| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485702
Identifier: 124485702
GI number: 124485702
Start: 868722
End: 869792
Strand: Reverse
Name: 124485702
Synonym: Mlab_0880
Alternate gene names: NA
Gene position: 869792-868722 (Counterclockwise)
Preceding gene: 124485703
Following gene: 124485701
Centisome position: 48.19
GC content: 44.16
Gene sequence:
>1071_bases ATGAAACATAATATTCTGACACTTCTTCTGGTGATCTTCCTCATAGCCGGAGGATCCTGCGGTTTTGCGGCTGCTGATGA GACGTATGACAACATCACATATCCTGCTGCCGATGAGGTGCTCGTGGAAGGTAATACCTCAGGTACCTATGCCGGGATCA TAGCAGGACTTTCAGCAGTTTCGGTATCTTTGAATAATTCGGCATCATCATTGATTGCGACCCCGGTGGATACGGGCAAT ATCAGTTTAGATCTTCAGATGCAGATTACGGAACTGCAGGTACTGCTTACGGAGATGAATGCCACATCTGTACCTTTAGA GAACCAAAATGAACTTGAAACAATCATTCTTAACGTAGAAAATGCGTCAGAATCATTGTCTAGAGATTCACCGGATTTTA TCCAGATCTCTGCCGACTTACAGAACGCCTCATCTGCAATTGACGGAGTAAGTGCGCAGATCGCAGCTCTTCAGACGGAG CAAAGTGTCACACCCACTGAATCACTGCAGGTAGAACCAACCGACACGCCGATGCAAAATGGATCCGTACCAGAAAGTCC TGATTATGATCTGGTAACTATATCATGGATTTCTGCAGGAGTTGCCATACTGCTTATCGTTGTCGGCCTCGTTATATGGA TAAAAAAACGGGCAAAGCGTGGTAAAATGGAGAATACCACTAAGATTCCAACGAGTGATGAAGCACCATTATTCACTACG GCAGATGATGGACCAGAACAAAATGAATCTTGGGAAACTCATGATATAGAAGATAATATGAGAGAATCCAACGGAGAAAC AGATACAGAAAAAGACCTGGAAAATACTCCGGTCAACCTGAGCCACGCCGAACAATTTAAACTCATAGCAGCATCGATCG CAGAAAGTCATGGGATTATGAAAAGTGATGCGCTCACCCCGCGTGATCTCTTGAAAATCACAGAAGGAACACCGCTCGTG AAAGAGTATGTGGAACTCTACGAACGTGTCAGATACTCAAAACATGCCAGTGTTTCCGATATCATCAGACTCAAAGAACT TGCTAAAATACTTCTGGAACAAAACGCATGA
Upstream 100 bases:
>100_bases ATGTCTACATATGAGTATCTGCATTACGCAAATGTGATTGTGACACGTGAACAAATGAAGAGAATGGAAACTCTTTCCAA ACTGATAATTGAGGGTTATA
Downstream 100 bases:
>100_bases GAAAACGAGTCATCATAGCCATCCTCCTAATCATCATCGTCGGACTAATAGCGACCGCACAGTTTGCCACGACCGATGAG GAATACAGCCGGTACAACAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 356; Mature: 356
Protein sequence:
>356_residues MKHNILTLLLVIFLIAGGSCGFAAADETYDNITYPAADEVLVEGNTSGTYAGIIAGLSAVSVSLNNSASSLIATPVDTGN ISLDLQMQITELQVLLTEMNATSVPLENQNELETIILNVENASESLSRDSPDFIQISADLQNASSAIDGVSAQIAALQTE QSVTPTESLQVEPTDTPMQNGSVPESPDYDLVTISWISAGVAILLIVVGLVIWIKKRAKRGKMENTTKIPTSDEAPLFTT ADDGPEQNESWETHDIEDNMRESNGETDTEKDLENTPVNLSHAEQFKLIAASIAESHGIMKSDALTPRDLLKITEGTPLV KEYVELYERVRYSKHASVSDIIRLKELAKILLEQNA
Sequences:
>Translated_356_residues MKHNILTLLLVIFLIAGGSCGFAAADETYDNITYPAADEVLVEGNTSGTYAGIIAGLSAVSVSLNNSASSLIATPVDTGN ISLDLQMQITELQVLLTEMNATSVPLENQNELETIILNVENASESLSRDSPDFIQISADLQNASSAIDGVSAQIAALQTE QSVTPTESLQVEPTDTPMQNGSVPESPDYDLVTISWISAGVAILLIVVGLVIWIKKRAKRGKMENTTKIPTSDEAPLFTT ADDGPEQNESWETHDIEDNMRESNGETDTEKDLENTPVNLSHAEQFKLIAASIAESHGIMKSDALTPRDLLKITEGTPLV KEYVELYERVRYSKHASVSDIIRLKELAKILLEQNA >Mature_356_residues MKHNILTLLLVIFLIAGGSCGFAAADETYDNITYPAADEVLVEGNTSGTYAGIIAGLSAVSVSLNNSASSLIATPVDTGN ISLDLQMQITELQVLLTEMNATSVPLENQNELETIILNVENASESLSRDSPDFIQISADLQNASSAIDGVSAQIAALQTE QSVTPTESLQVEPTDTPMQNGSVPESPDYDLVTISWISAGVAILLIVVGLVIWIKKRAKRGKMENTTKIPTSDEAPLFTT ADDGPEQNESWETHDIEDNMRESNGETDTEKDLENTPVNLSHAEQFKLIAASIAESHGIMKSDALTPRDLLKITEGTPLV KEYVELYERVRYSKHASVSDIIRLKELAKILLEQNA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38515; Mature: 38515
Theoretical pI: Translated: 4.03; Mature: 4.03
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHNILTLLLVIFLIAGGSCGFAAADETYDNITYPAADEVLVEGNTSGTYAGIIAGLSAV CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHE SVSLNNSASSLIATPVDTGNISLDLQMQITELQVLLTEMNATSVPLENQNELETIILNVE EEEECCCCCCEEECCCCCCCEEEEEEEEHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEC NASESLSRDSPDFIQISADLQNASSAIDGVSAQIAALQTEQSVTPTESLQVEPTDTPMQN CCHHHHCCCCCCEEEEEECHHHHHHHHCCCHHHHHHEECCCCCCCCCCEEECCCCCCCCC GSVPESPDYDLVTISWISAGVAILLIVVGLVIWIKKRAKRGKMENTTKIPTSDEAPLFTT CCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE ADDGPEQNESWETHDIEDNMRESNGETDTEKDLENTPVNLSHAEQFKLIAASIAESHGIM CCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCC KSDALTPRDLLKITEGTPLVKEYVELYERVRYSKHASVSDIIRLKELAKILLEQNA CCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKHNILTLLLVIFLIAGGSCGFAAADETYDNITYPAADEVLVEGNTSGTYAGIIAGLSAV CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHE SVSLNNSASSLIATPVDTGNISLDLQMQITELQVLLTEMNATSVPLENQNELETIILNVE EEEECCCCCCEEECCCCCCCEEEEEEEEHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEC NASESLSRDSPDFIQISADLQNASSAIDGVSAQIAALQTEQSVTPTESLQVEPTDTPMQN CCHHHHCCCCCCEEEEEECHHHHHHHHCCCHHHHHHEECCCCCCCCCCEEECCCCCCCCC GSVPESPDYDLVTISWISAGVAILLIVVGLVIWIKKRAKRGKMENTTKIPTSDEAPLFTT CCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE ADDGPEQNESWETHDIEDNMRESNGETDTEKDLENTPVNLSHAEQFKLIAASIAESHGIM CCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCC KSDALTPRDLLKITEGTPLVKEYVELYERVRYSKHASVSDIIRLKELAKILLEQNA CCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA