Definition Methylibium petroleiphilum PM1 chromosome, complete genome.
Accession NC_008825
Length 4,044,195

Click here to switch to the map view.

The map label for this gene is 124266158

Identifier: 124266158

GI number: 124266158

Start: 1025627

End: 1027018

Strand: Direct

Name: 124266158

Synonym: Mpe_A0965

Alternate gene names: NA

Gene position: 1025627-1027018 (Clockwise)

Preceding gene: 124266157

Following gene: 124266159

Centisome position: 25.36

GC content: 66.45

Gene sequence:

>1392_bases
ATGGAGACCGGCATGAACAAGACCCCCAAGATTTCGTTCGCCGTCGCGCTCGCGCTGGCATCCCTCGCCGCGCAGCCGGT
GCTCGCTGCGGTGAGCGCCGAAGAAGCCGCCAAGCTCAAGACCACGCTCACGCCGCTGGGCGCCGAGAAGGCCGGCAACG
CCGACGGCTCGATCCCGGCCTGGGACGGCGGCTACACCAAGGTCGCGCCGGGCTGGAAGAACGGCCAGCCGAGACCCGAT
CCGTTCGCGGCGGAGAAGCCGGTGGCGTCGATCTCGGCCAAGAACGCCGCGCAGTACGACGCCCGGCTGAGCGAGGGCGT
CAAGACGCTGATGAAGAAGTACCCCGACTTCCGCATCGACGTGTACCCGACGCACCGCAGCGCGGCCGCGCCGGCCTGGG
TGTACGAGAACACCTTCAAGAACGCGACCTCCGCGAAGGTGGCCGACAACGGCTACGGCGTGGTCGACGCCTACGGCGGC
ATCCCGTTCCCGATTCCCAAGACCGGCATCGAGGTGATGCTCAACGCGCGGCTGGCCTGGGAGGGCGTGGCACAGAAGTA
CCAGCTCAACACCTGGGTGGTCACCGGCGACGGGCACCGCACGCTGTCGTCGGCCGGGCTGATGTCGTGGTTGTGGCCGT
ACTACTACAAGGATGCGCGCGACAGCTACCTGGCCAAGCCGACCCATTACAAGATGGGGTCCTTCGTCAAGTCGGATCCG
TCGGCGGTGGCCGGTGAAGTGATCCTGCTGCACGAGACCGTGAACGAGGAGAAGGTGCCGCGTGGCGTGTGGCAGTACCT
GGTGGGCCAGCGCCGCGTGCGCAAGGCACCCTCGATCGCCTACGACACGCCGGACACCGTGACCTCGGGCACCGGGCTGT
TCGACGAGTCCTTCGGCACCATGGGCCCGATCGACCGTCACGAGTACAAGATCGTCGGCAAGCAGGAGATGTACATCCCG
TACAACTCCAACAAGACGGCGCTGGCCAAGGTCGACGAGCTGGTGACGCCGAAGTTCCTCAACCCCGACCACGTGCGCTG
GGAGCTGCACCGCGTTTGGGTCGTCGAGGCGACGCTGCTGCCCGGCAAGCGCCACGTGATGACCAAGCGCCGCTACTACA
TCGACGAGGACGGCTGGAAGATGGTCATGGCCGACCACTGGGACGCGCAGGGCCAGCTCTACCACCTGCAGTACACGCTG
CCCTACCTGGCGCCCGACATCCCCGCCGTCGTGAGCACGGTGCAGTGGGGAATCATCAACCTGCTGACGGGCCAGTACTA
CTACAACTGCAACTTCAACGACCTGCCGCAGCACTTCCCCGTGCCCGAAGTGCCGAAGCAGCTCAACGAAGCCATGTTGA
GCCCCGAGGCCATCGCCACCGGGGCGCGCTGA

Upstream 100 bases:

>100_bases
CCTTCCTCACGCCGGCCAACTCGCCCACGCCGGTGCTCTCCTACAAGCAGTTCTACAAGGACCGCAACTTCATTTCCTTC
TCGCTGCAGCGTGCCCTTTG

Downstream 100 bases:

>100_bases
AGTCTCCTCGCTTCGGCCCGGCAGACACAGGAACCCTCGGGGTCCGACCGGGCCGCTTTTTTCTCCACTTCGACGCTCCA
TGTCCAGGGAACTGCCGATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 463; Mature: 463

Protein sequence:

>463_residues
METGMNKTPKISFAVALALASLAAQPVLAAVSAEEAAKLKTTLTPLGAEKAGNADGSIPAWDGGYTKVAPGWKNGQPRPD
PFAAEKPVASISAKNAAQYDARLSEGVKTLMKKYPDFRIDVYPTHRSAAAPAWVYENTFKNATSAKVADNGYGVVDAYGG
IPFPIPKTGIEVMLNARLAWEGVAQKYQLNTWVVTGDGHRTLSSAGLMSWLWPYYYKDARDSYLAKPTHYKMGSFVKSDP
SAVAGEVILLHETVNEEKVPRGVWQYLVGQRRVRKAPSIAYDTPDTVTSGTGLFDESFGTMGPIDRHEYKIVGKQEMYIP
YNSNKTALAKVDELVTPKFLNPDHVRWELHRVWVVEATLLPGKRHVMTKRRYYIDEDGWKMVMADHWDAQGQLYHLQYTL
PYLAPDIPAVVSTVQWGIINLLTGQYYYNCNFNDLPQHFPVPEVPKQLNEAMLSPEAIATGAR

Sequences:

>Translated_463_residues
METGMNKTPKISFAVALALASLAAQPVLAAVSAEEAAKLKTTLTPLGAEKAGNADGSIPAWDGGYTKVAPGWKNGQPRPD
PFAAEKPVASISAKNAAQYDARLSEGVKTLMKKYPDFRIDVYPTHRSAAAPAWVYENTFKNATSAKVADNGYGVVDAYGG
IPFPIPKTGIEVMLNARLAWEGVAQKYQLNTWVVTGDGHRTLSSAGLMSWLWPYYYKDARDSYLAKPTHYKMGSFVKSDP
SAVAGEVILLHETVNEEKVPRGVWQYLVGQRRVRKAPSIAYDTPDTVTSGTGLFDESFGTMGPIDRHEYKIVGKQEMYIP
YNSNKTALAKVDELVTPKFLNPDHVRWELHRVWVVEATLLPGKRHVMTKRRYYIDEDGWKMVMADHWDAQGQLYHLQYTL
PYLAPDIPAVVSTVQWGIINLLTGQYYYNCNFNDLPQHFPVPEVPKQLNEAMLSPEAIATGAR
>Mature_463_residues
METGMNKTPKISFAVALALASLAAQPVLAAVSAEEAAKLKTTLTPLGAEKAGNADGSIPAWDGGYTKVAPGWKNGQPRPD
PFAAEKPVASISAKNAAQYDARLSEGVKTLMKKYPDFRIDVYPTHRSAAAPAWVYENTFKNATSAKVADNGYGVVDAYGG
IPFPIPKTGIEVMLNARLAWEGVAQKYQLNTWVVTGDGHRTLSSAGLMSWLWPYYYKDARDSYLAKPTHYKMGSFVKSDP
SAVAGEVILLHETVNEEKVPRGVWQYLVGQRRVRKAPSIAYDTPDTVTSGTGLFDESFGTMGPIDRHEYKIVGKQEMYIP
YNSNKTALAKVDELVTPKFLNPDHVRWELHRVWVVEATLLPGKRHVMTKRRYYIDEDGWKMVMADHWDAQGQLYHLQYTL
PYLAPDIPAVVSTVQWGIINLLTGQYYYNCNFNDLPQHFPVPEVPKQLNEAMLSPEAIATGAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010752 [H]

Pfam domain/function: PF07044 DUF1329 [H]

EC number: NA

Molecular weight: Translated: 51359; Mature: 51359

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METGMNKTPKISFAVALALASLAAQPVLAAVSAEEAAKLKTTLTPLGAEKAGNADGSIPA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCCC
WDGGYTKVAPGWKNGQPRPDPFAAEKPVASISAKNAAQYDARLSEGVKTLMKKYPDFRID
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEE
VYPTHRSAAAPAWVYENTFKNATSAKVADNGYGVVDAYGGIPFPIPKTGIEVMLNARLAW
EEECCCCCCCCHHEEHHHHCCCCCCEECCCCCEEEECCCCCCCCCCCCCEEEEEECHHHH
EGVAQKYQLNTWVVTGDGHRTLSSAGLMSWLWPYYYKDARDSYLAKPTHYKMGSFVKSDP
HHHHHEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCC
SAVAGEVILLHETVNEEKVPRGVWQYLVGQRRVRKAPSIAYDTPDTVTSGTGLFDESFGT
CHHHCCEEEEEECCCCHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
MGPIDRHEYKIVGKQEMYIPYNSNKTALAKVDELVTPKFLNPDHVRWELHRVWVVEATLL
CCCCCCCCEEEECCEEEEEEECCCCHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEEEEEC
PGKRHVMTKRRYYIDEDGWKMVMADHWDAQGQLYHLQYTLPYLAPDIPAVVSTVQWGIIN
CCCHHHHCCCCEEECCCCCEEEEEECCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHE
LLTGQYYYNCNFNDLPQHFPVPEVPKQLNEAMLSPEAIATGAR
EEECCEEEECCCCCCCCCCCCCHHHHHHHHHHCCCHHHHCCCC
>Mature Secondary Structure
METGMNKTPKISFAVALALASLAAQPVLAAVSAEEAAKLKTTLTPLGAEKAGNADGSIPA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCCC
WDGGYTKVAPGWKNGQPRPDPFAAEKPVASISAKNAAQYDARLSEGVKTLMKKYPDFRID
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEE
VYPTHRSAAAPAWVYENTFKNATSAKVADNGYGVVDAYGGIPFPIPKTGIEVMLNARLAW
EEECCCCCCCCHHEEHHHHCCCCCCEECCCCCEEEECCCCCCCCCCCCCEEEEEECHHHH
EGVAQKYQLNTWVVTGDGHRTLSSAGLMSWLWPYYYKDARDSYLAKPTHYKMGSFVKSDP
HHHHHEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCC
SAVAGEVILLHETVNEEKVPRGVWQYLVGQRRVRKAPSIAYDTPDTVTSGTGLFDESFGT
CHHHCCEEEEEECCCCHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
MGPIDRHEYKIVGKQEMYIPYNSNKTALAKVDELVTPKFLNPDHVRWELHRVWVVEATLL
CCCCCCCCEEEECCEEEEEEECCCCHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEEEEEC
PGKRHVMTKRRYYIDEDGWKMVMADHWDAQGQLYHLQYTLPYLAPDIPAVVSTVQWGIIN
CCCHHHHCCCCEEECCCCCEEEEEECCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHE
LLTGQYYYNCNFNDLPQHFPVPEVPKQLNEAMLSPEAIATGAR
EEECCEEEECCCCCCCCCCCCCHHHHHHHHHHCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]