| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is 124266158
Identifier: 124266158
GI number: 124266158
Start: 1025627
End: 1027018
Strand: Direct
Name: 124266158
Synonym: Mpe_A0965
Alternate gene names: NA
Gene position: 1025627-1027018 (Clockwise)
Preceding gene: 124266157
Following gene: 124266159
Centisome position: 25.36
GC content: 66.45
Gene sequence:
>1392_bases ATGGAGACCGGCATGAACAAGACCCCCAAGATTTCGTTCGCCGTCGCGCTCGCGCTGGCATCCCTCGCCGCGCAGCCGGT GCTCGCTGCGGTGAGCGCCGAAGAAGCCGCCAAGCTCAAGACCACGCTCACGCCGCTGGGCGCCGAGAAGGCCGGCAACG CCGACGGCTCGATCCCGGCCTGGGACGGCGGCTACACCAAGGTCGCGCCGGGCTGGAAGAACGGCCAGCCGAGACCCGAT CCGTTCGCGGCGGAGAAGCCGGTGGCGTCGATCTCGGCCAAGAACGCCGCGCAGTACGACGCCCGGCTGAGCGAGGGCGT CAAGACGCTGATGAAGAAGTACCCCGACTTCCGCATCGACGTGTACCCGACGCACCGCAGCGCGGCCGCGCCGGCCTGGG TGTACGAGAACACCTTCAAGAACGCGACCTCCGCGAAGGTGGCCGACAACGGCTACGGCGTGGTCGACGCCTACGGCGGC ATCCCGTTCCCGATTCCCAAGACCGGCATCGAGGTGATGCTCAACGCGCGGCTGGCCTGGGAGGGCGTGGCACAGAAGTA CCAGCTCAACACCTGGGTGGTCACCGGCGACGGGCACCGCACGCTGTCGTCGGCCGGGCTGATGTCGTGGTTGTGGCCGT ACTACTACAAGGATGCGCGCGACAGCTACCTGGCCAAGCCGACCCATTACAAGATGGGGTCCTTCGTCAAGTCGGATCCG TCGGCGGTGGCCGGTGAAGTGATCCTGCTGCACGAGACCGTGAACGAGGAGAAGGTGCCGCGTGGCGTGTGGCAGTACCT GGTGGGCCAGCGCCGCGTGCGCAAGGCACCCTCGATCGCCTACGACACGCCGGACACCGTGACCTCGGGCACCGGGCTGT TCGACGAGTCCTTCGGCACCATGGGCCCGATCGACCGTCACGAGTACAAGATCGTCGGCAAGCAGGAGATGTACATCCCG TACAACTCCAACAAGACGGCGCTGGCCAAGGTCGACGAGCTGGTGACGCCGAAGTTCCTCAACCCCGACCACGTGCGCTG GGAGCTGCACCGCGTTTGGGTCGTCGAGGCGACGCTGCTGCCCGGCAAGCGCCACGTGATGACCAAGCGCCGCTACTACA TCGACGAGGACGGCTGGAAGATGGTCATGGCCGACCACTGGGACGCGCAGGGCCAGCTCTACCACCTGCAGTACACGCTG CCCTACCTGGCGCCCGACATCCCCGCCGTCGTGAGCACGGTGCAGTGGGGAATCATCAACCTGCTGACGGGCCAGTACTA CTACAACTGCAACTTCAACGACCTGCCGCAGCACTTCCCCGTGCCCGAAGTGCCGAAGCAGCTCAACGAAGCCATGTTGA GCCCCGAGGCCATCGCCACCGGGGCGCGCTGA
Upstream 100 bases:
>100_bases CCTTCCTCACGCCGGCCAACTCGCCCACGCCGGTGCTCTCCTACAAGCAGTTCTACAAGGACCGCAACTTCATTTCCTTC TCGCTGCAGCGTGCCCTTTG
Downstream 100 bases:
>100_bases AGTCTCCTCGCTTCGGCCCGGCAGACACAGGAACCCTCGGGGTCCGACCGGGCCGCTTTTTTCTCCACTTCGACGCTCCA TGTCCAGGGAACTGCCGATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 463; Mature: 463
Protein sequence:
>463_residues METGMNKTPKISFAVALALASLAAQPVLAAVSAEEAAKLKTTLTPLGAEKAGNADGSIPAWDGGYTKVAPGWKNGQPRPD PFAAEKPVASISAKNAAQYDARLSEGVKTLMKKYPDFRIDVYPTHRSAAAPAWVYENTFKNATSAKVADNGYGVVDAYGG IPFPIPKTGIEVMLNARLAWEGVAQKYQLNTWVVTGDGHRTLSSAGLMSWLWPYYYKDARDSYLAKPTHYKMGSFVKSDP SAVAGEVILLHETVNEEKVPRGVWQYLVGQRRVRKAPSIAYDTPDTVTSGTGLFDESFGTMGPIDRHEYKIVGKQEMYIP YNSNKTALAKVDELVTPKFLNPDHVRWELHRVWVVEATLLPGKRHVMTKRRYYIDEDGWKMVMADHWDAQGQLYHLQYTL PYLAPDIPAVVSTVQWGIINLLTGQYYYNCNFNDLPQHFPVPEVPKQLNEAMLSPEAIATGAR
Sequences:
>Translated_463_residues METGMNKTPKISFAVALALASLAAQPVLAAVSAEEAAKLKTTLTPLGAEKAGNADGSIPAWDGGYTKVAPGWKNGQPRPD PFAAEKPVASISAKNAAQYDARLSEGVKTLMKKYPDFRIDVYPTHRSAAAPAWVYENTFKNATSAKVADNGYGVVDAYGG IPFPIPKTGIEVMLNARLAWEGVAQKYQLNTWVVTGDGHRTLSSAGLMSWLWPYYYKDARDSYLAKPTHYKMGSFVKSDP SAVAGEVILLHETVNEEKVPRGVWQYLVGQRRVRKAPSIAYDTPDTVTSGTGLFDESFGTMGPIDRHEYKIVGKQEMYIP YNSNKTALAKVDELVTPKFLNPDHVRWELHRVWVVEATLLPGKRHVMTKRRYYIDEDGWKMVMADHWDAQGQLYHLQYTL PYLAPDIPAVVSTVQWGIINLLTGQYYYNCNFNDLPQHFPVPEVPKQLNEAMLSPEAIATGAR >Mature_463_residues METGMNKTPKISFAVALALASLAAQPVLAAVSAEEAAKLKTTLTPLGAEKAGNADGSIPAWDGGYTKVAPGWKNGQPRPD PFAAEKPVASISAKNAAQYDARLSEGVKTLMKKYPDFRIDVYPTHRSAAAPAWVYENTFKNATSAKVADNGYGVVDAYGG IPFPIPKTGIEVMLNARLAWEGVAQKYQLNTWVVTGDGHRTLSSAGLMSWLWPYYYKDARDSYLAKPTHYKMGSFVKSDP SAVAGEVILLHETVNEEKVPRGVWQYLVGQRRVRKAPSIAYDTPDTVTSGTGLFDESFGTMGPIDRHEYKIVGKQEMYIP YNSNKTALAKVDELVTPKFLNPDHVRWELHRVWVVEATLLPGKRHVMTKRRYYIDEDGWKMVMADHWDAQGQLYHLQYTL PYLAPDIPAVVSTVQWGIINLLTGQYYYNCNFNDLPQHFPVPEVPKQLNEAMLSPEAIATGAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010752 [H]
Pfam domain/function: PF07044 DUF1329 [H]
EC number: NA
Molecular weight: Translated: 51359; Mature: 51359
Theoretical pI: Translated: 8.61; Mature: 8.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METGMNKTPKISFAVALALASLAAQPVLAAVSAEEAAKLKTTLTPLGAEKAGNADGSIPA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCCC WDGGYTKVAPGWKNGQPRPDPFAAEKPVASISAKNAAQYDARLSEGVKTLMKKYPDFRID CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEE VYPTHRSAAAPAWVYENTFKNATSAKVADNGYGVVDAYGGIPFPIPKTGIEVMLNARLAW EEECCCCCCCCHHEEHHHHCCCCCCEECCCCCEEEECCCCCCCCCCCCCEEEEEECHHHH EGVAQKYQLNTWVVTGDGHRTLSSAGLMSWLWPYYYKDARDSYLAKPTHYKMGSFVKSDP HHHHHEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCC SAVAGEVILLHETVNEEKVPRGVWQYLVGQRRVRKAPSIAYDTPDTVTSGTGLFDESFGT CHHHCCEEEEEECCCCHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC MGPIDRHEYKIVGKQEMYIPYNSNKTALAKVDELVTPKFLNPDHVRWELHRVWVVEATLL CCCCCCCCEEEECCEEEEEEECCCCHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEEEEEC PGKRHVMTKRRYYIDEDGWKMVMADHWDAQGQLYHLQYTLPYLAPDIPAVVSTVQWGIIN CCCHHHHCCCCEEECCCCCEEEEEECCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHE LLTGQYYYNCNFNDLPQHFPVPEVPKQLNEAMLSPEAIATGAR EEECCEEEECCCCCCCCCCCCCHHHHHHHHHHCCCHHHHCCCC >Mature Secondary Structure METGMNKTPKISFAVALALASLAAQPVLAAVSAEEAAKLKTTLTPLGAEKAGNADGSIPA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCCC WDGGYTKVAPGWKNGQPRPDPFAAEKPVASISAKNAAQYDARLSEGVKTLMKKYPDFRID CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEE VYPTHRSAAAPAWVYENTFKNATSAKVADNGYGVVDAYGGIPFPIPKTGIEVMLNARLAW EEECCCCCCCCHHEEHHHHCCCCCCEECCCCCEEEECCCCCCCCCCCCCEEEEEECHHHH EGVAQKYQLNTWVVTGDGHRTLSSAGLMSWLWPYYYKDARDSYLAKPTHYKMGSFVKSDP HHHHHEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCC SAVAGEVILLHETVNEEKVPRGVWQYLVGQRRVRKAPSIAYDTPDTVTSGTGLFDESFGT CHHHCCEEEEEECCCCHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC MGPIDRHEYKIVGKQEMYIPYNSNKTALAKVDELVTPKFLNPDHVRWELHRVWVVEATLL CCCCCCCCEEEECCEEEEEEECCCCHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEEEEEC PGKRHVMTKRRYYIDEDGWKMVMADHWDAQGQLYHLQYTLPYLAPDIPAVVSTVQWGIIN CCCHHHHCCCCEEECCCCCEEEEEECCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHE LLTGQYYYNCNFNDLPQHFPVPEVPKQLNEAMLSPEAIATGAR EEECCEEEECCCCCCCCCCCCCHHHHHHHHHHCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]