| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is 124266159
Identifier: 124266159
GI number: 124266159
Start: 1027116
End: 1028207
Strand: Direct
Name: 124266159
Synonym: Mpe_A0966
Alternate gene names: NA
Gene position: 1027116-1028207 (Clockwise)
Preceding gene: 124266158
Following gene: 124266160
Centisome position: 25.4
GC content: 75.92
Gene sequence:
>1092_bases ATGTCTCCATCGCGCTCGTTGATCGCGCTCACCGCGGCGCTGTGCCTGGCGGTCGCCGCCGCCGTGCCGGTCGGCGCTGC CGGCACCGCGGCACCGCGCTTCGGCGTGCTGCAGCAGGCCGCGCTGCAGTCGCCGCGGGCGCTGTCGGCCACGATGCTCG CGGTGGCGGCCGCCGGGAAGCGACTGGTCGCCGTTGGCGAGCGCGGCATCGTGCTGCTGTCCGACGACGGCGGCGCCCGC TGGCGCCAGGCGGCCACCCCCGTGCGGGCCAGCCTGACGGCGGTGCAGTTTGTCGACGAACGGCAGGGCTGGGCCGTCGG CCACCTCGGCGTCGTGCTGCATTCCGGCGACGGCGGCGAAACGTGGACCAAGCAGCTCGACGGGCTGCAGCTGCCGGCGC TGTTCGAGCAGGCGGCACGCGCCGACGCGGCCGCCGCGCCGGCCTACCGCGACTACGTCCAGCTGCTTGCCGACGACGGC CCCGACAAGCCGCTGCTCGCGCTGCACTTCCAGGACGCTCGGCGCGGCATCGTCGTCGGCGCCTACAACCTCGCGCTCGG CACGGAGGACGGTGGCGCCACCTGGACGCCGCTGAGCGCTCGACTGCCCAACCCGCGCTCGCTGCACCTCTACGGCGTCG CGGTCAGCGGCGCCTCGATCGTGCTGGCCGGCGAGCAGGGCCTGCTGCTGCGCTCCGACAACGGCGGCCGTGATTTCGCC GCGCTGGAGTCGCCCTACCGGGGCAGCTGGTTCGGCCTGCTGGCCACCCGCGGCGACCGCCTGCTGGTCTACGGACTGCG CGGTGCGGCCTACGTGTCGGCCGACCGCGGCTCGAGCTGGACCCAGGCGAGCACCGAGCTGCCCGTCTCGATCAGCGGCG CGGCCGAACTGGCCGATGGCACGCTCGTGCTCGGCAGCTCGGCCGGCGACCTGCTGGTCAGCCGTGACCAGGGGCGCAGC TTCCAGCGCCGCGACGGACCGCCCCAGCCGCCGATCGCCGGCCTGGTGCCCACGCAGGACGGCGCCCTCGCACTGGCCGG GCTGCGGGGTCCGCAGCGCGTGGACCTGGCTGCCCCGCCCGCCGCCCGCTGA
Upstream 100 bases:
>100_bases TGAAGTCTCCTCGCTTCGGCCCGGCAGACACAGGAACCCTCGGGGTCCGACCGGGCCGCTTTTTTCTCCACTTCGACGCT CCATGTCCAGGGAACTGCCG
Downstream 100 bases:
>100_bases CGCCGCGGCGCTGTTCCTTCATCGACACCATCCATGCACGCAGACTCCAGCCTCGACCCGCATCCCGTGATCGCGCGCGT CGAAGACTTCGATCGCCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: Glycosyl Hydrolase; BNR Repeat-Containing Protein; BNR/Asp-Box Repeat-Containing Protein; BNR Domain-Containing Protein; Glycosyl Hydrolase BNR Repeat Protein; Glycosyl Hydrolase BNR Repeat; BNR/Asp-Box Repeat Protein; BNR/Asp-Box Repeat Domain Protein; Plant Photosystem II Stability/Assembly Factor Protein; Glycosyl Hydrolase BNR Repeat-Containing Glycosyl Hydrolase; Protein Related Photosystem II Stability/Assembly Factor; Oxidoreductase; Two Component Regulator Propeller Domain-Containing Protein
Number of amino acids: Translated: 363; Mature: 362
Protein sequence:
>363_residues MSPSRSLIALTAALCLAVAAAVPVGAAGTAAPRFGVLQQAALQSPRALSATMLAVAAAGKRLVAVGERGIVLLSDDGGAR WRQAATPVRASLTAVQFVDERQGWAVGHLGVVLHSGDGGETWTKQLDGLQLPALFEQAARADAAAAPAYRDYVQLLADDG PDKPLLALHFQDARRGIVVGAYNLALGTEDGGATWTPLSARLPNPRSLHLYGVAVSGASIVLAGEQGLLLRSDNGGRDFA ALESPYRGSWFGLLATRGDRLLVYGLRGAAYVSADRGSSWTQASTELPVSISGAAELADGTLVLGSSAGDLLVSRDQGRS FQRRDGPPQPPIAGLVPTQDGALALAGLRGPQRVDLAAPPAAR
Sequences:
>Translated_363_residues MSPSRSLIALTAALCLAVAAAVPVGAAGTAAPRFGVLQQAALQSPRALSATMLAVAAAGKRLVAVGERGIVLLSDDGGAR WRQAATPVRASLTAVQFVDERQGWAVGHLGVVLHSGDGGETWTKQLDGLQLPALFEQAARADAAAAPAYRDYVQLLADDG PDKPLLALHFQDARRGIVVGAYNLALGTEDGGATWTPLSARLPNPRSLHLYGVAVSGASIVLAGEQGLLLRSDNGGRDFA ALESPYRGSWFGLLATRGDRLLVYGLRGAAYVSADRGSSWTQASTELPVSISGAAELADGTLVLGSSAGDLLVSRDQGRS FQRRDGPPQPPIAGLVPTQDGALALAGLRGPQRVDLAAPPAAR >Mature_362_residues SPSRSLIALTAALCLAVAAAVPVGAAGTAAPRFGVLQQAALQSPRALSATMLAVAAAGKRLVAVGERGIVLLSDDGGARW RQAATPVRASLTAVQFVDERQGWAVGHLGVVLHSGDGGETWTKQLDGLQLPALFEQAARADAAAAPAYRDYVQLLADDGP DKPLLALHFQDARRGIVVGAYNLALGTEDGGATWTPLSARLPNPRSLHLYGVAVSGASIVLAGEQGLLLRSDNGGRDFAA LESPYRGSWFGLLATRGDRLLVYGLRGAAYVSADRGSSWTQASTELPVSISGAAELADGTLVLGSSAGDLLVSRDQGRSF QRRDGPPQPPIAGLVPTQDGALALAGLRGPQRVDLAAPPAAR
Specific function: Unknown
COG id: COG4447
COG function: function code R; Uncharacterized protein related to plant photosystem II stability/assembly factor
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37325; Mature: 37193
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPSRSLIALTAALCLAVAAAVPVGAAGTAAPRFGVLQQAALQSPRALSATMLAVAAAGK CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCC RLVAVGERGIVLLSDDGGARWRQAATPVRASLTAVQFVDERQGWAVGHLGVVLHSGDGGE EEEEECCCCEEEEECCCCCCHHHHCCCHHHHHHHEEEHHCCCCEEEEEEEEEEECCCCCC TWTKQLDGLQLPALFEQAARADAAAAPAYRDYVQLLADDGPDKPLLALHFQDARRGIVVG HHHHHHCCCCCHHHHHHHHHCCHHCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEE AYNLALGTEDGGATWTPLSARLPNPRSLHLYGVAVSGASIVLAGEQGLLLRSDNGGRDFA EEEEEEECCCCCCEECCCCCCCCCCCEEEEEEEEECCCEEEEECCCCEEEECCCCCCCHH ALESPYRGSWFGLLATRGDRLLVYGLRGAAYVSADRGSSWTQASTELPVSISGAAELADG HHCCCCCCCEEEEEEECCCEEEEEECCCEEEEECCCCCCCCCCCCCCCEEECCCCCCCCC TLVLGSSAGDLLVSRDQGRSFQRRDGPPQPPIAGLVPTQDGALALAGLRGPQRVDLAAPP EEEEECCCCCEEEECCCCCCCHHCCCCCCCCCEEEEECCCCCEEEEECCCCCEEEECCCC AAR CCC >Mature Secondary Structure SPSRSLIALTAALCLAVAAAVPVGAAGTAAPRFGVLQQAALQSPRALSATMLAVAAAGK CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCC RLVAVGERGIVLLSDDGGARWRQAATPVRASLTAVQFVDERQGWAVGHLGVVLHSGDGGE EEEEECCCCEEEEECCCCCCHHHHCCCHHHHHHHEEEHHCCCCEEEEEEEEEEECCCCCC TWTKQLDGLQLPALFEQAARADAAAAPAYRDYVQLLADDGPDKPLLALHFQDARRGIVVG HHHHHHCCCCCHHHHHHHHHCCHHCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEE AYNLALGTEDGGATWTPLSARLPNPRSLHLYGVAVSGASIVLAGEQGLLLRSDNGGRDFA EEEEEEECCCCCCEECCCCCCCCCCCEEEEEEEEECCCEEEEECCCCEEEECCCCCCCHH ALESPYRGSWFGLLATRGDRLLVYGLRGAAYVSADRGSSWTQASTELPVSISGAAELADG HHCCCCCCCEEEEEEECCCEEEEEECCCEEEEECCCCCCCCCCCCCCCEEECCCCCCCCC TLVLGSSAGDLLVSRDQGRSFQRRDGPPQPPIAGLVPTQDGALALAGLRGPQRVDLAAPP EEEEECCCCCEEEECCCCCCCHHCCCCCCCCCEEEEECCCCCEEEEECCCCCEEEECCCC AAR CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA