| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485300
Identifier: 124485300
GI number: 124485300
Start: 451420
End: 451740
Strand: Reverse
Name: 124485300
Synonym: Mlab_0475
Alternate gene names: NA
Gene position: 451740-451420 (Counterclockwise)
Preceding gene: 124485301
Following gene: 124485299
Centisome position: 25.03
GC content: 48.91
Gene sequence:
>321_bases ATGACATTTCACCCCACAAACAACCCTGTCTTCTGGAAGACTACCGCAGACAATCTTCTCGCAGATGAGCGCTATGAAAA AGCAGCGGAAGCCTACCTGAGATTAACGGAACTTCTGCCGAATGATGCTGAAGCCTGGAAAGGAAGAGGCACAGCCCTGA TCGGTCTTGAAAAATACGGAGATGCCGTCAGCGCTTTGGAAAGAGCCCTGATTCTTCTGCCCGATGACAAACCCACCCTT GAATTACTTGCCGAATGCTTTGACAAGCTTGGTGCTGTTGAGAAAAAAACGGCCTGCATTCTCCGAATCAACGATCTGTA G
Upstream 100 bases:
>100_bases ACTCGGGTTCGAATCCCGATATCAGCATTTATCGGCGGCACGGGTGTGCTGCCAAGTCAAACATGACCACGAGTCATGAG TATTTTCCTGCAGTTTTATT
Downstream 100 bases:
>100_bases AGCGTATCGGGAAGATATCCTTATCCTCTAAGACACCAAGAAAAATATATGCCCGATTTTCAGTGTCCAAAGTGCGGCGC AGCACTTCAGGTCAAACCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 106; Mature: 105
Protein sequence:
>106_residues MTFHPTNNPVFWKTTADNLLADERYEKAAEAYLRLTELLPNDAEAWKGRGTALIGLEKYGDAVSALERALILLPDDKPTL ELLAECFDKLGAVEKKTACILRINDL
Sequences:
>Translated_106_residues MTFHPTNNPVFWKTTADNLLADERYEKAAEAYLRLTELLPNDAEAWKGRGTALIGLEKYGDAVSALERALILLPDDKPTL ELLAECFDKLGAVEKKTACILRINDL >Mature_105_residues TFHPTNNPVFWKTTADNLLADERYEKAAEAYLRLTELLPNDAEAWKGRGTALIGLEKYGDAVSALERALILLPDDKPTLE LLAECFDKLGAVEKKTACILRINDL
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11834; Mature: 11702
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFHPTNNPVFWKTTADNLLADERYEKAAEAYLRLTELLPNDAEAWKGRGTALIGLEKYG CCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCEEEEEHHHHC DAVSALERALILLPDDKPTLELLAECFDKLGAVEKKTACILRINDL HHHHHHHHEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECC >Mature Secondary Structure TFHPTNNPVFWKTTADNLLADERYEKAAEAYLRLTELLPNDAEAWKGRGTALIGLEKYG CCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCEEEEEHHHHC DAVSALERALILLPDDKPTLELLAECFDKLGAVEKKTACILRINDL HHHHHHHHEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA