| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is paaB [H]
Identifier: 124266181
GI number: 124266181
Start: 1050617
End: 1050907
Strand: Direct
Name: paaB [H]
Synonym: Mpe_A0988
Alternate gene names: 124266181
Gene position: 1050617-1050907 (Clockwise)
Preceding gene: 124266180
Following gene: 124266182
Centisome position: 25.98
GC content: 65.98
Gene sequence:
>291_bases ATGAGCACCGACACCGAATGGCCGCTGTGGGAGGTCTTCGTGCGCAGCAAGGCCGGCCTGGACCACAAGCACTGCGGCAG CCTGCACGCCACCGACGCGAAGATGGCGATCCAGCTCGCGCGCGACGTCTACACGCGCCGTCAGGAAGGGACGAGCCTCT GGGTGGTGCGTTCGGACCAGATCACCGCCAGCGACCCGGCCGAGAAGGGCGCCTTTTTCGACCCGATGGAGGACAAGGTC TACCGCCACCCGACCTTCTACGCGCTGCCGAAGTCGGTCGATCACATGTGA
Upstream 100 bases:
>100_bases AGCGCCTCGCCGCCCGCGTGCAGGCCTGGGCGGAGGGCGCCTGGGTGCGCGAGGCCGCGCTGGCGCATGCACGCAAGCAG GCACCGAAGGAGGAGGTCGC
Downstream 100 bases:
>100_bases ACCGAGGCCGGCATGACGCAATCCATCGAACTCCGGCGCGATCCCGCGGTGCAGTACCTGCTGCGCATCGCCGACACGAC GCTGATCCTGGCGCAGCGGC
Product: phenylacetate-CoA oxygenase subunit PaaB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 96; Mature: 95
Protein sequence:
>96_residues MSTDTEWPLWEVFVRSKAGLDHKHCGSLHATDAKMAIQLARDVYTRRQEGTSLWVVRSDQITASDPAEKGAFFDPMEDKV YRHPTFYALPKSVDHM
Sequences:
>Translated_96_residues MSTDTEWPLWEVFVRSKAGLDHKHCGSLHATDAKMAIQLARDVYTRRQEGTSLWVVRSDQITASDPAEKGAFFDPMEDKV YRHPTFYALPKSVDHM >Mature_95_residues STDTEWPLWEVFVRSKAGLDHKHCGSLHATDAKMAIQLARDVYTRRQEGTSLWVVRSDQITASDPAEKGAFFDPMEDKVY RHPTFYALPKSVDHM
Specific function: May be part of a multicomponent oxygenase involved in phenylacetyl-CoA hydroxylation [H]
COG id: COG3460
COG function: function code Q; Uncharacterized enzyme of phenylacetate metabolism
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787655, Length=94, Percent_Identity=60.6382978723404, Blast_Score=137, Evalue=2e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009359 [H]
Pfam domain/function: PF06243 PaaB [H]
EC number: NA
Molecular weight: Translated: 11010; Mature: 10879
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTDTEWPLWEVFVRSKAGLDHKHCGSLHATDAKMAIQLARDVYTRRQEGTSLWVVRSDQ CCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCC ITASDPAEKGAFFDPMEDKVYRHPTFYALPKSVDHM CCCCCCCCCCCCCCCCCCHHCCCCCEEECCCCCCCC >Mature Secondary Structure STDTEWPLWEVFVRSKAGLDHKHCGSLHATDAKMAIQLARDVYTRRQEGTSLWVVRSDQ CCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCC ITASDPAEKGAFFDPMEDKVYRHPTFYALPKSVDHM CCCCCCCCCCCCCCCCCCHHCCCCCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9748275; 9278503; 10766858 [H]