Definition Methylibium petroleiphilum PM1 chromosome, complete genome.
Accession NC_008825
Length 4,044,195

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The map label for this gene is 124266160

Identifier: 124266160

GI number: 124266160

Start: 1028241

End: 1030682

Strand: Direct

Name: 124266160

Synonym: Mpe_A0967

Alternate gene names: NA

Gene position: 1028241-1030682 (Clockwise)

Preceding gene: 124266159

Following gene: 124266161

Centisome position: 25.43

GC content: 68.59

Gene sequence:

>2442_bases
ATGCACGCAGACTCCAGCCTCGACCCGCATCCCGTGATCGCGCGCGTCGAAGACTTCGATCGCCGCTCGGGCAACTTGCT
CGAGCGCGCCTTCTTCAACTTCCGACCGCTCGTCGTCATCGCCTGCCTGCTGGTCACGCTGCTGCTCGGCTGGCAGGCCG
GCAAGCTGCAGCTCAATGCCAGCTTCGAGAAGATGATCCCGACCACGCACCCGTACGTGATCAACTTCCTCGAGTACCGC
GGCAAGCTCAGCGGCCTGGGCAACTCGGTGCGCATCGCGGTCGAGACGACCTCGGGCGACATCTACGACAAGACCTACCT
CGAGACCCTCGCACGCATCAACGACGAGGTGTTCCTGCTGCCCGGCGTGGATCGCGCCTACATGAAGTCGCTGTGGACGC
CGGCGGTGCGCTGGACGGCGGTGACCGAGGAGGGCCTGGAGGGCGGCACGGTGATCTCCGAGGACTACGACGGATCGCCG
CAGGCGCTGCAGAAGGTGCGCTCCAACATCGAGCGCTCGGGGCAGATCGGGCAGCTCGTCGCGAACGACTTCAAGTCCAG
CATCATCTACGTGCCGCTGCTCAGCCGCATCGAGGCCACCGGCCAGGCGCTCGACTACGCCGAGTTCGCGCGCCAGGTGG
AGGCGCTGCGCGCGAAGCACGAGTCGGCCACGATCCGCATCCACATCACCGGCTTCGCCAAGATCATCGGCGACCTGATC
GACGGGCTGGCGGAGGTGCTGAAGTACTTCGCGGTGGCGATCGTGATCGCTGCGGCCATGGTCTGCGCGTACAGCCGCGA
CCTGCGCAGCACGCTGCTGGTGGTGTCGGTCTCGCTGGTGGCGGTGGTGTGGCAACTCGGGCTGCTGCCCACGCTGGGCT
TCCGGCTCGACCCGTTCTCGATGCTGGTGCCGTTCCTGGTGTTCGCGATCGGCATGAGCCATGGCGCGCAGAAGATGAAC
GGCATCATGCAGGACATCGGCCGCGGCACGCACAAGCTGGTGGCGGCCCGCTACACCTTCCGCCGCCTCTTCCTCGCCGG
GCTGACCGCGTTGCTGGCCGATGCGGTGGGCTTCGCGGTGCTGCTGGTGATCGACATCCTGGTGATCAAGGAGCTCGCGC
TCGCGGCGAGCCTGGGCGTGGGCGTGCTGATCTTCACCAACCTGATCCTGCTGCCGGTGCTGCTGTCCTACACCGGCGTG
AGCCGCCGGGCGGCCGAGCGCAGCCTGCGCACCGAGCTGGCCGACAGCGCCGGCGGCGAGCGGCACCGCGTCTGGCACAC
GCTGGTGCGCTTCACGGAGCGCAAGTGGGCGCTGGGCGCGATCGCGGTGTCGGCCGGTCTGGCGGCGCTCGGCTTCGCGG
CCAGCCTGCACCTGCAGATCGGCGACCTGGACCCCGGCGCGCCGGAGCTGCGCCCCGAGTCGCGCTACAACCGCGACAGC
GCCTTCATGGTCGCCAACTACGCCGCCAGCGCCGACATCCTGGTGGTGATGGTCAAGACCGCCGACAAGGGCTGCGTGAG
CTACCCGGTGGTGTCGCGCATCGACGAGCTGGCCTGGGCCCTGGAGCAGCTGCCCGGCGTCGACTCCACCAGCTCGGCCC
CCGCGCTCGCCAAGCTGTCCTCGGTGGGCTACAACGAGGGCAACCTCAAGTGGTACGAGCTGGTGCCGAACGAAGCCGCG
CTCGGCACCCTGCTCACCTACGCGCCGCGCGAGCTGTTGCCGGCGAGCTGCGACCTGCTGCCGCTCTACGTCTACCTGAA
GGACCACAAGGCGGCCACGCTCAGCCGCGTGGTCGAGACCGTGGAGGCCTTCAAGGCTCAGCACGACTCCGACGAGGCGC
GCTTCCTGCTGGCCGCCGGCAGCGCCGGCATCGAGGCGGCGACCAACATCGTCGTGCAGCGCGCCTGGTACGAGATGCTG
GCGCTGGTCTACGGTGCCGTGGTGGTGCTGTGCTTCGTGACCTTCCGATCCTGGCGGGCCGTGGTGGTGGCGGTGCTGCC
GCTGATGCTGACCTCGCTGCTGGCCGAGGCGCTGATGGTCATGCTGGGCATCGGCGTCAAGGTCGCGACGCTGCCGGTCA
TCGCGCTCGGCGTGGGCATCGGCGTGGACTACGCGCTGTACATCCTGTCGGTGATGCTGGCCCGGCTGCGTGCGGGCCAC
ACGCTGGCCCAGGCCTATTACGGGGCACTGCTGTTCACCGGCAAGGTGGTGATGCTGACCGGCCTGACGCTGGCCCTGGG
TGTGGCGACCTGGGCGTTCTCGGACATCAAGTTCCAGGCCGACATGGGCATCCTGCTCGCCTTCATGTTCCTCTGGAACA
TGCTGGGCGCACTGATCCTGCTGCCGGCGCTGGCCTGCTTCATGTTGAAGCCCACGGTGGTGCGCAGCGACCGGGCCGCC
GACCCGGCGGTGCCCGAGGAACGCCACAAGCTGGCCGCCTGA

Upstream 100 bases:

>100_bases
CCTCGCACTGGCCGGGCTGCGGGGTCCGCAGCGCGTGGACCTGGCTGCCCCGCCCGCCGCCCGCTGACGCCGCGGCGCTG
TTCCTTCATCGACACCATCC

Downstream 100 bases:

>100_bases
GAGCCTGAAGCCCGTCCGCTCGCCGCGCCGGGCAGCGCGACGATGTGGATGGTAGCGGTGTCATCTCCACTACACTCGTG
AGATGACAGCGCCCGACGCC

Product: putative transporter

Products: NA

Alternate protein names: RND Superfamily Exporter; Patched Family Protein; Exporter Of RND Superfamily Protein; Transporter Protein; Exporter Of RND Superfamily; RND Family Multidrug Efflux Transporter; RND Superfamily Transporter; Exporter; Exporters Of RND Superfamily; RND Family Transporter; RND Family Efflux Transporter

Number of amino acids: Translated: 813; Mature: 813

Protein sequence:

>813_residues
MHADSSLDPHPVIARVEDFDRRSGNLLERAFFNFRPLVVIACLLVTLLLGWQAGKLQLNASFEKMIPTTHPYVINFLEYR
GKLSGLGNSVRIAVETTSGDIYDKTYLETLARINDEVFLLPGVDRAYMKSLWTPAVRWTAVTEEGLEGGTVISEDYDGSP
QALQKVRSNIERSGQIGQLVANDFKSSIIYVPLLSRIEATGQALDYAEFARQVEALRAKHESATIRIHITGFAKIIGDLI
DGLAEVLKYFAVAIVIAAAMVCAYSRDLRSTLLVVSVSLVAVVWQLGLLPTLGFRLDPFSMLVPFLVFAIGMSHGAQKMN
GIMQDIGRGTHKLVAARYTFRRLFLAGLTALLADAVGFAVLLVIDILVIKELALAASLGVGVLIFTNLILLPVLLSYTGV
SRRAAERSLRTELADSAGGERHRVWHTLVRFTERKWALGAIAVSAGLAALGFAASLHLQIGDLDPGAPELRPESRYNRDS
AFMVANYAASADILVVMVKTADKGCVSYPVVSRIDELAWALEQLPGVDSTSSAPALAKLSSVGYNEGNLKWYELVPNEAA
LGTLLTYAPRELLPASCDLLPLYVYLKDHKAATLSRVVETVEAFKAQHDSDEARFLLAAGSAGIEAATNIVVQRAWYEML
ALVYGAVVVLCFVTFRSWRAVVVAVLPLMLTSLLAEALMVMLGIGVKVATLPVIALGVGIGVDYALYILSVMLARLRAGH
TLAQAYYGALLFTGKVVMLTGLTLALGVATWAFSDIKFQADMGILLAFMFLWNMLGALILLPALACFMLKPTVVRSDRAA
DPAVPEERHKLAA

Sequences:

>Translated_813_residues
MHADSSLDPHPVIARVEDFDRRSGNLLERAFFNFRPLVVIACLLVTLLLGWQAGKLQLNASFEKMIPTTHPYVINFLEYR
GKLSGLGNSVRIAVETTSGDIYDKTYLETLARINDEVFLLPGVDRAYMKSLWTPAVRWTAVTEEGLEGGTVISEDYDGSP
QALQKVRSNIERSGQIGQLVANDFKSSIIYVPLLSRIEATGQALDYAEFARQVEALRAKHESATIRIHITGFAKIIGDLI
DGLAEVLKYFAVAIVIAAAMVCAYSRDLRSTLLVVSVSLVAVVWQLGLLPTLGFRLDPFSMLVPFLVFAIGMSHGAQKMN
GIMQDIGRGTHKLVAARYTFRRLFLAGLTALLADAVGFAVLLVIDILVIKELALAASLGVGVLIFTNLILLPVLLSYTGV
SRRAAERSLRTELADSAGGERHRVWHTLVRFTERKWALGAIAVSAGLAALGFAASLHLQIGDLDPGAPELRPESRYNRDS
AFMVANYAASADILVVMVKTADKGCVSYPVVSRIDELAWALEQLPGVDSTSSAPALAKLSSVGYNEGNLKWYELVPNEAA
LGTLLTYAPRELLPASCDLLPLYVYLKDHKAATLSRVVETVEAFKAQHDSDEARFLLAAGSAGIEAATNIVVQRAWYEML
ALVYGAVVVLCFVTFRSWRAVVVAVLPLMLTSLLAEALMVMLGIGVKVATLPVIALGVGIGVDYALYILSVMLARLRAGH
TLAQAYYGALLFTGKVVMLTGLTLALGVATWAFSDIKFQADMGILLAFMFLWNMLGALILLPALACFMLKPTVVRSDRAA
DPAVPEERHKLAA
>Mature_813_residues
MHADSSLDPHPVIARVEDFDRRSGNLLERAFFNFRPLVVIACLLVTLLLGWQAGKLQLNASFEKMIPTTHPYVINFLEYR
GKLSGLGNSVRIAVETTSGDIYDKTYLETLARINDEVFLLPGVDRAYMKSLWTPAVRWTAVTEEGLEGGTVISEDYDGSP
QALQKVRSNIERSGQIGQLVANDFKSSIIYVPLLSRIEATGQALDYAEFARQVEALRAKHESATIRIHITGFAKIIGDLI
DGLAEVLKYFAVAIVIAAAMVCAYSRDLRSTLLVVSVSLVAVVWQLGLLPTLGFRLDPFSMLVPFLVFAIGMSHGAQKMN
GIMQDIGRGTHKLVAARYTFRRLFLAGLTALLADAVGFAVLLVIDILVIKELALAASLGVGVLIFTNLILLPVLLSYTGV
SRRAAERSLRTELADSAGGERHRVWHTLVRFTERKWALGAIAVSAGLAALGFAASLHLQIGDLDPGAPELRPESRYNRDS
AFMVANYAASADILVVMVKTADKGCVSYPVVSRIDELAWALEQLPGVDSTSSAPALAKLSSVGYNEGNLKWYELVPNEAA
LGTLLTYAPRELLPASCDLLPLYVYLKDHKAATLSRVVETVEAFKAQHDSDEARFLLAAGSAGIEAATNIVVQRAWYEML
ALVYGAVVVLCFVTFRSWRAVVVAVLPLMLTSLLAEALMVMLGIGVKVATLPVIALGVGIGVDYALYILSVMLARLRAGH
TLAQAYYGALLFTGKVVMLTGLTLALGVATWAFSDIKFQADMGILLAFMFLWNMLGALILLPALACFMLKPTVVRSDRAA
DPAVPEERHKLAA

Specific function: Unknown

COG id: COG1033

COG function: function code R; Predicted exporters of the RND superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 88227; Mature: 88227

Theoretical pI: Translated: 7.20; Mature: 7.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHADSSLDPHPVIARVEDFDRRSGNLLERAFFNFRPLVVIACLLVTLLLGWQAGKLQLNA
CCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEECC
SFEKMIPTTHPYVINFLEYRGKLSGLGNSVRIAVETTSGDIYDKTYLETLARINDEVFLL
CHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCEEEE
PGVDRAYMKSLWTPAVRWTAVTEEGLEGGTVISEDYDGSPQALQKVRSNIERSGQIGQLV
CCCCHHHHHHHCCCHHEEEEECCCCCCCCCEECCCCCCCHHHHHHHHHHHHHCCCHHHHH
ANDFKSSIIYVPLLSRIEATGQALDYAEFARQVEALRAKHESATIRIHITGFAKIIGDLI
HHHHHCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHH
DGLAEVLKYFAVAIVIAAAMVCAYSRDLRSTLLVVSVSLVAVVWQLGLLPTLGFRLDPFS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
MLVPFLVFAIGMSHGAQKMNGIMQDIGRGTHKLVAARYTFRRLFLAGLTALLADAVGFAV
HHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLVIDILVIKELALAASLGVGVLIFTNLILLPVLLSYTGVSRRAAERSLRTELADSAGGE
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC
RHRVWHTLVRFTERKWALGAIAVSAGLAALGFAASLHLQIGDLDPGAPELRPESRYNRDS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCC
AFMVANYAASADILVVMVKTADKGCVSYPVVSRIDELAWALEQLPGVDSTSSAPALAKLS
EEEEEECCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
SVGYNEGNLKWYELVPNEAALGTLLTYAPRELLPASCDLLPLYVYLKDHKAATLSRVVET
HCCCCCCCEEEEEECCCCHHHHHHHHHCCHHHCCCCCCCEEEEEEEECCHHHHHHHHHHH
VEAFKAQHDSDEARFLLAAGSAGIEAATNIVVQRAWYEMLALVYGAVVVLCFVTFRSWRA
HHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVVAVLPLMLTSLLAEALMVMLGIGVKVATLPVIALGVGIGVDYALYILSVMLARLRAGH
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
TLAQAYYGALLFTGKVVMLTGLTLALGVATWAFSDIKFQADMGILLAFMFLWNMLGALIL
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCEEECHHHHHHHHHHHHHHHHHHHH
LPALACFMLKPTVVRSDRAADPAVPEERHKLAA
HHHHHHHHHCCHHCCCCCCCCCCCCHHHHCCCC
>Mature Secondary Structure
MHADSSLDPHPVIARVEDFDRRSGNLLERAFFNFRPLVVIACLLVTLLLGWQAGKLQLNA
CCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEECC
SFEKMIPTTHPYVINFLEYRGKLSGLGNSVRIAVETTSGDIYDKTYLETLARINDEVFLL
CHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCEEEE
PGVDRAYMKSLWTPAVRWTAVTEEGLEGGTVISEDYDGSPQALQKVRSNIERSGQIGQLV
CCCCHHHHHHHCCCHHEEEEECCCCCCCCCEECCCCCCCHHHHHHHHHHHHHCCCHHHHH
ANDFKSSIIYVPLLSRIEATGQALDYAEFARQVEALRAKHESATIRIHITGFAKIIGDLI
HHHHHCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHH
DGLAEVLKYFAVAIVIAAAMVCAYSRDLRSTLLVVSVSLVAVVWQLGLLPTLGFRLDPFS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
MLVPFLVFAIGMSHGAQKMNGIMQDIGRGTHKLVAARYTFRRLFLAGLTALLADAVGFAV
HHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLVIDILVIKELALAASLGVGVLIFTNLILLPVLLSYTGVSRRAAERSLRTELADSAGGE
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC
RHRVWHTLVRFTERKWALGAIAVSAGLAALGFAASLHLQIGDLDPGAPELRPESRYNRDS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCC
AFMVANYAASADILVVMVKTADKGCVSYPVVSRIDELAWALEQLPGVDSTSSAPALAKLS
EEEEEECCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
SVGYNEGNLKWYELVPNEAALGTLLTYAPRELLPASCDLLPLYVYLKDHKAATLSRVVET
HCCCCCCCEEEEEECCCCHHHHHHHHHCCHHHCCCCCCCEEEEEEEECCHHHHHHHHHHH
VEAFKAQHDSDEARFLLAAGSAGIEAATNIVVQRAWYEMLALVYGAVVVLCFVTFRSWRA
HHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVVAVLPLMLTSLLAEALMVMLGIGVKVATLPVIALGVGIGVDYALYILSVMLARLRAGH
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
TLAQAYYGALLFTGKVVMLTGLTLALGVATWAFSDIKFQADMGILLAFMFLWNMLGALIL
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCEEECHHHHHHHHHHHHHHHHHHHH
LPALACFMLKPTVVRSDRAADPAVPEERHKLAA
HHHHHHHHHCCHHCCCCCCCCCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA