| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is ilvE [H]
Identifier: 124485301
GI number: 124485301
Start: 451955
End: 452866
Strand: Reverse
Name: ilvE [H]
Synonym: Mlab_0476
Alternate gene names: 124485301
Gene position: 452866-451955 (Counterclockwise)
Preceding gene: 124485305
Following gene: 124485300
Centisome position: 25.09
GC content: 51.32
Gene sequence:
>912_bases ATGCATAGACCAAAATCCTATATCATACCACATCACATATTATTTATCATGTTAGTTTACATAAACGGGAAATTTGTGCC TGAAGAACAGGCAACCGTGTCAATTTTCGACCACGGATTCCTTTACGGAGACGGTGTGTTTGAAGGAATCAGAGCATACA ATGGTCGTGTGTTCCGCCTCAAAGAACACGTTGACCGTCTCTTCGACTCGGCTAAAGCCTTAGATCTTGATCCCGGGATC ACCCGCGCCGAGATGGCCGAGATCATCAAAGAGACTCTGCGCCAGAACAACCTGAAGGATGCCTACATCCGTCCGATCAT TACGCGTGGTGTCGGAACTATGGGACTCGACCCGCGTCACTGCGCAAACCCCTCGATCATCTGTGCTGCTTCAGCCTGGG GAGCAATGTACGGCGACCTCTATGAAACCGGTCTTACCGCGGTGACGGTCTGTGTGAGAAGAAACCCGCCGGACACTCTC CCGCCGAACATCAAATCCCTCAACTACCTGAACAACATTCTTGGTAAGATCGAGGCAAACTACAAGGGCGGCGACGAAGC CATCTTCCTTGATCGAACCGGAAAACTTGCAGAAGGTTCCGGCGACAACATCTATCTCATAAAAGACGGCGTTCTCTACA CTCCTCCGACCATCAACAACCTCAAAGGCATCACCCGCCTTGTCCTTCTCGACATCTGCGCGAAAATCGGGATCCGCTAC GAGATCTGCGAGCTCGGACTCTTTGATCTTTACACCGCCGACGAAGTCATGGTCACAGGAACGGCCGCAGAAATCTGCGC AATCACCAAAATAGACGGCAGAACGATCGGAACCGGCGTTCCAGGCCCAGTCTACAAAAAACTTCTTGCATCATTCCAGA CGGAGACTCAGAACTCCGGCGATGCATACTGA
Upstream 100 bases:
>100_bases TATTTGGCGGGGCCGGGATATCCTGAAAAATCACCCTGCATGAACCCTCGTTTTTTCCGACACTATCACCGAAATAAACG CATGAACGCCGGATTTTATC
Downstream 100 bases:
>100_bases TCCTGAAATCAAAAGGGATCAATCAAAATCTTTTTATAAATCAGCGTAGACTATTATAGGCAGTTTGAGCTGATATAGTG TAGAGGCCAATCATGCCGGC
Product: branched-chain amino acid aminotransferase
Products: NA
Alternate protein names: BCAT; Transaminase B [H]
Number of amino acids: Translated: 303; Mature: 303
Protein sequence:
>303_residues MHRPKSYIIPHHILFIMLVYINGKFVPEEQATVSIFDHGFLYGDGVFEGIRAYNGRVFRLKEHVDRLFDSAKALDLDPGI TRAEMAEIIKETLRQNNLKDAYIRPIITRGVGTMGLDPRHCANPSIICAASAWGAMYGDLYETGLTAVTVCVRRNPPDTL PPNIKSLNYLNNILGKIEANYKGGDEAIFLDRTGKLAEGSGDNIYLIKDGVLYTPPTINNLKGITRLVLLDICAKIGIRY EICELGLFDLYTADEVMVTGTAAEICAITKIDGRTIGTGVPGPVYKKLLASFQTETQNSGDAY
Sequences:
>Translated_303_residues MHRPKSYIIPHHILFIMLVYINGKFVPEEQATVSIFDHGFLYGDGVFEGIRAYNGRVFRLKEHVDRLFDSAKALDLDPGI TRAEMAEIIKETLRQNNLKDAYIRPIITRGVGTMGLDPRHCANPSIICAASAWGAMYGDLYETGLTAVTVCVRRNPPDTL PPNIKSLNYLNNILGKIEANYKGGDEAIFLDRTGKLAEGSGDNIYLIKDGVLYTPPTINNLKGITRLVLLDICAKIGIRY EICELGLFDLYTADEVMVTGTAAEICAITKIDGRTIGTGVPGPVYKKLLASFQTETQNSGDAY >Mature_303_residues MHRPKSYIIPHHILFIMLVYINGKFVPEEQATVSIFDHGFLYGDGVFEGIRAYNGRVFRLKEHVDRLFDSAKALDLDPGI TRAEMAEIIKETLRQNNLKDAYIRPIITRGVGTMGLDPRHCANPSIICAASAWGAMYGDLYETGLTAVTVCVRRNPPDTL PPNIKSLNYLNNILGKIEANYKGGDEAIFLDRTGKLAEGSGDNIYLIKDGVLYTPPTINNLKGITRLVLLDICAKIGIRY EICELGLFDLYTADEVMVTGTAAEICAITKIDGRTIGTGVPGPVYKKLLASFQTETQNSGDAY
Specific function: Acts on leucine, isoleucine and valine [H]
COG id: COG0115
COG function: function code EH; Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Escherichia coli, GI48994963, Length=281, Percent_Identity=39.8576512455516, Blast_Score=194, Evalue=7e-51, Organism=Escherichia coli, GI1787338, Length=248, Percent_Identity=27.0161290322581, Blast_Score=81, Evalue=1e-16,
Paralogues:
None
Copy number: 2342 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 11,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001544 - InterPro: IPR018300 - InterPro: IPR005785 [H]
Pfam domain/function: PF01063 Aminotran_4 [H]
EC number: =2.6.1.42 [H]
Molecular weight: Translated: 33408; Mature: 33408
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00770 AA_TRANSFER_CLASS_4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRPKSYIIPHHILFIMLVYINGKFVPEEQATVSIFDHGFLYGDGVFEGIRAYNGRVFRL CCCCCCCCCHHHHHHHHHHHHCCEECCCCCCEEEEEECCEEECCHHHHHHHHHCCEEEEH KEHVDRLFDSAKALDLDPGITRAEMAEIIKETLRQNNLKDAYIRPIITRGVGTMGLDPRH HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHH CANPSIICAASAWGAMYGDLYETGLTAVTVCVRRNPPDTLPPNIKSLNYLNNILGKIEAN CCCCCEEEEEHHHHHHHHHHHHHCHHHEEEEEECCCCCCCCCCHHHHHHHHHHHHHEECC YKGGDEAIFLDRTGKLAEGSGDNIYLIKDGVLYTPPTINNLKGITRLVLLDICAKIGIRY CCCCCCEEEEECCCCCCCCCCCEEEEEECCEEECCCCCCHHHHHHHHHHHHHHHHHCCEE EICELGLFDLYTADEVMVTGTAAEICAITKIDGRTIGTGVPGPVYKKLLASFQTETQNSG EHHHCCHHHEECCCCEEEECCHHHEEEEEEECCEEECCCCCCHHHHHHHHHHHHCCCCCC DAY CCC >Mature Secondary Structure MHRPKSYIIPHHILFIMLVYINGKFVPEEQATVSIFDHGFLYGDGVFEGIRAYNGRVFRL CCCCCCCCCHHHHHHHHHHHHCCEECCCCCCEEEEEECCEEECCHHHHHHHHHCCEEEEH KEHVDRLFDSAKALDLDPGITRAEMAEIIKETLRQNNLKDAYIRPIITRGVGTMGLDPRH HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHH CANPSIICAASAWGAMYGDLYETGLTAVTVCVRRNPPDTLPPNIKSLNYLNNILGKIEAN CCCCCEEEEEHHHHHHHHHHHHHCHHHEEEEEECCCCCCCCCCHHHHHHHHHHHHHEECC YKGGDEAIFLDRTGKLAEGSGDNIYLIKDGVLYTPPTINNLKGITRLVLLDICAKIGIRY CCCCCCEEEEECCCCCCCCCCCEEEEEECCEEECCCCCCHHHHHHHHHHHHHHHHHCCEE EICELGLFDLYTADEVMVTGTAAEICAITKIDGRTIGTGVPGPVYKKLLASFQTETQNSG EHHHCCHHHEECCCCEEEECCHHHEEEEEEECCEEECCCCCCHHHHHHHHHHHHCCCCCC DAY CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]