| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485701
Identifier: 124485701
GI number: 124485701
Start: 867877
End: 868725
Strand: Reverse
Name: 124485701
Synonym: Mlab_0879
Alternate gene names: NA
Gene position: 868725-867877 (Counterclockwise)
Preceding gene: 124485702
Following gene: 124485700
Centisome position: 48.13
GC content: 48.53
Gene sequence:
>849_bases ATGAGAAAACGAGTCATCATAGCCATCCTCCTAATCATCATCGTCGGACTAATAGCGACCGCACAGTTTGCCACGACCGA TGAGGAATACAGCCGGTACAACATCAACTGGAACGGCACCTCCGATTTTTTCGGAATGGCAGCCGATAAACAGTGTGTTT ACAGCTATGATGATCTCCGCTCCGCGGAGTCGGGCAGCACACTCCTGATCATCGCACCCGGAACCGAGTTTACGGGCCTT GCCGACTACCTGTATCAGGGCAACACGGTCATAATCGCCGACCAGAGCGGGAATGCAAACATATTTCTTGAAGAGGTTGG CAGTTCTATTCGTGTCCATAATGAACCGGTCAGATCCACCAGCATGGAGTATAAGGACATGGGCATATTCCGAGGGACGG TCGAGGGAGATCTTTTCGGATCCAATGTCACGACCCTCACGTTCAACTACCCGGGGTATGTCACTGGGGGCGATGTCATC GCTTCCACCTCCTATCTCTCATGGATAGACACAAACGGAAACAATATCCCGGACAGCAATGAAACACTGAAAGTTTATTC ACTTATCGCATCAGAAAATATAGGTAATGGGCGTGTAGTCGTCATTGCCGACCCTTCGGTTTTTATCAACAGTATGCTTG TGCGTACTCATACCGAAAATATGCAGGTCATCGATGCTCTCATAAATGAAGACATAATAATTGACCAAACCAACTCAGCG ACGACTGATGGTGGTGGACTATGTCCTCTCCTTCAGATAATGCACAGATATCCCTCCATCGGCACTGCCCTGCTTACCAT CATTTTAATTCTTGCAGCCATAATCGGCATACGGAGAATCCGCCAATGA
Upstream 100 bases:
>100_bases ATGTGGAACTCTACGAACGTGTCAGATACTCAAAACATGCCAGTGTTTCCGATATCATCAGACTCAAAGAACTTGCTAAA ATACTTCTGGAACAAAACGC
Downstream 100 bases:
>100_bases CAGAACAGCAAAACATCGATAAAGTACATATATTTCACGAACAACTGAAAGAACAACTGCATAAATTCATCGTTGGCTAT GATAATCTTCTGGATCTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 282; Mature: 282
Protein sequence:
>282_residues MRKRVIIAILLIIIVGLIATAQFATTDEEYSRYNINWNGTSDFFGMAADKQCVYSYDDLRSAESGSTLLIIAPGTEFTGL ADYLYQGNTVIIADQSGNANIFLEEVGSSIRVHNEPVRSTSMEYKDMGIFRGTVEGDLFGSNVTTLTFNYPGYVTGGDVI ASTSYLSWIDTNGNNIPDSNETLKVYSLIASENIGNGRVVVIADPSVFINSMLVRTHTENMQVIDALINEDIIIDQTNSA TTDGGGLCPLLQIMHRYPSIGTALLTIILILAAIIGIRRIRQ
Sequences:
>Translated_282_residues MRKRVIIAILLIIIVGLIATAQFATTDEEYSRYNINWNGTSDFFGMAADKQCVYSYDDLRSAESGSTLLIIAPGTEFTGL ADYLYQGNTVIIADQSGNANIFLEEVGSSIRVHNEPVRSTSMEYKDMGIFRGTVEGDLFGSNVTTLTFNYPGYVTGGDVI ASTSYLSWIDTNGNNIPDSNETLKVYSLIASENIGNGRVVVIADPSVFINSMLVRTHTENMQVIDALINEDIIIDQTNSA TTDGGGLCPLLQIMHRYPSIGTALLTIILILAAIIGIRRIRQ >Mature_282_residues MRKRVIIAILLIIIVGLIATAQFATTDEEYSRYNINWNGTSDFFGMAADKQCVYSYDDLRSAESGSTLLIIAPGTEFTGL ADYLYQGNTVIIADQSGNANIFLEEVGSSIRVHNEPVRSTSMEYKDMGIFRGTVEGDLFGSNVTTLTFNYPGYVTGGDVI ASTSYLSWIDTNGNNIPDSNETLKVYSLIASENIGNGRVVVIADPSVFINSMLVRTHTENMQVIDALINEDIIIDQTNSA TTDGGGLCPLLQIMHRYPSIGTALLTIILILAAIIGIRRIRQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30783; Mature: 30783
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKRVIIAILLIIIVGLIATAQFATTDEEYSRYNINWNGTSDFFGMAADKQCVYSYDDLR CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEEEECCCCCCCCCCCCCCEEEEHHHHC SAESGSTLLIIAPGTEFTGLADYLYQGNTVIIADQSGNANIFLEEVGSSIRVHNEPVRST CCCCCCEEEEEECCCCCCHHHHHHCCCCEEEEEECCCCCEEEEECCCCEEEECCCCCCCC SMEYKDMGIFRGTVEGDLFGSNVTTLTFNYPGYVTGGDVIASTSYLSWIDTNGNNIPDSN CCCHHHCCEEEECCCCCEECCCEEEEEECCCCEEECCCEEECCCEEEEEECCCCCCCCCC ETLKVYSLIASENIGNGRVVVIADPSVFINSMLVRTHTENMQVIDALINEDIIIDQTNSA CCEEEEEEEECCCCCCCEEEEEECCHHHHHHHHEEECCCCHHHHHHHHCCCEEEECCCCC TTDGGGLCPLLQIMHRYPSIGTALLTIILILAAIIGIRRIRQ CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRKRVIIAILLIIIVGLIATAQFATTDEEYSRYNINWNGTSDFFGMAADKQCVYSYDDLR CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEEEECCCCCCCCCCCCCCEEEEHHHHC SAESGSTLLIIAPGTEFTGLADYLYQGNTVIIADQSGNANIFLEEVGSSIRVHNEPVRST CCCCCCEEEEEECCCCCCHHHHHHCCCCEEEEEECCCCCEEEEECCCCEEEECCCCCCCC SMEYKDMGIFRGTVEGDLFGSNVTTLTFNYPGYVTGGDVIASTSYLSWIDTNGNNIPDSN CCCHHHCCEEEECCCCCEECCCEEEEEECCCCEEECCCEEECCCEEEEEECCCCCCCCCC ETLKVYSLIASENIGNGRVVVIADPSVFINSMLVRTHTENMQVIDALINEDIIIDQTNSA CCEEEEEEEECCCCCCCEEEEEECCHHHHHHHHEEECCCCHHHHHHHHCCCEEEECCCCC TTDGGGLCPLLQIMHRYPSIGTALLTIILILAAIIGIRRIRQ CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA