Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

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The map label for this gene is 124485300

Identifier: 124485300

GI number: 124485300

Start: 451420

End: 451740

Strand: Reverse

Name: 124485300

Synonym: Mlab_0475

Alternate gene names: NA

Gene position: 451740-451420 (Counterclockwise)

Preceding gene: 124485301

Following gene: 124485299

Centisome position: 25.03

GC content: 48.91

Gene sequence:

>321_bases
ATGACATTTCACCCCACAAACAACCCTGTCTTCTGGAAGACTACCGCAGACAATCTTCTCGCAGATGAGCGCTATGAAAA
AGCAGCGGAAGCCTACCTGAGATTAACGGAACTTCTGCCGAATGATGCTGAAGCCTGGAAAGGAAGAGGCACAGCCCTGA
TCGGTCTTGAAAAATACGGAGATGCCGTCAGCGCTTTGGAAAGAGCCCTGATTCTTCTGCCCGATGACAAACCCACCCTT
GAATTACTTGCCGAATGCTTTGACAAGCTTGGTGCTGTTGAGAAAAAAACGGCCTGCATTCTCCGAATCAACGATCTGTA
G

Upstream 100 bases:

>100_bases
ACTCGGGTTCGAATCCCGATATCAGCATTTATCGGCGGCACGGGTGTGCTGCCAAGTCAAACATGACCACGAGTCATGAG
TATTTTCCTGCAGTTTTATT

Downstream 100 bases:

>100_bases
AGCGTATCGGGAAGATATCCTTATCCTCTAAGACACCAAGAAAAATATATGCCCGATTTTCAGTGTCCAAAGTGCGGCGC
AGCACTTCAGGTCAAACCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 106; Mature: 105

Protein sequence:

>106_residues
MTFHPTNNPVFWKTTADNLLADERYEKAAEAYLRLTELLPNDAEAWKGRGTALIGLEKYGDAVSALERALILLPDDKPTL
ELLAECFDKLGAVEKKTACILRINDL

Sequences:

>Translated_106_residues
MTFHPTNNPVFWKTTADNLLADERYEKAAEAYLRLTELLPNDAEAWKGRGTALIGLEKYGDAVSALERALILLPDDKPTL
ELLAECFDKLGAVEKKTACILRINDL
>Mature_105_residues
TFHPTNNPVFWKTTADNLLADERYEKAAEAYLRLTELLPNDAEAWKGRGTALIGLEKYGDAVSALERALILLPDDKPTLE
LLAECFDKLGAVEKKTACILRINDL

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11834; Mature: 11702

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFHPTNNPVFWKTTADNLLADERYEKAAEAYLRLTELLPNDAEAWKGRGTALIGLEKYG
CCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCEEEEEHHHHC
DAVSALERALILLPDDKPTLELLAECFDKLGAVEKKTACILRINDL
HHHHHHHHEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECC
>Mature Secondary Structure 
TFHPTNNPVFWKTTADNLLADERYEKAAEAYLRLTELLPNDAEAWKGRGTALIGLEKYG
CCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCEEEEEHHHHC
DAVSALERALILLPDDKPTLELLAECFDKLGAVEKKTACILRINDL
HHHHHHHHEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA