| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is paaC [H]
Identifier: 124266182
GI number: 124266182
Start: 1050920
End: 1051693
Strand: Direct
Name: paaC [H]
Synonym: Mpe_A0989
Alternate gene names: 124266182
Gene position: 1050920-1051693 (Clockwise)
Preceding gene: 124266181
Following gene: 124266183
Centisome position: 25.99
GC content: 70.8
Gene sequence:
>774_bases ATGACGCAATCCATCGAACTCCGGCGCGATCCCGCGGTGCAGTACCTGCTGCGCATCGCCGACACGACGCTGATCCTGGC GCAGCGGCTCGGCGAGTGGTGCGGCCATGCGCCCATCCTCGAGGAGGACATCGCGCTGACCAACATGGCGCTCGACCTGG TGGGCCAGTCGCGTGCGCTGCTCACGCGGGCCGGCGAGCTCGAGGGCCGTGGCCACGACGAGGACCAGCTCGCCTTCCTG CGCGACGAGCGCGACTACTTCAACCTCACGTTGGTGGAACTGCCACGCGGCGACTTCGCGTTCACCGTGCTGCGCAACCT GTTCGTCGCCGGCTGGGCGCGGCTGCTGTGGGAGCGGTTGTGCGATTCCGGCGACATCGAGGTGGCCGCGATCGCCGGCA AGGCGGTCAAGGAGGTGCGCTACCACCAGCAGCACGCGATCGACTGGGTGGTGCGGCTCGCCGACGGCACCGACGAATCG CGCCACCGCATCGAGGCGGCGCTGGCACAGGCCTGGCGCTACACCCCCGAGCTGTTCGAGTCCGACGCGGTCGACGAACA CGCCCGCCAGGCCGGGCTCGGCCCGCGTCGCGCCGACCTGCGCGAGCCCTGGCTGGCCGAGATGGCGGCCGTGTTCGCCG AAGCCGGCCTGGCATTGCCGGCAACCGGCGGCTATACGAGCACCGGCAGCCGCGGCGTGCACAGCGAGCACATGGGCTAC CTGCTCGCCGAGATGCAGTACCTGCAGCGGGCCTACCCGGGAGGTGCGTGGTGA
Upstream 100 bases:
>100_bases GAAGGGCGCCTTTTTCGACCCGATGGAGGACAAGGTCTACCGCCACCCGACCTTCTACGCGCTGCCGAAGTCGGTCGATC ACATGTGAACCGAGGCCGGC
Downstream 100 bases:
>100_bases GCGCGGTGACGACGGCGCGCGAGGCGGTCGACCGTGACGACGCCGTGCGTTGCGAGCAGGCGTGGGCGGCACTGGACGAG GTGCTCGATCCCGAGGTGCC
Product: putative ring-hydroxylation complex protein 2
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 257; Mature: 256
Protein sequence:
>257_residues MTQSIELRRDPAVQYLLRIADTTLILAQRLGEWCGHAPILEEDIALTNMALDLVGQSRALLTRAGELEGRGHDEDQLAFL RDERDYFNLTLVELPRGDFAFTVLRNLFVAGWARLLWERLCDSGDIEVAAIAGKAVKEVRYHQQHAIDWVVRLADGTDES RHRIEAALAQAWRYTPELFESDAVDEHARQAGLGPRRADLREPWLAEMAAVFAEAGLALPATGGYTSTGSRGVHSEHMGY LLAEMQYLQRAYPGGAW
Sequences:
>Translated_257_residues MTQSIELRRDPAVQYLLRIADTTLILAQRLGEWCGHAPILEEDIALTNMALDLVGQSRALLTRAGELEGRGHDEDQLAFL RDERDYFNLTLVELPRGDFAFTVLRNLFVAGWARLLWERLCDSGDIEVAAIAGKAVKEVRYHQQHAIDWVVRLADGTDES RHRIEAALAQAWRYTPELFESDAVDEHARQAGLGPRRADLREPWLAEMAAVFAEAGLALPATGGYTSTGSRGVHSEHMGY LLAEMQYLQRAYPGGAW >Mature_256_residues TQSIELRRDPAVQYLLRIADTTLILAQRLGEWCGHAPILEEDIALTNMALDLVGQSRALLTRAGELEGRGHDEDQLAFLR DERDYFNLTLVELPRGDFAFTVLRNLFVAGWARLLWERLCDSGDIEVAAIAGKAVKEVRYHQQHAIDWVVRLADGTDESR HRIEAALAQAWRYTPELFESDAVDEHARQAGLGPRRADLREPWLAEMAAVFAEAGLALPATGGYTSTGSRGVHSEHMGYL LAEMQYLQRAYPGGAW
Specific function: May be part of a multicomponent oxygenase involved in phenylacetyl-CoA hydroxylation [H]
COG id: COG3396
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787656, Length=243, Percent_Identity=48.9711934156379, Blast_Score=237, Evalue=7e-64,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR011882 - InterPro: IPR007814 [H]
Pfam domain/function: PF05138 PaaA_PaaC [H]
EC number: NA
Molecular weight: Translated: 28769; Mature: 28638
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQSIELRRDPAVQYLLRIADTTLILAQRLGEWCGHAPILEEDIALTNMALDLVGQSRAL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHH LTRAGELEGRGHDEDQLAFLRDERDYFNLTLVELPRGDFAFTVLRNLFVAGWARLLWERL HHHCCCCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH CDSGDIEVAAIAGKAVKEVRYHQQHAIDWVVRLADGTDESRHRIEAALAQAWRYTPELFE CCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHH SDAVDEHARQAGLGPRRADLREPWLAEMAAVFAEAGLALPATGGYTSTGSRGVHSEHMGY CCCHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHH LLAEMQYLQRAYPGGAW HHHHHHHHHHHCCCCCC >Mature Secondary Structure TQSIELRRDPAVQYLLRIADTTLILAQRLGEWCGHAPILEEDIALTNMALDLVGQSRAL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHH LTRAGELEGRGHDEDQLAFLRDERDYFNLTLVELPRGDFAFTVLRNLFVAGWARLLWERL HHHCCCCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH CDSGDIEVAAIAGKAVKEVRYHQQHAIDWVVRLADGTDESRHRIEAALAQAWRYTPELFE CCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHH SDAVDEHARQAGLGPRRADLREPWLAEMAAVFAEAGLALPATGGYTSTGSRGVHSEHMGY CCCHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHH LLAEMQYLQRAYPGGAW HHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9748275; 9278503; 10766858 [H]