| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485259
Identifier: 124485259
GI number: 124485259
Start: 415734
End: 416531
Strand: Reverse
Name: 124485259
Synonym: Mlab_0432
Alternate gene names: NA
Gene position: 416531-415734 (Counterclockwise)
Preceding gene: 124485260
Following gene: 124485253
Centisome position: 23.08
GC content: 53.76
Gene sequence:
>798_bases ATGACCAATCTGGCCGAAAGCATCCAAATTAATTACGGAATTTGCACGACCTGCGGAGCCTGCGTCAAAGCATGCCCAAA CAACATCATTCAGCGTGACGACGACGCCTCGCCGATCGTTCATCCCGGCCCGGAGTGCATATCCTGCGGGCACTGTATCG CGATCTGCCCAAGCGGCGCCATGACGATTCCACAAGAGACGGAAAAGGCAGGATTCGCCGACGCTGCGATCCTTGCACGC CACCTCAGATCGCGCCGGTCGATCCGTCTCTGGAAAGACAGCCCAGTTACGAAAGAAGAGTGCGAAGAACTGATTAGAAT CACCGCTCATGCACCATCGGGCTGTAATATCCACCCGGTCAAATGGGTCGTCGTGAATGAGCCCGCAAAAGTGAAGGCAT TCGTCGCGGCTTCAGCCGAACTCCTGAGGCAGGTTCCAAAGGATAACCGCATGTACGGTCTTGCTGCCGGAATGCTGAGA AAACTGGATGCAGGAAACGACATTCTCTGCAGAAACGCACCGGCGCTTCTTATCGCAGTCGCAAATCCCAAAGAAGATTT AGGTCTTGTGGACAGTATTATCTCTCTGACCTATGCGGATGTCTATGCCCCTTCGATCGGGCTTGGGACCTGCTGGGCAG GATTTGTGATGATCCTTCTGGGCGTTTTCCCCCCGCTTGAAAAAATTCTCGGCATTCCGGAAGGATACAAAGCGCAGTTC GCCCTACTTGCAGGACATCCGCAGTATGCATTCACGCAGATTCCGCCTAGAGATATGCCGGAAATCTTCTGGACGTAA
Upstream 100 bases:
>100_bases CTCAAGCTCTTCAAAAAAGTTTCCCAGAAAGACAAATTCATTGCTGCGGCAGAGAAACTCTGACCGCACGCTTTTTTTAT CACCCGCCCAATACTAGCTT
Downstream 100 bases:
>100_bases AAAAAGATTAGAGGGTCATAAGCAAACGGGGCAGCTCGAGAGCAAGCCAGGGATTTGCCTTGAATATTGCAATCACAAGA GATTTCACCGTGATCTCATC
Product: hypothetical protein
Products: NA
Alternate protein names: Nitroreductase Family Protein; Nitroreductase Family Protein Fused Ferredoxin Domain; Ferredoxin; Ferridoxin; Reductase; Ferredoxin-Nitroreductase Protein; Ferredoxin-Like Domain-Containing Protein; Nitroreductase Domain Protein
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MTNLAESIQINYGICTTCGACVKACPNNIIQRDDDASPIVHPGPECISCGHCIAICPSGAMTIPQETEKAGFADAAILAR HLRSRRSIRLWKDSPVTKEECEELIRITAHAPSGCNIHPVKWVVVNEPAKVKAFVAASAELLRQVPKDNRMYGLAAGMLR KLDAGNDILCRNAPALLIAVANPKEDLGLVDSIISLTYADVYAPSIGLGTCWAGFVMILLGVFPPLEKILGIPEGYKAQF ALLAGHPQYAFTQIPPRDMPEIFWT
Sequences:
>Translated_265_residues MTNLAESIQINYGICTTCGACVKACPNNIIQRDDDASPIVHPGPECISCGHCIAICPSGAMTIPQETEKAGFADAAILAR HLRSRRSIRLWKDSPVTKEECEELIRITAHAPSGCNIHPVKWVVVNEPAKVKAFVAASAELLRQVPKDNRMYGLAAGMLR KLDAGNDILCRNAPALLIAVANPKEDLGLVDSIISLTYADVYAPSIGLGTCWAGFVMILLGVFPPLEKILGIPEGYKAQF ALLAGHPQYAFTQIPPRDMPEIFWT >Mature_264_residues TNLAESIQINYGICTTCGACVKACPNNIIQRDDDASPIVHPGPECISCGHCIAICPSGAMTIPQETEKAGFADAAILARH LRSRRSIRLWKDSPVTKEECEELIRITAHAPSGCNIHPVKWVVVNEPAKVKAFVAASAELLRQVPKDNRMYGLAAGMLRK LDAGNDILCRNAPALLIAVANPKEDLGLVDSIISLTYADVYAPSIGLGTCWAGFVMILLGVFPPLEKILGIPEGYKAQFA LLAGHPQYAFTQIPPRDMPEIFWT
Specific function: Unknown
COG id: COG0778
COG function: function code C; Nitroreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28676; Mature: 28544
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNLAESIQINYGICTTCGACVKACPNNIIQRDDDASPIVHPGPECISCGHCIAICPSGA CCCCCCCEEECCCHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCHHHHCCCCEEEECCCCC MTIPQETEKAGFADAAILARHLRSRRSIRLWKDSPVTKEECEELIRITAHAPSGCNIHPV CCCCCHHHHCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCEE KWVVVNEPAKVKAFVAASAELLRQVPKDNRMYGLAAGMLRKLDAGNDILCRNAPALLIAV EEEEECCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEECCCCEEEEEE ANPKEDLGLVDSIISLTYADVYAPSIGLGTCWAGFVMILLGVFPPLEKILGIPEGYKAQF CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCEEE ALLAGHPQYAFTQIPPRDMPEIFWT EEEECCCCCEEECCCCCCCCHHCCC >Mature Secondary Structure TNLAESIQINYGICTTCGACVKACPNNIIQRDDDASPIVHPGPECISCGHCIAICPSGA CCCCCCEEECCCHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCHHHHCCCCEEEECCCCC MTIPQETEKAGFADAAILARHLRSRRSIRLWKDSPVTKEECEELIRITAHAPSGCNIHPV CCCCCHHHHCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCEE KWVVVNEPAKVKAFVAASAELLRQVPKDNRMYGLAAGMLRKLDAGNDILCRNAPALLIAV EEEEECCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEECCCCEEEEEE ANPKEDLGLVDSIISLTYADVYAPSIGLGTCWAGFVMILLGVFPPLEKILGIPEGYKAQF CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCEEE ALLAGHPQYAFTQIPPRDMPEIFWT EEEECCCCCEEECCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA