| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485260
Identifier: 124485260
GI number: 124485260
Start: 416569
End: 417540
Strand: Reverse
Name: 124485260
Synonym: Mlab_0433
Alternate gene names: NA
Gene position: 417540-416569 (Counterclockwise)
Preceding gene: 124485264
Following gene: 124485259
Centisome position: 23.13
GC content: 52.06
Gene sequence:
>972_bases ATGGTCAAGAGCGCCAATACAAAAAACGGAACCAATAAACAGACCCTTCAGGAAAAAATCGTCGGGCGAACCACAAATAT CGTCCATCTAACGCACAACGATTTGGACGCCGCGGGGTCGGACGCGATCTGCAGGATGGCGTTCGGCAATGAAATTTTTA CGCTCTTCTCGTCCGTCGGCCGGTTCGGCTGGTTTCTCGCGCAGGTCGGCGGGTGCAACGGGAAAGGAGACACGCTGATA ATCAGCGATCTCGGATATCAGAATGGCATCGAGGATCAGATACGAAAAGCCCATGCCGCCGGCTGGGTCATCCTGTGGTA TGACCACCACAAATGGACCGAGCCTGAGAAAAAACGTGTCCAGCCTTTCGTCCAGACCCTCATCGTGGACACAACGAAAT GTGCGACCGGCGTTGTTGCCTCGGTCTTAGCCAAAGATAACCAAAGCGCACGCGAGGTCGCAGGCGTCGTCTGCGATTAC GATCTCTGGAAACACCAGGATCCGCGGTCTGCAAAACTCGGGATCGTCACCTCGAAACAGGAAAACCTCAGACTCGTCAG GGACAAACTCACACAAGGCATCATCATCGACGACGAAGTATCCCGCATCTTTGAAAAAATCGAGCACGACAAAAACAAGT GCATGAAAAAAAGCATCAAGGCTGCAAAAATATTCCGGGGAAAATACACCATTGCAGTTATGCCCTCCTACGGATATCCA AGCGAGACCTCGGCCGAAGCACGCAGGCAGCTTGGTACCGACATCGAACTCCTCGTCTTCGACACAGGAAAATTCTCTCT GCGCAGCGTTCCTGAAATCAGCCATCTCATCGCGAGAGAGTTCGGGGGAGGAGGACACCCCAACGCATCCGGCGGGAGTT TCAACTACACCTGGAAAGAAAAATGGATGCTCAAGCTCTTCAAAAAAGTTTCCCAGAAAGACAAATTCATTGCTGCGGCA GAGAAACTCTGA
Upstream 100 bases:
>100_bases AAAGGCTCTTGCGTAACTAATGTTAGTATGAGAACTATTTATAATAATCTGATTGACTCTCTCAAACAGCTTATCCATTC CAAAAACGTAGTACTACACA
Downstream 100 bases:
>100_bases CCGCACGCTTTTTTTATCACCCGCCCAATACTAGCTTATGACCAATCTGGCCGAAAGCATCCAAATTAATTACGGAATTT GCACGACCTGCGGAGCCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: DHH-Related Protein
Number of amino acids: Translated: 323; Mature: 323
Protein sequence:
>323_residues MVKSANTKNGTNKQTLQEKIVGRTTNIVHLTHNDLDAAGSDAICRMAFGNEIFTLFSSVGRFGWFLAQVGGCNGKGDTLI ISDLGYQNGIEDQIRKAHAAGWVILWYDHHKWTEPEKKRVQPFVQTLIVDTTKCATGVVASVLAKDNQSAREVAGVVCDY DLWKHQDPRSAKLGIVTSKQENLRLVRDKLTQGIIIDDEVSRIFEKIEHDKNKCMKKSIKAAKIFRGKYTIAVMPSYGYP SETSAEARRQLGTDIELLVFDTGKFSLRSVPEISHLIAREFGGGGHPNASGGSFNYTWKEKWMLKLFKKVSQKDKFIAAA EKL
Sequences:
>Translated_323_residues MVKSANTKNGTNKQTLQEKIVGRTTNIVHLTHNDLDAAGSDAICRMAFGNEIFTLFSSVGRFGWFLAQVGGCNGKGDTLI ISDLGYQNGIEDQIRKAHAAGWVILWYDHHKWTEPEKKRVQPFVQTLIVDTTKCATGVVASVLAKDNQSAREVAGVVCDY DLWKHQDPRSAKLGIVTSKQENLRLVRDKLTQGIIIDDEVSRIFEKIEHDKNKCMKKSIKAAKIFRGKYTIAVMPSYGYP SETSAEARRQLGTDIELLVFDTGKFSLRSVPEISHLIAREFGGGGHPNASGGSFNYTWKEKWMLKLFKKVSQKDKFIAAA EKL >Mature_323_residues MVKSANTKNGTNKQTLQEKIVGRTTNIVHLTHNDLDAAGSDAICRMAFGNEIFTLFSSVGRFGWFLAQVGGCNGKGDTLI ISDLGYQNGIEDQIRKAHAAGWVILWYDHHKWTEPEKKRVQPFVQTLIVDTTKCATGVVASVLAKDNQSAREVAGVVCDY DLWKHQDPRSAKLGIVTSKQENLRLVRDKLTQGIIIDDEVSRIFEKIEHDKNKCMKKSIKAAKIFRGKYTIAVMPSYGYP SETSAEARRQLGTDIELLVFDTGKFSLRSVPEISHLIAREFGGGGHPNASGGSFNYTWKEKWMLKLFKKVSQKDKFIAAA EKL
Specific function: Unknown
COG id: COG2404
COG function: function code R; Predicted phosphohydrolase (DHH superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36053; Mature: 36053
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKSANTKNGTNKQTLQEKIVGRTTNIVHLTHNDLDAAGSDAICRMAFGNEIFTLFSSVG CCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEEHHCHHHHHHHHHHH RFGWFLAQVGGCNGKGDTLIISDLGYQNGIEDQIRKAHAAGWVILWYDHHKWTEPEKKRV HHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCEEEEEECCCCCCCHHHHHH QPFVQTLIVDTTKCATGVVASVLAKDNQSAREVAGVVCDYDLWKHQDPRSAKLGIVTSKQ HHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHCCCCCCCCEEEEEECCH ENLRLVRDKLTQGIIIDDEVSRIFEKIEHDKNKCMKKSIKAAKIFRGKYTIAVMPSYGYP HHHHHHHHHHHCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCC SETSAEARRQLGTDIELLVFDTGKFSLRSVPEISHLIAREFGGGGHPNASGGSFNYTWKE CCCHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEHHH KWMLKLFKKVSQKDKFIAAAEKL HHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MVKSANTKNGTNKQTLQEKIVGRTTNIVHLTHNDLDAAGSDAICRMAFGNEIFTLFSSVG CCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEEHHCHHHHHHHHHHH RFGWFLAQVGGCNGKGDTLIISDLGYQNGIEDQIRKAHAAGWVILWYDHHKWTEPEKKRV HHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCEEEEEECCCCCCCHHHHHH QPFVQTLIVDTTKCATGVVASVLAKDNQSAREVAGVVCDYDLWKHQDPRSAKLGIVTSKQ HHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHCCCCCCCCEEEEEECCH ENLRLVRDKLTQGIIIDDEVSRIFEKIEHDKNKCMKKSIKAAKIFRGKYTIAVMPSYGYP HHHHHHHHHHHCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCC SETSAEARRQLGTDIELLVFDTGKFSLRSVPEISHLIAREFGGGGHPNASGGSFNYTWKE CCCHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEHHH KWMLKLFKKVSQKDKFIAAAEKL HHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA