Definition Methylibium petroleiphilum PM1 chromosome, complete genome.
Accession NC_008825
Length 4,044,195

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The map label for this gene is 124266165

Identifier: 124266165

GI number: 124266165

Start: 1035367

End: 1036329

Strand: Direct

Name: 124266165

Synonym: Mpe_A0972

Alternate gene names: NA

Gene position: 1035367-1036329 (Clockwise)

Preceding gene: 124266164

Following gene: 124266166

Centisome position: 25.6

GC content: 69.68

Gene sequence:

>963_bases
ATGATTCGAAGCATCTTTGTCCGCGCCCTGACCGCCACGCTGGCGCTGGCCGCCGGCGGCGCCCAGGCCCAGGCCTGGCC
CACGCAGACGATCCGCATCGTCGTGCCGTACTCGCCCGGCGGTTCGTCGGACATCATCGCCCGCGCGATCTCGGGGCCGC
TGTCCGAGGCGCTGAAGCAGACGGTGATCGTCGAGAACAAGCCCGGCGCCAACGGCAACACCGGCACCGATTTCGTCGCC
AAGGCCAACGACGGCCACACGCTGCTGCTGTGCGACGTGGGCGCGCTGGCGATCACCGCTTCGGTCTACGCCAAGCTGCC
GTTCGATCCCAGCAAGGACCTGCGCGGCGTCGGCATGCTCGCCTATTCGCCGCACCTGCTGGTGGTGCACCCGTCGGTGA
AGGCCAACAACCTGCAGGAACTGGTGGCGCTGTCTCACAAGGAGCCGCTGAACTTCGCGGTCACCGCCATCGGCAGCGCG
CCGCACCTCGCCGGCGTCGCGGTCGAGAAGGCCACCAAGGCCCAGTGGACCTACATCCCGTACAAGGGCGGCGCCCAGGC
GATCGGCGACACCGTGGCCGGTCAGACCCAGGTGCTGATGAACGGCATGCTGGCGACGCTGCCACAGGTGCAGGCGGGCA
AGCTGAAGGTGCTGGGCGTCTCCAAGGCCACGCGCGTGCCGCTGCTGGCGAACGTGCCGACGATCGCCGAGCAGGGCGTG
AAGGGCTTCGAGTCGGGCACGTGGCAGGGCGTGCTGATGCCGGCGGCCACGCCGCCCGCGGTGGTGGCCAAGGTGGCGGC
CGAGCTGTCGCGCATCATCCGCTCGCCCGAAGTGCGCGAGCGCCTGGTGTCGCAGGGCGCCGAGGTCTACACGATGACGC
CGGCCGAGTTCGCCACCTTCTTCGAGCGCGAGCGCAAGAACTGGGCGAGCGTCGTCGCGCAGGGCGGGGTGAAGATCGAA
TGA

Upstream 100 bases:

>100_bases
TGGTCCGTCATCCTTCATGTTGTACGATGACGTACAACTAATGAGAGGCTTGTCGCCGCCTTGTCCGCCCCCGACCCGAC
CCCGACCGAGGAGACCCCCG

Downstream 100 bases:

>100_bases
TGTCGACGAAGCCCCGCGTGCTGCAGATCGGCCGCCTGCTGCCCTGGCTGGAGGAGCGGCTGGCGGCCGCCCACGACCTG
CACCGCCTGGCCGACGAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MIRSIFVRALTATLALAAGGAQAQAWPTQTIRIVVPYSPGGSSDIIARAISGPLSEALKQTVIVENKPGANGNTGTDFVA
KANDGHTLLLCDVGALAITASVYAKLPFDPSKDLRGVGMLAYSPHLLVVHPSVKANNLQELVALSHKEPLNFAVTAIGSA
PHLAGVAVEKATKAQWTYIPYKGGAQAIGDTVAGQTQVLMNGMLATLPQVQAGKLKVLGVSKATRVPLLANVPTIAEQGV
KGFESGTWQGVLMPAATPPAVVAKVAAELSRIIRSPEVRERLVSQGAEVYTMTPAEFATFFERERKNWASVVAQGGVKIE

Sequences:

>Translated_320_residues
MIRSIFVRALTATLALAAGGAQAQAWPTQTIRIVVPYSPGGSSDIIARAISGPLSEALKQTVIVENKPGANGNTGTDFVA
KANDGHTLLLCDVGALAITASVYAKLPFDPSKDLRGVGMLAYSPHLLVVHPSVKANNLQELVALSHKEPLNFAVTAIGSA
PHLAGVAVEKATKAQWTYIPYKGGAQAIGDTVAGQTQVLMNGMLATLPQVQAGKLKVLGVSKATRVPLLANVPTIAEQGV
KGFESGTWQGVLMPAATPPAVVAKVAAELSRIIRSPEVRERLVSQGAEVYTMTPAEFATFFERERKNWASVVAQGGVKIE
>Mature_320_residues
MIRSIFVRALTATLALAAGGAQAQAWPTQTIRIVVPYSPGGSSDIIARAISGPLSEALKQTVIVENKPGANGNTGTDFVA
KANDGHTLLLCDVGALAITASVYAKLPFDPSKDLRGVGMLAYSPHLLVVHPSVKANNLQELVALSHKEPLNFAVTAIGSA
PHLAGVAVEKATKAQWTYIPYKGGAQAIGDTVAGQTQVLMNGMLATLPQVQAGKLKVLGVSKATRVPLLANVPTIAEQGV
KGFESGTWQGVLMPAATPPAVVAKVAAELSRIIRSPEVRERLVSQGAEVYTMTPAEFATFFERERKNWASVVAQGGVKIE

Specific function: Unknown

COG id: COG3181

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0065 (bug) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005064 [H]

Pfam domain/function: PF03401 Bug [H]

EC number: NA

Molecular weight: Translated: 33489; Mature: 33489

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRSIFVRALTATLALAAGGAQAQAWPTQTIRIVVPYSPGGSSDIIARAISGPLSEALKQ
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHH
TVIVENKPGANGNTGTDFVAKANDGHTLLLCDVGALAITASVYAKLPFDPSKDLRGVGML
HEEEECCCCCCCCCCCCEEEECCCCCEEEEEECCHHHHHHHHHEECCCCCCCCCCCCEEE
AYSPHLLVVHPSVKANNLQELVALSHKEPLNFAVTAIGSAPHLAGVAVEKATKAQWTYIP
EECCEEEEEECCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHCCCCEEEEEE
YKGGAQAIGDTVAGQTQVLMNGMLATLPQVQAGKLKVLGVSKATRVPLLANVPTIAEQGV
CCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCEEECCCHHHHHCC
KGFESGTWQGVLMPAATPPAVVAKVAAELSRIIRSPEVRERLVSQGAEVYTMTPAEFATF
CCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEEECHHHHHHH
FERERKNWASVVAQGGVKIE
HHHHHHHHHHHHHCCCEECC
>Mature Secondary Structure
MIRSIFVRALTATLALAAGGAQAQAWPTQTIRIVVPYSPGGSSDIIARAISGPLSEALKQ
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHH
TVIVENKPGANGNTGTDFVAKANDGHTLLLCDVGALAITASVYAKLPFDPSKDLRGVGML
HEEEECCCCCCCCCCCCEEEECCCCCEEEEEECCHHHHHHHHHEECCCCCCCCCCCCEEE
AYSPHLLVVHPSVKANNLQELVALSHKEPLNFAVTAIGSAPHLAGVAVEKATKAQWTYIP
EECCEEEEEECCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHCCCCEEEEEE
YKGGAQAIGDTVAGQTQVLMNGMLATLPQVQAGKLKVLGVSKATRVPLLANVPTIAEQGV
CCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCEEECCCHHHHHCC
KGFESGTWQGVLMPAATPPAVVAKVAAELSRIIRSPEVRERLVSQGAEVYTMTPAEFATF
CCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEEECHHHHHHH
FERERKNWASVVAQGGVKIE
HHHHHHHHHHHHHCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2013566 [H]