHNQQFKIGIILYLFLVVYSFLYTYGNSDAFLPQNIVSFLDFVYYG
CEEEEEECCEEEEECCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHC
NGFLSTVIGYHSFGAMICLILGISPDSLLTLPISIIPLSAIVCLILYRISKNIILATILM
CHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
GCLFCSISTSDYNVYWIHTIGMILYFLIIYLIFMDLENKIGENSYKNSIFICLIIVLLSL
HHHHHEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
NYISYNYMAMVFSLIFCFTAVVLIQFIRVKFYNLDIRYIIPKSHILLLMIISGLMIFELN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCHHHHHHHHHHCHHEEEEC
TYYYIFYNAIGTMNEFGISSIDKFLIYAYQFLGVSESASISPLAPYYFTSTYEIAILQIL
CEEEEEEECCCCHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCHHHHHHHHHH
RFTTCALVIIIYGHWLLKIYLSKNKTIDSIDIILITILLGIIIFILTRIILVVNLGALLM
HHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LITPSVLIFARVCTLKQDVKLKKIGQVLATIFIILTVVLIAFTFVTNLDEPSKFESYPQI
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCH
SEIGLWSYVYSTQPISSDVYTTGAIGLAIITKNNPIRIGLIRDSYSVFTDDCDILPLLKG
HHCCHHHHEEECCCCCCCCEECCCEEEEEEECCCCEEEEEEECCCCEECCCCCEEECCCC
NLTPVNKDMVVNWGLPQLSVSNKDWVTLIPWRVYKQEIIYNSNYNIVCSSGVIDYLVPS
CCCCCCCCEEEECCCCCCEECCCCCEEEECHHHHHHHHEECCCCCEEECCCCCHHCCCC
>Mature Secondary Structure 
SVYVWRNNMMMKLSHNQQFKIGIILYLFLVVYSFLYTYGNSDAFLPQNIVSFLDFVYYG
EEEEEECCEEEEECCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHC
NGFLSTVIGYHSFGAMICLILGISPDSLLTLPISIIPLSAIVCLILYRISKNIILATILM
CHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
GCLFCSISTSDYNVYWIHTIGMILYFLIIYLIFMDLENKIGENSYKNSIFICLIIVLLSL
HHHHHEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
NYISYNYMAMVFSLIFCFTAVVLIQFIRVKFYNLDIRYIIPKSHILLLMIISGLMIFELN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCHHHHHHHHHHCHHEEEEC
TYYYIFYNAIGTMNEFGISSIDKFLIYAYQFLGVSESASISPLAPYYFTSTYEIAILQIL
CEEEEEEECCCCHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCHHHHHHHHHH
RFTTCALVIIIYGHWLLKIYLSKNKTIDSIDIILITILLGIIIFILTRIILVVNLGALLM
HHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LITPSVLIFARVCTLKQDVKLKKIGQVLATIFIILTVVLIAFTFVTNLDEPSKFESYPQI
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCH
SEIGLWSYVYSTQPISSDVYTTGAIGLAIITKNNPIRIGLIRDSYSVFTDDCDILPLLKG
HHCCHHHHEEECCCCCCCCEECCCEEEEEEECCCCEEEEEEECCCCEECCCCCEEECCCC
NLTPVNKDMVVNWGLPQLSVSNKDWVTLIPWRVYKQEIIYNSNYNIVCSSGVIDYLVPS
CCCCCCCCEEEECCCCCCEECCCCCEEEECHHHHHHHHEECCCCCEEECCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA