| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485703
Identifier: 124485703
GI number: 124485703
Start: 869782
End: 871509
Strand: Reverse
Name: 124485703
Synonym: Mlab_0881
Alternate gene names: NA
Gene position: 871509-869782 (Counterclockwise)
Preceding gene: 124485704
Following gene: 124485702
Centisome position: 48.28
GC content: 46.3
Gene sequence:
>1728_bases ATGAGGCAAAACCTCGCTGCAGCTGCCGCAATACTTGCCGTCATCGCTGTAGTAATGCTTGCAGCACTGCTTGCCGGAAG CGGCACGCTTCTCTACGCTGCCGAAGGAAACACCAGCACATCCGATCACACCGACCCCTCGTCGATAGCCGTCATGACCA CGGAAGAGGCCGAGACCATTCTGCCGTTGATGGAAGATATCATCGGCCTTTCCTACGACTCGGTTTATCAAATAAGTATT GATGATCCGGAATATGCTGCTCGCTATCTTGCCGCGTATGAAAACTCGGTCAGCCGCCTTGGCACTAACATCGTAAAAAT AAGTCTGACCAAAACCGACATCAACACGTACAAAAAGGAAGCTTCATCTCTCGACACCTCCATCCAGATCATCCTGAATG ATGTAGTGCGTCTCGAAGAGATCGACGAGTTAAAAAAACAATACGCTGCCGAAGGAAATATTCTCGGATCATTCAGTCTT GAAGCAGAATCACTCCTCATCCGAAACGAACTCGCCCTGACGGCAATGAACTACGCCGATTCTGCTGACATCATGGCACA GATCGCCGCATATTATGGATTAGACGTGAGTCAGCTGCAGGATTCAGTATTACTGATAAATCAGATCATTACTGATGCCA CCTCGGGGAAAATCACCATAACAACGGATTCATCGGGTAAACTCATCATCAAAGATACGTCCGGTTCAAGTATCAATACT GACACATCAGGCTTGATCACCCTTACAGTCTACCCGGTCAAAGGATACTACGGGGATAAAATCCTCGTCTCAGGTATCGC GAGTAACACAGGTTCAATATTATCAATTTATTGGGATACGAATCTCTGGGGTACTGTAGCAAAAGATACTGAAGGGGTCT TTGCAAAGAGCATGACGATCGGCCGGATATCCGAAGGAATCCATGCAGTCACCGTCCAGTCCGAAGGCATCACTTCAAAG CCGGTTTACATCACTATCCTTTCGAAGCCTTCGGTCGTTACGATTCTCAAAGATGAACAGGAAAACGGAGAGCTCCACCG AAAACTGACTCTCTACGGTTCTCTACGGACCGAAGACGATATCCCGGTCGTCGGAGCGCCTGTTACCGTCTACTCTGAGG ATCACATCAACATCGGTACAGGTATCACCAATGCAAACGGTATTTGGAACGTTTCTGCTGAACTCATTGATGGGGGTTAT GCTTTCTACGCGGTCTTCGATGATCCCTCGTTTCCGCTCGAAGGAAACACGAGCGAGCTGTATCCTGTCACGATCCTTAA TCCAACCATTTACTACATTATTTTGGCTATTATCGGCGGCGTGCTGATCATCCTGATAGTTCGCTTTGCCGTAAGAAGAA AACCATCTCAAAAGCAAACCGGTAAGGCAGGAATTATCCCGCAGCAAATCATCGCATCTGAGCCTGCGATTATCAAAGTG ATCAAAGAAATATTCAAAAATGAAAAAGATGCAGACGATCTGGACGAACTCCGCCGGATCTATACAACAACTGTTGTTTT TCTCGCATCAGTCGAACGTATCCAAAACATCGCTGTTCTGACCCCGAGGGAAATTCTGAAGGGCATAACCGTATCCACAG AATATATACGGGACTTTATGTCTACATATGAGTATCTGCATTACGCAAATGTGATTGTGACACGTGAACAAATGAAGAGA ATGGAAACTCTTTCCAAACTGATAATTGAGGGTTATAATGAAACATAA
Upstream 100 bases:
>100_bases TTCGGCCGAAAAGTGCACGCTGGCAGCGCCTGATTGGGATCGCCGGCGTCGGCATCTTTGCCGTCATCATCATCATGAAA ATCGTGGAGATCATCGCAAA
Downstream 100 bases:
>100_bases TATTCTGACACTTCTTCTGGTGATCTTCCTCATAGCCGGAGGATCCTGCGGTTTTGCGGCTGCTGATGAGACGTATGACA ACATCACATATCCTGCTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 575; Mature: 575
Protein sequence:
>575_residues MRQNLAAAAAILAVIAVVMLAALLAGSGTLLYAAEGNTSTSDHTDPSSIAVMTTEEAETILPLMEDIIGLSYDSVYQISI DDPEYAARYLAAYENSVSRLGTNIVKISLTKTDINTYKKEASSLDTSIQIILNDVVRLEEIDELKKQYAAEGNILGSFSL EAESLLIRNELALTAMNYADSADIMAQIAAYYGLDVSQLQDSVLLINQIITDATSGKITITTDSSGKLIIKDTSGSSINT DTSGLITLTVYPVKGYYGDKILVSGIASNTGSILSIYWDTNLWGTVAKDTEGVFAKSMTIGRISEGIHAVTVQSEGITSK PVYITILSKPSVVTILKDEQENGELHRKLTLYGSLRTEDDIPVVGAPVTVYSEDHINIGTGITNANGIWNVSAELIDGGY AFYAVFDDPSFPLEGNTSELYPVTILNPTIYYIILAIIGGVLIILIVRFAVRRKPSQKQTGKAGIIPQQIIASEPAIIKV IKEIFKNEKDADDLDELRRIYTTTVVFLASVERIQNIAVLTPREILKGITVSTEYIRDFMSTYEYLHYANVIVTREQMKR METLSKLIIEGYNET
Sequences:
>Translated_575_residues MRQNLAAAAAILAVIAVVMLAALLAGSGTLLYAAEGNTSTSDHTDPSSIAVMTTEEAETILPLMEDIIGLSYDSVYQISI DDPEYAARYLAAYENSVSRLGTNIVKISLTKTDINTYKKEASSLDTSIQIILNDVVRLEEIDELKKQYAAEGNILGSFSL EAESLLIRNELALTAMNYADSADIMAQIAAYYGLDVSQLQDSVLLINQIITDATSGKITITTDSSGKLIIKDTSGSSINT DTSGLITLTVYPVKGYYGDKILVSGIASNTGSILSIYWDTNLWGTVAKDTEGVFAKSMTIGRISEGIHAVTVQSEGITSK PVYITILSKPSVVTILKDEQENGELHRKLTLYGSLRTEDDIPVVGAPVTVYSEDHINIGTGITNANGIWNVSAELIDGGY AFYAVFDDPSFPLEGNTSELYPVTILNPTIYYIILAIIGGVLIILIVRFAVRRKPSQKQTGKAGIIPQQIIASEPAIIKV IKEIFKNEKDADDLDELRRIYTTTVVFLASVERIQNIAVLTPREILKGITVSTEYIRDFMSTYEYLHYANVIVTREQMKR METLSKLIIEGYNET >Mature_575_residues MRQNLAAAAAILAVIAVVMLAALLAGSGTLLYAAEGNTSTSDHTDPSSIAVMTTEEAETILPLMEDIIGLSYDSVYQISI DDPEYAARYLAAYENSVSRLGTNIVKISLTKTDINTYKKEASSLDTSIQIILNDVVRLEEIDELKKQYAAEGNILGSFSL EAESLLIRNELALTAMNYADSADIMAQIAAYYGLDVSQLQDSVLLINQIITDATSGKITITTDSSGKLIIKDTSGSSINT DTSGLITLTVYPVKGYYGDKILVSGIASNTGSILSIYWDTNLWGTVAKDTEGVFAKSMTIGRISEGIHAVTVQSEGITSK PVYITILSKPSVVTILKDEQENGELHRKLTLYGSLRTEDDIPVVGAPVTVYSEDHINIGTGITNANGIWNVSAELIDGGY AFYAVFDDPSFPLEGNTSELYPVTILNPTIYYIILAIIGGVLIILIVRFAVRRKPSQKQTGKAGIIPQQIIASEPAIIKV IKEIFKNEKDADDLDELRRIYTTTVVFLASVERIQNIAVLTPREILKGITVSTEYIRDFMSTYEYLHYANVIVTREQMKR METLSKLIIEGYNET
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62763; Mature: 62763
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQNLAAAAAILAVIAVVMLAALLAGSGTLLYAAEGNTSTSDHTDPSSIAVMTTEEAETI CCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCEEEEECCCHHHH LPLMEDIIGLSYDSVYQISIDDPEYAARYLAAYENSVSRLGTNIVKISLTKTDINTYKKE HHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCEEEEEEEEECHHHHHHHH ASSLDTSIQIILNDVVRLEEIDELKKQYAAEGNILGSFSLEAESLLIRNELALTAMNYAD HHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHEEEEECCCC SADIMAQIAAYYGLDVSQLQDSVLLINQIITDATSGKITITTDSSGKLIIKDTSGSSINT CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCCCCCC DTSGLITLTVYPVKGYYGDKILVSGIASNTGSILSIYWDTNLWGTVAKDTEGVFAKSMTI CCCCEEEEEEEEECCCCCCEEEEEEECCCCCCEEEEEEECCCCEEECCCCCCCEECCEEH GRISEGIHAVTVQSEGITSKPVYITILSKPSVVTILKDEQENGELHRKLTLYGSLRTEDD HHHCCCEEEEEEECCCCCCCCEEEEEECCCCEEEEEECCCCCCCEEEEEEEEECCCCCCC IPVVGAPVTVYSEDHINIGTGITNANGIWNVSAELIDGGYAFYAVFDDPSFPLEGNTSEL CCEECCCEEEEECCCEEECCCCCCCCCEEEEEHEEECCCEEEEEEECCCCCCCCCCCCCE YPVTILNPTIYYIILAIIGGVLIILIVRFAVRRKPSQKQTGKAGIIPQQIIASEPAIIKV EEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCHHHHH IKEIFKNEKDADDLDELRRIYTTTVVFLASVERIQNIAVLTPREILKGITVSTEYIRDFM HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEECHHHHHCCCCCCHHHHHHHH STYEYLHYANVIVTREQMKRMETLSKLIIEGYNET HHHHHHHHHHHEEEHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MRQNLAAAAAILAVIAVVMLAALLAGSGTLLYAAEGNTSTSDHTDPSSIAVMTTEEAETI CCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCEEEEECCCHHHH LPLMEDIIGLSYDSVYQISIDDPEYAARYLAAYENSVSRLGTNIVKISLTKTDINTYKKE HHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCEEEEEEEEECHHHHHHHH ASSLDTSIQIILNDVVRLEEIDELKKQYAAEGNILGSFSLEAESLLIRNELALTAMNYAD HHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHEEEEECCCC SADIMAQIAAYYGLDVSQLQDSVLLINQIITDATSGKITITTDSSGKLIIKDTSGSSINT CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCCCCCC DTSGLITLTVYPVKGYYGDKILVSGIASNTGSILSIYWDTNLWGTVAKDTEGVFAKSMTI CCCCEEEEEEEEECCCCCCEEEEEEECCCCCCEEEEEEECCCCEEECCCCCCCEECCEEH GRISEGIHAVTVQSEGITSKPVYITILSKPSVVTILKDEQENGELHRKLTLYGSLRTEDD HHHCCCEEEEEEECCCCCCCCEEEEEECCCCEEEEEECCCCCCCEEEEEEEEECCCCCCC IPVVGAPVTVYSEDHINIGTGITNANGIWNVSAELIDGGYAFYAVFDDPSFPLEGNTSEL CCEECCCEEEEECCCEEECCCCCCCCCEEEEEHEEECCCEEEEEEECCCCCCCCCCCCCE YPVTILNPTIYYIILAIIGGVLIILIVRFAVRRKPSQKQTGKAGIIPQQIIASEPAIIKV EEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCHHHHH IKEIFKNEKDADDLDELRRIYTTTVVFLASVERIQNIAVLTPREILKGITVSTEYIRDFM HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEECHHHHHCCCCCCHHHHHHHH STYEYLHYANVIVTREQMKRMETLSKLIIEGYNET HHHHHHHHHHHEEEHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA