| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is paaA [H]
Identifier: 124266180
GI number: 124266180
Start: 1049619
End: 1050620
Strand: Direct
Name: paaA [H]
Synonym: Mpe_A0987
Alternate gene names: 124266180
Gene position: 1049619-1050620 (Clockwise)
Preceding gene: 124266179
Following gene: 124266181
Centisome position: 25.95
GC content: 69.56
Gene sequence:
>1002_bases ATGTACACGCAAGCCATGGACAGCGCGCCGAAGGACGAGCGCCCGGCGGTCCGCTCGGTCGAGGAGGCGCGGCTCCAGCA GCGCTTCGACGAGCGCATCGATGCCGGCGAGTTCATCGAGGCCAAGGGCTGGATGCCCGAGCACTACCGTCGCACGCTGG TGCGCCAGATCAGCCAGCACGCGCATTCCGAGATCGTCGGCATGCTGCCCGAGGGGAACTGGATCGGTCGCGCGCCCACG CTCAAGCGCAAGGCGATCCTGCTGGCCAAGGTGCAGGACGAGGGCGGCCATGGCCTCTACCTCTATGCCGCGGCCGAGAC GCTGGGCACATCGCGCGACCAGCTGCTCGAGGCACTGCACAGCGGCCAGGCCAAGTACAGCTCGATCTTCAACTACCCCA CGCTGACCTGGGCCGACATGGGCACGATCGGCTGGCTGGTCGACGGCGCGGCGATCATGAACCAGGTGCCGATCTGCCGT TGCTCCTATGCGCCGTATGCGCGCGCGATGGTGCGCATCTGCCGCGAGGAGAGCTTCCACCAGCGCCAGGGCTACGAGGC CCTGCTGACGATGATGCAGCAGGGCAGCGACGCGCAACGGGCGATGGTGCAGGACGCGGTGAACCGCTGGTGGTGGCCGT CGATCATGATGTTCGGCCCGCCGGACGACCAGTCGCCGAACTCGGCGCAGTCGATGCGCTGGGGCATCAAGCGCGTCAGC AACGACGAGCTGCGGCAGAAGTTCATCGACGCCGCGGTGGAGCAGGCCCAGGTGCTGGGCGTCACGCTGCCCGATCCGGC GCTGCGGTGGAACGCCGAGCGCGAGCACTGGGACCACGGGCCGATCGACTGGAGCGAGTTCAAGCGCGTGCTCGCCGGCG ACGGGCCCTGCAACCGCGAGCGCCTCGCCGCCCGCGTGCAGGCCTGGGCGGAGGGCGCCTGGGTGCGCGAGGCCGCGCTG GCGCATGCACGCAAGCAGGCACCGAAGGAGGAGGTCGCATGA
Upstream 100 bases:
>100_bases CACGACGGTCAGCGTCGGCCTGCCCGATTCGATCGAACGCACGCTGGTCGGCAAGGCCCGCCGCGTGATCGACAGGCGAC CCAAGTAAGGAACCCGCACC
Downstream 100 bases:
>100_bases GCACCGACACCGAATGGCCGCTGTGGGAGGTCTTCGTGCGCAGCAAGGCCGGCCTGGACCACAAGCACTGCGGCAGCCTG CACGCCACCGACGCGAAGAT
Product: phenylacetate-CoA oxygenase subunit PaaA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 333; Mature: 333
Protein sequence:
>333_residues MYTQAMDSAPKDERPAVRSVEEARLQQRFDERIDAGEFIEAKGWMPEHYRRTLVRQISQHAHSEIVGMLPEGNWIGRAPT LKRKAILLAKVQDEGGHGLYLYAAAETLGTSRDQLLEALHSGQAKYSSIFNYPTLTWADMGTIGWLVDGAAIMNQVPICR CSYAPYARAMVRICREESFHQRQGYEALLTMMQQGSDAQRAMVQDAVNRWWWPSIMMFGPPDDQSPNSAQSMRWGIKRVS NDELRQKFIDAAVEQAQVLGVTLPDPALRWNAEREHWDHGPIDWSEFKRVLAGDGPCNRERLAARVQAWAEGAWVREAAL AHARKQAPKEEVA
Sequences:
>Translated_333_residues MYTQAMDSAPKDERPAVRSVEEARLQQRFDERIDAGEFIEAKGWMPEHYRRTLVRQISQHAHSEIVGMLPEGNWIGRAPT LKRKAILLAKVQDEGGHGLYLYAAAETLGTSRDQLLEALHSGQAKYSSIFNYPTLTWADMGTIGWLVDGAAIMNQVPICR CSYAPYARAMVRICREESFHQRQGYEALLTMMQQGSDAQRAMVQDAVNRWWWPSIMMFGPPDDQSPNSAQSMRWGIKRVS NDELRQKFIDAAVEQAQVLGVTLPDPALRWNAEREHWDHGPIDWSEFKRVLAGDGPCNRERLAARVQAWAEGAWVREAAL AHARKQAPKEEVA >Mature_333_residues MYTQAMDSAPKDERPAVRSVEEARLQQRFDERIDAGEFIEAKGWMPEHYRRTLVRQISQHAHSEIVGMLPEGNWIGRAPT LKRKAILLAKVQDEGGHGLYLYAAAETLGTSRDQLLEALHSGQAKYSSIFNYPTLTWADMGTIGWLVDGAAIMNQVPICR CSYAPYARAMVRICREESFHQRQGYEALLTMMQQGSDAQRAMVQDAVNRWWWPSIMMFGPPDDQSPNSAQSMRWGIKRVS NDELRQKFIDAAVEQAQVLGVTLPDPALRWNAEREHWDHGPIDWSEFKRVLAGDGPCNRERLAARVQAWAEGAWVREAAL AHARKQAPKEEVA
Specific function: May be part of a multicomponent oxygenase involved in phenylacetyl-CoA hydroxylation [H]
COG id: COG3396
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787654, Length=301, Percent_Identity=65.78073089701, Blast_Score=434, Evalue=1e-123,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR011881 - InterPro: IPR007814 [H]
Pfam domain/function: PF05138 PaaA_PaaC [H]
EC number: NA
Molecular weight: Translated: 37799; Mature: 37799
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYTQAMDSAPKDERPAVRSVEEARLQQRFDERIDAGEFIEAKGWMPEHYRRTLVRQISQH CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHH AHSEIVGMLPEGNWIGRAPTLKRKAILLAKVQDEGGHGLYLYAAAETLGTSRDQLLEALH HHHHHHEECCCCCCCCCCCCHHHHEEEEEEEECCCCCEEEEEEEHHHHCCCHHHHHHHHH SGQAKYSSIFNYPTLTWADMGTIGWLVDGAAIMNQVPICRCSYAPYARAMVRICREESFH CCCHHHHHHHCCCCEEHHHCCHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHH QRQGYEALLTMMQQGSDAQRAMVQDAVNRWWWPSIMMFGPPDDQSPNSAQSMRWGIKRVS HHCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHCC NDELRQKFIDAAVEQAQVLGVTLPDPALRWNAEREHWDHGPIDWSEFKRVLAGDGPCNRE HHHHHHHHHHHHHHHHHHEEEECCCHHHCCCCCHHCCCCCCCCHHHHHHHHCCCCCCCHH RLAARVQAWAEGAWVREAALAHARKQAPKEEVA HHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHCC >Mature Secondary Structure MYTQAMDSAPKDERPAVRSVEEARLQQRFDERIDAGEFIEAKGWMPEHYRRTLVRQISQH CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHH AHSEIVGMLPEGNWIGRAPTLKRKAILLAKVQDEGGHGLYLYAAAETLGTSRDQLLEALH HHHHHHEECCCCCCCCCCCCHHHHEEEEEEEECCCCCEEEEEEEHHHHCCCHHHHHHHHH SGQAKYSSIFNYPTLTWADMGTIGWLVDGAAIMNQVPICRCSYAPYARAMVRICREESFH CCCHHHHHHHCCCCEEHHHCCHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHH QRQGYEALLTMMQQGSDAQRAMVQDAVNRWWWPSIMMFGPPDDQSPNSAQSMRWGIKRVS HHCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHCC NDELRQKFIDAAVEQAQVLGVTLPDPALRWNAEREHWDHGPIDWSEFKRVLAGDGPCNRE HHHHHHHHHHHHHHHHHHEEEECCCHHHCCCCCHHCCCCCCCCHHHHHHHHCCCCCCCHH RLAARVQAWAEGAWVREAALAHARKQAPKEEVA HHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9748275; 9278503; 10766858 [H]