Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

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The map label for this gene is 124485305

Identifier: 124485305

GI number: 124485305

Start: 454185

End: 455312

Strand: Reverse

Name: 124485305

Synonym: Mlab_0480

Alternate gene names: NA

Gene position: 455312-454185 (Counterclockwise)

Preceding gene: 124485306

Following gene: 124485301

Centisome position: 25.23

GC content: 55.32

Gene sequence:

>1128_bases
ATGACCGGTAAGGAAAAATCCGGCGGCGTCCTCGAACGCCGCGGAGCATTTCTCACAGCCATGAGGCAGATGACCTTCGA
AGCAGGGCACTTCACCACTGCTGATCTGGCATCTGCCGCCAATGTCCCCCGTTCAACGGCCCAGGACTGGATTAACCGGA
TGATAAAAGAGGGCTGCATCTTCGTGAAAGAAGAGCCTCACGGAAGAAATCCCGCACATTACGCCTCGAGAAGTGCCCTT
CCTCAGACCACCTGCAAACGTATTTTTACAACTCTTGACGGCAGGGACGTGGAAATTTTTCACGAGTGTCTCTCGAGCGG
CTGTGCGGGATTCTGCGAATTTCATCACCGGAAAGCCGGCGGAGCGGCAATCTCCGTTACCCGCGACGGGATGATCTTTC
GCGAACGATCAAGGATCGGCGAGGAGAATGAACTCAGACTTGATTTTGCCGCAGTAGGTCTTGCTGCGGTCAAAAAAGAC
GGAGCCGACATCATACAGACGATCCATTCGATCCCCGGAGGGCCCGCATACTCGTTATCGGCGATGATGGGGCATGCAAA
AGGAGTAAAGGGCGTACAGATTACGGTTGGAAACGGCGTAGTCACCGGTGAAGTTCGAACCCCGGCACTTACCCCCGTAA
CGATCGGCGTCGATGATACCGACCGGAAAGGATGCGGCGGCGCGACCTTTGCCCTGTCCCAGGCTCTGATGAAGTATCTG
ACGGATCCTGGAAGTGTGATCGGGATAAGACATCAGGTCGCCGCCCTCTGTCAGGACATCGAAGAAAAAACCGCAGGAAA
CTCCTGCAGCTTCATCGAACTTGCCGTTGATCCGAGCGTTCTCCCAACGCTTGCCGCAAAGGTCTGCAGATTTGTCGATG
AGGAAAGCGTCTCCGATGAATGGGGTGTCGCCATCATGACGAGCATCACCGTGCCGGAAGGTCTTCTCAGGCTTGGCGAA
AAGATCCGTCGTGAACGCGTTTCCATGGAAGAAGTCCTAGAGACTGCGAAAAGGTCGGGCGTTCAGGTCTACGGGAAAAA
AGGCATCATCGGGGCGGTCGGGGCGGTCAGTCTGAAATCACAGCCGCAGGAAATCCTTCTGGATCCGGCATGTCCGATTG
TCTTCTGA

Upstream 100 bases:

>100_bases
ACCGAGTATGCCGGCGCGATCACCTTCATCGGCCGGGGCGCAGGATCTGTTGAAACGGCCAGTGCGATCCTGGCGGATCT
TCTCTTTATCACAGACAAAT

Downstream 100 bases:

>100_bases
ATTATTTTTAACAAAAATAGCGAGGGTTAGTGTACCCACTCTCCCCGGGCATTTCCTGAGAGTTCCTGTTTCCAGATCGG
CACTTTTTCCTTCAGTTTTT

Product: ribosomal protein L15-like protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 375; Mature: 374

Protein sequence:

>375_residues
MTGKEKSGGVLERRGAFLTAMRQMTFEAGHFTTADLASAANVPRSTAQDWINRMIKEGCIFVKEEPHGRNPAHYASRSAL
PQTTCKRIFTTLDGRDVEIFHECLSSGCAGFCEFHHRKAGGAAISVTRDGMIFRERSRIGEENELRLDFAAVGLAAVKKD
GADIIQTIHSIPGGPAYSLSAMMGHAKGVKGVQITVGNGVVTGEVRTPALTPVTIGVDDTDRKGCGGATFALSQALMKYL
TDPGSVIGIRHQVAALCQDIEEKTAGNSCSFIELAVDPSVLPTLAAKVCRFVDEESVSDEWGVAIMTSITVPEGLLRLGE
KIRRERVSMEEVLETAKRSGVQVYGKKGIIGAVGAVSLKSQPQEILLDPACPIVF

Sequences:

>Translated_375_residues
MTGKEKSGGVLERRGAFLTAMRQMTFEAGHFTTADLASAANVPRSTAQDWINRMIKEGCIFVKEEPHGRNPAHYASRSAL
PQTTCKRIFTTLDGRDVEIFHECLSSGCAGFCEFHHRKAGGAAISVTRDGMIFRERSRIGEENELRLDFAAVGLAAVKKD
GADIIQTIHSIPGGPAYSLSAMMGHAKGVKGVQITVGNGVVTGEVRTPALTPVTIGVDDTDRKGCGGATFALSQALMKYL
TDPGSVIGIRHQVAALCQDIEEKTAGNSCSFIELAVDPSVLPTLAAKVCRFVDEESVSDEWGVAIMTSITVPEGLLRLGE
KIRRERVSMEEVLETAKRSGVQVYGKKGIIGAVGAVSLKSQPQEILLDPACPIVF
>Mature_374_residues
TGKEKSGGVLERRGAFLTAMRQMTFEAGHFTTADLASAANVPRSTAQDWINRMIKEGCIFVKEEPHGRNPAHYASRSALP
QTTCKRIFTTLDGRDVEIFHECLSSGCAGFCEFHHRKAGGAAISVTRDGMIFRERSRIGEENELRLDFAAVGLAAVKKDG
ADIIQTIHSIPGGPAYSLSAMMGHAKGVKGVQITVGNGVVTGEVRTPALTPVTIGVDDTDRKGCGGATFALSQALMKYLT
DPGSVIGIRHQVAALCQDIEEKTAGNSCSFIELAVDPSVLPTLAAKVCRFVDEESVSDEWGVAIMTSITVPEGLLRLGEK
IRRERVSMEEVLETAKRSGVQVYGKKGIIGAVGAVSLKSQPQEILLDPACPIVF

Specific function: Unknown

COG id: COG1571

COG function: function code R; Predicted DNA-binding protein containing a Zn-ribbon domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40134; Mature: 40002

Theoretical pI: Translated: 7.20; Mature: 7.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGKEKSGGVLERRGAFLTAMRQMTFEAGHFTTADLASAANVPRSTAQDWINRMIKEGCI
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCEE
FVKEEPHGRNPAHYASRSALPQTTCKRIFTTLDGRDVEIFHECLSSGCAGFCEFHHRKAG
EEECCCCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHCCC
GAAISVTRDGMIFRERSRIGEENELRLDFAAVGLAAVKKDGADIIQTIHSIPGGPAYSLS
CEEEEEECCCCEEHHHHHCCCCCCEEEHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHH
AMMGHAKGVKGVQITVGNGVVTGEVRTPALTPVTIGVDDTDRKGCGGATFALSQALMKYL
HHHHHHCCCCEEEEEECCEEEECCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHH
TDPGSVIGIRHQVAALCQDIEEKTAGNSCSFIELAVDPSVLPTLAAKVCRFVDEESVSDE
CCCCCEEHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCC
WGVAIMTSITVPEGLLRLGEKIRRERVSMEEVLETAKRSGVQVYGKKGIIGAVGAVSLKS
CCEEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCEEEECCCCCEECCCHHHCCC
QPQEILLDPACPIVF
CCHHHEECCCCCCCC
>Mature Secondary Structure 
TGKEKSGGVLERRGAFLTAMRQMTFEAGHFTTADLASAANVPRSTAQDWINRMIKEGCI
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCEE
FVKEEPHGRNPAHYASRSALPQTTCKRIFTTLDGRDVEIFHECLSSGCAGFCEFHHRKAG
EEECCCCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHCCC
GAAISVTRDGMIFRERSRIGEENELRLDFAAVGLAAVKKDGADIIQTIHSIPGGPAYSLS
CEEEEEECCCCEEHHHHHCCCCCCEEEHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHH
AMMGHAKGVKGVQITVGNGVVTGEVRTPALTPVTIGVDDTDRKGCGGATFALSQALMKYL
HHHHHHCCCCEEEEEECCEEEECCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHH
TDPGSVIGIRHQVAALCQDIEEKTAGNSCSFIELAVDPSVLPTLAAKVCRFVDEESVSDE
CCCCCEEHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCC
WGVAIMTSITVPEGLLRLGEKIRRERVSMEEVLETAKRSGVQVYGKKGIIGAVGAVSLKS
CCEEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCEEEECCCCCEECCCHHHCCC
QPQEILLDPACPIVF
CCHHHEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA