Definition Methylibium petroleiphilum PM1 chromosome, complete genome.
Accession NC_008825
Length 4,044,195

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The map label for this gene is paaA [H]

Identifier: 124266180

GI number: 124266180

Start: 1049619

End: 1050620

Strand: Direct

Name: paaA [H]

Synonym: Mpe_A0987

Alternate gene names: 124266180

Gene position: 1049619-1050620 (Clockwise)

Preceding gene: 124266179

Following gene: 124266181

Centisome position: 25.95

GC content: 69.56

Gene sequence:

>1002_bases
ATGTACACGCAAGCCATGGACAGCGCGCCGAAGGACGAGCGCCCGGCGGTCCGCTCGGTCGAGGAGGCGCGGCTCCAGCA
GCGCTTCGACGAGCGCATCGATGCCGGCGAGTTCATCGAGGCCAAGGGCTGGATGCCCGAGCACTACCGTCGCACGCTGG
TGCGCCAGATCAGCCAGCACGCGCATTCCGAGATCGTCGGCATGCTGCCCGAGGGGAACTGGATCGGTCGCGCGCCCACG
CTCAAGCGCAAGGCGATCCTGCTGGCCAAGGTGCAGGACGAGGGCGGCCATGGCCTCTACCTCTATGCCGCGGCCGAGAC
GCTGGGCACATCGCGCGACCAGCTGCTCGAGGCACTGCACAGCGGCCAGGCCAAGTACAGCTCGATCTTCAACTACCCCA
CGCTGACCTGGGCCGACATGGGCACGATCGGCTGGCTGGTCGACGGCGCGGCGATCATGAACCAGGTGCCGATCTGCCGT
TGCTCCTATGCGCCGTATGCGCGCGCGATGGTGCGCATCTGCCGCGAGGAGAGCTTCCACCAGCGCCAGGGCTACGAGGC
CCTGCTGACGATGATGCAGCAGGGCAGCGACGCGCAACGGGCGATGGTGCAGGACGCGGTGAACCGCTGGTGGTGGCCGT
CGATCATGATGTTCGGCCCGCCGGACGACCAGTCGCCGAACTCGGCGCAGTCGATGCGCTGGGGCATCAAGCGCGTCAGC
AACGACGAGCTGCGGCAGAAGTTCATCGACGCCGCGGTGGAGCAGGCCCAGGTGCTGGGCGTCACGCTGCCCGATCCGGC
GCTGCGGTGGAACGCCGAGCGCGAGCACTGGGACCACGGGCCGATCGACTGGAGCGAGTTCAAGCGCGTGCTCGCCGGCG
ACGGGCCCTGCAACCGCGAGCGCCTCGCCGCCCGCGTGCAGGCCTGGGCGGAGGGCGCCTGGGTGCGCGAGGCCGCGCTG
GCGCATGCACGCAAGCAGGCACCGAAGGAGGAGGTCGCATGA

Upstream 100 bases:

>100_bases
CACGACGGTCAGCGTCGGCCTGCCCGATTCGATCGAACGCACGCTGGTCGGCAAGGCCCGCCGCGTGATCGACAGGCGAC
CCAAGTAAGGAACCCGCACC

Downstream 100 bases:

>100_bases
GCACCGACACCGAATGGCCGCTGTGGGAGGTCTTCGTGCGCAGCAAGGCCGGCCTGGACCACAAGCACTGCGGCAGCCTG
CACGCCACCGACGCGAAGAT

Product: phenylacetate-CoA oxygenase subunit PaaA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MYTQAMDSAPKDERPAVRSVEEARLQQRFDERIDAGEFIEAKGWMPEHYRRTLVRQISQHAHSEIVGMLPEGNWIGRAPT
LKRKAILLAKVQDEGGHGLYLYAAAETLGTSRDQLLEALHSGQAKYSSIFNYPTLTWADMGTIGWLVDGAAIMNQVPICR
CSYAPYARAMVRICREESFHQRQGYEALLTMMQQGSDAQRAMVQDAVNRWWWPSIMMFGPPDDQSPNSAQSMRWGIKRVS
NDELRQKFIDAAVEQAQVLGVTLPDPALRWNAEREHWDHGPIDWSEFKRVLAGDGPCNRERLAARVQAWAEGAWVREAAL
AHARKQAPKEEVA

Sequences:

>Translated_333_residues
MYTQAMDSAPKDERPAVRSVEEARLQQRFDERIDAGEFIEAKGWMPEHYRRTLVRQISQHAHSEIVGMLPEGNWIGRAPT
LKRKAILLAKVQDEGGHGLYLYAAAETLGTSRDQLLEALHSGQAKYSSIFNYPTLTWADMGTIGWLVDGAAIMNQVPICR
CSYAPYARAMVRICREESFHQRQGYEALLTMMQQGSDAQRAMVQDAVNRWWWPSIMMFGPPDDQSPNSAQSMRWGIKRVS
NDELRQKFIDAAVEQAQVLGVTLPDPALRWNAEREHWDHGPIDWSEFKRVLAGDGPCNRERLAARVQAWAEGAWVREAAL
AHARKQAPKEEVA
>Mature_333_residues
MYTQAMDSAPKDERPAVRSVEEARLQQRFDERIDAGEFIEAKGWMPEHYRRTLVRQISQHAHSEIVGMLPEGNWIGRAPT
LKRKAILLAKVQDEGGHGLYLYAAAETLGTSRDQLLEALHSGQAKYSSIFNYPTLTWADMGTIGWLVDGAAIMNQVPICR
CSYAPYARAMVRICREESFHQRQGYEALLTMMQQGSDAQRAMVQDAVNRWWWPSIMMFGPPDDQSPNSAQSMRWGIKRVS
NDELRQKFIDAAVEQAQVLGVTLPDPALRWNAEREHWDHGPIDWSEFKRVLAGDGPCNRERLAARVQAWAEGAWVREAAL
AHARKQAPKEEVA

Specific function: May be part of a multicomponent oxygenase involved in phenylacetyl-CoA hydroxylation [H]

COG id: COG3396

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787654, Length=301, Percent_Identity=65.78073089701, Blast_Score=434, Evalue=1e-123,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR011881
- InterPro:   IPR007814 [H]

Pfam domain/function: PF05138 PaaA_PaaC [H]

EC number: NA

Molecular weight: Translated: 37799; Mature: 37799

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYTQAMDSAPKDERPAVRSVEEARLQQRFDERIDAGEFIEAKGWMPEHYRRTLVRQISQH
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHH
AHSEIVGMLPEGNWIGRAPTLKRKAILLAKVQDEGGHGLYLYAAAETLGTSRDQLLEALH
HHHHHHEECCCCCCCCCCCCHHHHEEEEEEEECCCCCEEEEEEEHHHHCCCHHHHHHHHH
SGQAKYSSIFNYPTLTWADMGTIGWLVDGAAIMNQVPICRCSYAPYARAMVRICREESFH
CCCHHHHHHHCCCCEEHHHCCHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHH
QRQGYEALLTMMQQGSDAQRAMVQDAVNRWWWPSIMMFGPPDDQSPNSAQSMRWGIKRVS
HHCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHCC
NDELRQKFIDAAVEQAQVLGVTLPDPALRWNAEREHWDHGPIDWSEFKRVLAGDGPCNRE
HHHHHHHHHHHHHHHHHHEEEECCCHHHCCCCCHHCCCCCCCCHHHHHHHHCCCCCCCHH
RLAARVQAWAEGAWVREAALAHARKQAPKEEVA
HHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHCC
>Mature Secondary Structure
MYTQAMDSAPKDERPAVRSVEEARLQQRFDERIDAGEFIEAKGWMPEHYRRTLVRQISQH
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHH
AHSEIVGMLPEGNWIGRAPTLKRKAILLAKVQDEGGHGLYLYAAAETLGTSRDQLLEALH
HHHHHHEECCCCCCCCCCCCHHHHEEEEEEEECCCCCEEEEEEEHHHHCCCHHHHHHHHH
SGQAKYSSIFNYPTLTWADMGTIGWLVDGAAIMNQVPICRCSYAPYARAMVRICREESFH
CCCHHHHHHHCCCCEEHHHCCHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHH
QRQGYEALLTMMQQGSDAQRAMVQDAVNRWWWPSIMMFGPPDDQSPNSAQSMRWGIKRVS
HHCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHCC
NDELRQKFIDAAVEQAQVLGVTLPDPALRWNAEREHWDHGPIDWSEFKRVLAGDGPCNRE
HHHHHHHHHHHHHHHHHHEEEECCCHHHCCCCCHHCCCCCCCCHHHHHHHHCCCCCCCHH
RLAARVQAWAEGAWVREAALAHARKQAPKEEVA
HHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9748275; 9278503; 10766858 [H]