| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is adh [H]
Identifier: 124266129
GI number: 124266129
Start: 990481
End: 991524
Strand: Direct
Name: adh [H]
Synonym: Mpe_A0936
Alternate gene names: 124266129
Gene position: 990481-991524 (Clockwise)
Preceding gene: 124266128
Following gene: 124266140
Centisome position: 24.49
GC content: 70.11
Gene sequence:
>1044_bases ATGAAGGCCGCCGTGCTGCACCAGTACAACGAGTCGCTGAGCGGCGACAGCTTCGTGCGCTACGGCGACGTGCCCGACCC GAAGATCGAGAGCCCGACCGACGTCATCGTGCGCATCGGCGGTGCCGGCGTGTGCCGCACCGACCTGCACGTGGTCGAGG GCCTGTGGCGCGGCAAGGTCGACGTCGAACTGCCCTACATCATGGGCCACGAGAACGCCGGCTGGATCGAGGCCGTGGGT TCGGCGGTGAGCGGCATGAAGGTCGGCGACCCGGTGATCTGCCATCCGCTCGTGACCAGCGGCCACTGCCTGGCCTGCCG CCGCGGCGACGACATGCACGCCGACGGCAGCCGCTTCCCCGGCATCAATGCCGACGGCGGCTATGCCGAGTACCTGCGCA CGAACCAGCGCTCGCTGATCAAGCTGCCGTCGACGCTGGCGCCCAAGGATGTCGCGCCCTACACCGACGCCGGGCTCACC GCCTACCGCGCCGCCAAGAAGGCCTCGCGCCACCTGCTGCCTGGCGAGTACGCGGTCGTCATCGGCGCCGGCGGGCTGGG GCACATCGGCATCCAGGTGCTGGCGGCACTGTGCGCCGCCGAGATCATCGTCGTCGACCGCGCCGACGCCGCGCTGCAGC TGGCCAAATCCTGCGGGGCCCACCATCTGGTGAAGGCGGACGAGCAGGCGTTGGAGCGCGTGCTCGAGCTCACCGAGGGG AAGGGCGCCCAGGCGGTCATCGATTTCGTCGGCGAGGGCGAGGCCATCTCCAGGGGCCTGGCGATGACGCGCAACGCCGG CACCTACTACGTCGTCGGCTACGGCGGACGGATCGAGCTGCCGTCGATCGACATGATCACCAGCGAGAAGAGCATCGTCG GCAACCTGGTCGGCACGTATGCGGAGCTGGTCGAGCTGATGGCGCTGGCCGACCGCGGGCGGGTGCACCTGGCGACGCGC GAGTACGCGCTGAAGGACGCCAACCAGGCGCTGCTCGACCTGCACCACGGCAGGATCCAGGGGCGCGCCGTGCTCGTGCC CTGA
Upstream 100 bases:
>100_bases CGCGACGAACGATGCCACACACATCCGGCAGAAGCTCGAAGACGGTCGACGCGAGTTGATCGCGCGCTGATCACCCCCCG ACAGGACACCAGGAGACGCC
Downstream 100 bases:
>100_bases ACGACGGCCCGCGGCCGCGGGCCGCGTCGGCGTCAGCAGGGGCGTCGGCGCGCGTACACGCGCGGCACGGCGAAGTCGCG GCCCACCAGCGCGCGCGCAT
Product: putative alcohol dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 347; Mature: 347
Protein sequence:
>347_residues MKAAVLHQYNESLSGDSFVRYGDVPDPKIESPTDVIVRIGGAGVCRTDLHVVEGLWRGKVDVELPYIMGHENAGWIEAVG SAVSGMKVGDPVICHPLVTSGHCLACRRGDDMHADGSRFPGINADGGYAEYLRTNQRSLIKLPSTLAPKDVAPYTDAGLT AYRAAKKASRHLLPGEYAVVIGAGGLGHIGIQVLAALCAAEIIVVDRADAALQLAKSCGAHHLVKADEQALERVLELTEG KGAQAVIDFVGEGEAISRGLAMTRNAGTYYVVGYGGRIELPSIDMITSEKSIVGNLVGTYAELVELMALADRGRVHLATR EYALKDANQALLDLHHGRIQGRAVLVP
Sequences:
>Translated_347_residues MKAAVLHQYNESLSGDSFVRYGDVPDPKIESPTDVIVRIGGAGVCRTDLHVVEGLWRGKVDVELPYIMGHENAGWIEAVG SAVSGMKVGDPVICHPLVTSGHCLACRRGDDMHADGSRFPGINADGGYAEYLRTNQRSLIKLPSTLAPKDVAPYTDAGLT AYRAAKKASRHLLPGEYAVVIGAGGLGHIGIQVLAALCAAEIIVVDRADAALQLAKSCGAHHLVKADEQALERVLELTEG KGAQAVIDFVGEGEAISRGLAMTRNAGTYYVVGYGGRIELPSIDMITSEKSIVGNLVGTYAELVELMALADRGRVHLATR EYALKDANQALLDLHHGRIQGRAVLVP >Mature_347_residues MKAAVLHQYNESLSGDSFVRYGDVPDPKIESPTDVIVRIGGAGVCRTDLHVVEGLWRGKVDVELPYIMGHENAGWIEAVG SAVSGMKVGDPVICHPLVTSGHCLACRRGDDMHADGSRFPGINADGGYAEYLRTNQRSLIKLPSTLAPKDVAPYTDAGLT AYRAAKKASRHLLPGEYAVVIGAGGLGHIGIQVLAALCAAEIIVVDRADAALQLAKSCGAHHLVKADEQALERVLELTEG KGAQAVIDFVGEGEAISRGLAMTRNAGTYYVVGYGGRIELPSIDMITSEKSIVGNLVGTYAELVELMALADRGRVHLATR EYALKDANQALLDLHHGRIQGRAVLVP
Specific function: Converts Galactitol 1-Phosphate To Tagatose 6-Phosphate. [C]
COG id: COG1064
COG function: function code R; Zn-dependent alcohol dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI156627571, Length=330, Percent_Identity=25.7575757575758, Blast_Score=92, Evalue=6e-19, Organism=Homo sapiens, GI262073058, Length=309, Percent_Identity=29.126213592233, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI71743840, Length=309, Percent_Identity=29.126213592233, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI4501933, Length=302, Percent_Identity=28.1456953642384, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI4501929, Length=297, Percent_Identity=27.2727272727273, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI34577061, Length=304, Percent_Identity=27.6315789473684, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI4501939, Length=324, Percent_Identity=25, Blast_Score=69, Evalue=8e-12, Organism=Homo sapiens, GI156523966, Length=324, Percent_Identity=25, Blast_Score=69, Evalue=8e-12, Organism=Escherichia coli, GI1788407, Length=245, Percent_Identity=29.3877551020408, Blast_Score=101, Evalue=9e-23, Organism=Escherichia coli, GI87081918, Length=316, Percent_Identity=29.1139240506329, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI87082401, Length=328, Percent_Identity=29.2682926829268, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI87082125, Length=297, Percent_Identity=29.6296296296296, Blast_Score=93, Evalue=3e-20, Organism=Escherichia coli, GI1788075, Length=318, Percent_Identity=30.188679245283, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI1790045, Length=348, Percent_Identity=26.4367816091954, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI1786825, Length=363, Percent_Identity=28.099173553719, Blast_Score=88, Evalue=9e-19, Organism=Escherichia coli, GI1787863, Length=262, Percent_Identity=27.4809160305344, Blast_Score=88, Evalue=1e-18, Organism=Escherichia coli, GI226510992, Length=288, Percent_Identity=24.6527777777778, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI1788073, Length=320, Percent_Identity=26.875, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1790718, Length=306, Percent_Identity=26.4705882352941, Blast_Score=85, Evalue=7e-18, Organism=Escherichia coli, GI1786518, Length=297, Percent_Identity=28.6195286195286, Blast_Score=69, Evalue=4e-13, Organism=Caenorhabditis elegans, GI71988145, Length=343, Percent_Identity=26.530612244898, Blast_Score=102, Evalue=2e-22, Organism=Caenorhabditis elegans, GI17562584, Length=343, Percent_Identity=27.4052478134111, Blast_Score=101, Evalue=7e-22, Organism=Caenorhabditis elegans, GI17562876, Length=330, Percent_Identity=26.3636363636364, Blast_Score=100, Evalue=8e-22, Organism=Caenorhabditis elegans, GI17562582, Length=351, Percent_Identity=26.4957264957265, Blast_Score=92, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17562878, Length=316, Percent_Identity=24.3670886075949, Blast_Score=91, Evalue=7e-19, Organism=Saccharomyces cerevisiae, GI6319621, Length=340, Percent_Identity=29.4117647058824, Blast_Score=121, Evalue=2e-28, Organism=Saccharomyces cerevisiae, GI6323961, Length=353, Percent_Identity=28.0453257790368, Blast_Score=116, Evalue=6e-27, Organism=Saccharomyces cerevisiae, GI6324486, Length=335, Percent_Identity=28.6567164179104, Blast_Score=115, Evalue=7e-27, Organism=Saccharomyces cerevisiae, GI6323729, Length=335, Percent_Identity=27.4626865671642, Blast_Score=108, Evalue=8e-25, Organism=Saccharomyces cerevisiae, GI6323099, Length=327, Percent_Identity=26.9113149847095, Blast_Score=104, Evalue=2e-23, Organism=Saccharomyces cerevisiae, GI6319955, Length=328, Percent_Identity=27.1341463414634, Blast_Score=95, Evalue=2e-20, Organism=Saccharomyces cerevisiae, GI6322619, Length=328, Percent_Identity=27.1341463414634, Blast_Score=94, Evalue=2e-20, Organism=Saccharomyces cerevisiae, GI6319258, Length=315, Percent_Identity=27.3015873015873, Blast_Score=92, Evalue=1e-19, Organism=Saccharomyces cerevisiae, GI6319257, Length=337, Percent_Identity=24.3323442136499, Blast_Score=77, Evalue=3e-15, Organism=Saccharomyces cerevisiae, GI6323980, Length=344, Percent_Identity=25.2906976744186, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI17137530, Length=327, Percent_Identity=26.9113149847095, Blast_Score=89, Evalue=6e-18, Organism=Drosophila melanogaster, GI17737897, Length=327, Percent_Identity=26.9113149847095, Blast_Score=84, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR002328 - InterPro: IPR011032 - InterPro: IPR016040 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.1.1.1 [H]
Molecular weight: Translated: 36847; Mature: 36847
Theoretical pI: Translated: 6.45; Mature: 6.45
Prosite motif: PS00059 ADH_ZINC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAAVLHQYNESLSGDSFVRYGDVPDPKIESPTDVIVRIGGAGVCRTDLHVVEGLWRGKV CCCHHHHHHHCCCCCCCEEEECCCCCCCCCCCCEEEEEECCCCEEHHHHHHHHHHHCCCE DVELPYIMGHENAGWIEAVGSAVSGMKVGDPVICHPLVTSGHCLACRRGDDMHADGSRFP EEEECEEECCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCC GINADGGYAEYLRTNQRSLIKLPSTLAPKDVAPYTDAGLTAYRAAKKASRHLLPGEYAVV CCCCCCCHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEE IGAGGLGHIGIQVLAALCAAEIIVVDRADAALQLAKSCGAHHLVKADEQALERVLELTEG EECCCCHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHCC KGAQAVIDFVGEGEAISRGLAMTRNAGTYYVVGYGGRIELPSIDMITSEKSIVGNLVGTY CCCEEEHEECCCCHHHHHCHHEEECCCEEEEEEECCEEECCCCEEECCCHHHHHHHHHHH AELVELMALADRGRVHLATREYALKDANQALLDLHHGRIQGRAVLVP HHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCEEECC >Mature Secondary Structure MKAAVLHQYNESLSGDSFVRYGDVPDPKIESPTDVIVRIGGAGVCRTDLHVVEGLWRGKV CCCHHHHHHHCCCCCCCEEEECCCCCCCCCCCCEEEEEECCCCEEHHHHHHHHHHHCCCE DVELPYIMGHENAGWIEAVGSAVSGMKVGDPVICHPLVTSGHCLACRRGDDMHADGSRFP EEEECEEECCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCC GINADGGYAEYLRTNQRSLIKLPSTLAPKDVAPYTDAGLTAYRAAKKASRHLLPGEYAVV CCCCCCCHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEE IGAGGLGHIGIQVLAALCAAEIIVVDRADAALQLAKSCGAHHLVKADEQALERVLELTEG EECCCCHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHCC KGAQAVIDFVGEGEAISRGLAMTRNAGTYYVVGYGGRIELPSIDMITSEKSIVGNLVGTY CCCEEEHEECCCCHHHHHCHHEEECCCEEEEEEECCEEECCCCEEECCCHHHHHHHHHHH AELVELMALADRGRVHLATREYALKDANQALLDLHHGRIQGRAVLVP HHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11572479 [H]