Definition Methylibium petroleiphilum PM1 chromosome, complete genome.
Accession NC_008825
Length 4,044,195

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The map label for this gene is mcp [C]

Identifier: 124266128

GI number: 124266128

Start: 989227

End: 990450

Strand: Direct

Name: mcp [C]

Synonym: Mpe_A0935

Alternate gene names: 124266128

Gene position: 989227-990450 (Clockwise)

Preceding gene: 124266127

Following gene: 124266129

Centisome position: 24.46

GC content: 69.28

Gene sequence:

>1224_bases
ATGGCGATGAGGGTGTCCTTCTTCCGCGCGCGCCGGGACGCACCGCAGGAACCTGACGAGAAGGGCGCCGAGGTGGCACG
GTTGCACTGGCAGGTCGCGGCATTGCAGGCCGAGATCCAAGGCCTGCAGATGCGCTTCGACCTGATCCGCCGTGCGTCGG
GAGAAGGTCTGTGGGACATGGAAGTGCCCGCCGACGATGCGGCCGGCGCGGGCAACCCGTTCTGCTGGTCGGCGCAGTTC
CGCAGGCTGCTCGGCTACCAGGACGAACGCGACTTTCCCGACGTGCTGTCCAGCTGGTCCGACCTGCTGCACCCGGAGGA
CAAGCAGCGCACGCTGCAGGCCTTCGCCGCCCACATGCAGGACCGTTCCGGTCGCACGCCGTACGACGTGACCTACCGCC
TGCGCTGCAAGGATGGCGTGTGCCGCTGGTTCCGTGCGCGGGGCGAGACGCTGCGCGCGGCCGACGGCACCCCCTTGCGC
GTGGCGGGCACCCTCATTCCAATCGACGAGGACCTGAAGCTCCAGCAGGCGCTCGACGTGACGCACACGCGCTTCGAGCT
GTCGCGCGAGATCGTCAACGACGGCGTCTGGGACCTGGCCGTGGTCGCCGGCGATCCGGTGAATCCCCGCAACGCGTTCT
GGTGGTCGCCGCAGTTCCGCCGCCTGCTGGGCTTCGCCGACGAAGCCGAGTTCCCGAACGTGCTCGACAGCTGGGCGTCA
CGCCTGCACCCGGAGGACAAGGACCGCACGATGACGGCCTTCGTGCAGCACCTGACCGACAAGACCGGCCGCACCCCCTA
CGACGTCTGCTACCGGCTGCGGTGCAAGGACGACCGCTATCGCTGGTTCCGCGCCCGTGGCCAGACCCAGCGGGCCGCCG
ACGGCACCGCGCTGCGGGCCGTCGGGGCCCTGGCCGACATCCAGGCCGAAAGGGACCGGGAGGAGGCCGAGCGGCAGCGT
GTCAGGTACAACGCGCAGCTCGAATCCAGCCTGAAGGACATCGGCGACATCGTCGGCACGATCCAGCGCATCGCCCAGCA
GACCAATCTGATCGCGATCAACGCCGCGGTGGAGGCCGCGCGAGCCGGCGAAGCGGGCCGTGGCTTCTCCGTCATCGCCA
GCGAGATCCGCGCGCTGTCCAAGCGCACCAGCGACGCGACGAACGATGCCACACACATCCGGCAGAAGCTCGAAGACGGT
CGACGCGAGTTGATCGCGCGCTGA

Upstream 100 bases:

>100_bases
GCGGCGCGGCGCCGGGCCGCGGTCGGCCATGCGATGGACGACGTGGCGGTGTTCGCTGCGTTGAGGGCCTGGAAGGACCG
CTTCGCATGAGGCCTCGACC

Downstream 100 bases:

>100_bases
TCACCCCCCGACAGGACACCAGGAGACGCCATGAAGGCCGCCGTGCTGCACCAGTACAACGAGTCGCTGAGCGGCGACAG
CTTCGTGCGCTACGGCGACG

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: ORFE [H]

Number of amino acids: Translated: 407; Mature: 406

Protein sequence:

>407_residues
MAMRVSFFRARRDAPQEPDEKGAEVARLHWQVAALQAEIQGLQMRFDLIRRASGEGLWDMEVPADDAAGAGNPFCWSAQF
RRLLGYQDERDFPDVLSSWSDLLHPEDKQRTLQAFAAHMQDRSGRTPYDVTYRLRCKDGVCRWFRARGETLRAADGTPLR
VAGTLIPIDEDLKLQQALDVTHTRFELSREIVNDGVWDLAVVAGDPVNPRNAFWWSPQFRRLLGFADEAEFPNVLDSWAS
RLHPEDKDRTMTAFVQHLTDKTGRTPYDVCYRLRCKDDRYRWFRARGQTQRAADGTALRAVGALADIQAERDREEAERQR
VRYNAQLESSLKDIGDIVGTIQRIAQQTNLIAINAAVEAARAGEAGRGFSVIASEIRALSKRTSDATNDATHIRQKLEDG
RRELIAR

Sequences:

>Translated_407_residues
MAMRVSFFRARRDAPQEPDEKGAEVARLHWQVAALQAEIQGLQMRFDLIRRASGEGLWDMEVPADDAAGAGNPFCWSAQF
RRLLGYQDERDFPDVLSSWSDLLHPEDKQRTLQAFAAHMQDRSGRTPYDVTYRLRCKDGVCRWFRARGETLRAADGTPLR
VAGTLIPIDEDLKLQQALDVTHTRFELSREIVNDGVWDLAVVAGDPVNPRNAFWWSPQFRRLLGFADEAEFPNVLDSWAS
RLHPEDKDRTMTAFVQHLTDKTGRTPYDVCYRLRCKDDRYRWFRARGQTQRAADGTALRAVGALADIQAERDREEAERQR
VRYNAQLESSLKDIGDIVGTIQRIAQQTNLIAINAAVEAARAGEAGRGFSVIASEIRALSKRTSDATNDATHIRQKLEDG
RRELIAR
>Mature_406_residues
AMRVSFFRARRDAPQEPDEKGAEVARLHWQVAALQAEIQGLQMRFDLIRRASGEGLWDMEVPADDAAGAGNPFCWSAQFR
RLLGYQDERDFPDVLSSWSDLLHPEDKQRTLQAFAAHMQDRSGRTPYDVTYRLRCKDGVCRWFRARGETLRAADGTPLRV
AGTLIPIDEDLKLQQALDVTHTRFELSREIVNDGVWDLAVVAGDPVNPRNAFWWSPQFRRLLGFADEAEFPNVLDSWASR
LHPEDKDRTMTAFVQHLTDKTGRTPYDVCYRLRCKDDRYRWFRARGQTQRAADGTALRAVGALADIQAERDREEAERQRV
RYNAQLESSLKDIGDIVGTIQRIAQQTNLIAINAAVEAARAGEAGRGFSVIASEIRALSKRTSDATNDATHIRQKLEDGR
RELIAR

Specific function: Mediates Taxis To The Sugars Ribose And Galactose VIa An Interaction With The Periplasmic Ribose- Or Galactose-Binding Proteins. Chemotactic-Signal Transducers Respond To Changes In The Concentration Of Attractants And Repellents In The Environment, Trans

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787690, Length=69, Percent_Identity=50.7246376811594, Blast_Score=73, Evalue=4e-14,
Organism=Escherichia coli, GI1788195, Length=80, Percent_Identity=48.75, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI1788194, Length=64, Percent_Identity=53.125, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI2367378, Length=73, Percent_Identity=50.6849315068493, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1789453, Length=144, Percent_Identity=33.3333333333333, Blast_Score=71, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001610
- InterPro:   IPR013655 [H]

Pfam domain/function: PF08447 PAS_3 [H]

EC number: NA

Molecular weight: Translated: 46268; Mature: 46137

Theoretical pI: Translated: 7.17; Mature: 7.17

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMRVSFFRARRDAPQEPDEKGAEVARLHWQVAALQAEIQGLQMRFDLIRRASGEGLWDM
CCEEHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEC
EVPADDAAGAGNPFCWSAQFRRLLGYQDERDFPDVLSSWSDLLHPEDKQRTLQAFAAHMQ
CCCCCCCCCCCCCCEEHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHH
DRSGRTPYDVTYRLRCKDGVCRWFRARGETLRAADGTPLRVAGTLIPIDEDLKLQQALDV
HCCCCCCCEEEEEEECCHHHHHHHHHCCCEEECCCCCCEEEEEEEECCCCCHHHHHHHHH
THTRFELSREIVNDGVWDLAVVAGDPVNPRNAFWWSPQFRRLLGFADEAEFPNVLDSWAS
HHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEECHHHHHHHCCCCCCCCCHHHHHHHH
RLHPEDKDRTMTAFVQHLTDKTGRTPYDVCYRLRCKDDRYRWFRARGQTQRAADGTALRA
HCCCCCCHHHHHHHHHHHHHCCCCCHHHHHEEEECCCCHHHHHHHCCCCCHHCCCHHHHH
VGALADIQAERDREEAERQRVRYNAQLESSLKDIGDIVGTIQRIAQQTNLIAINAAVEAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHH
RAGEAGRGFSVIASEIRALSKRTSDATNDATHIRQKLEDGRRELIAR
HCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AMRVSFFRARRDAPQEPDEKGAEVARLHWQVAALQAEIQGLQMRFDLIRRASGEGLWDM
CEEHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEC
EVPADDAAGAGNPFCWSAQFRRLLGYQDERDFPDVLSSWSDLLHPEDKQRTLQAFAAHMQ
CCCCCCCCCCCCCCEEHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHH
DRSGRTPYDVTYRLRCKDGVCRWFRARGETLRAADGTPLRVAGTLIPIDEDLKLQQALDV
HCCCCCCCEEEEEEECCHHHHHHHHHCCCEEECCCCCCEEEEEEEECCCCCHHHHHHHHH
THTRFELSREIVNDGVWDLAVVAGDPVNPRNAFWWSPQFRRLLGFADEAEFPNVLDSWAS
HHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEECHHHHHHHCCCCCCCCCHHHHHHHH
RLHPEDKDRTMTAFVQHLTDKTGRTPYDVCYRLRCKDDRYRWFRARGQTQRAADGTALRA
HCCCCCCHHHHHHHHHHHHHCCCCCHHHHHEEEECCCCHHHHHHHCCCCCHHCCCHHHHH
VGALADIQAERDREEAERQRVRYNAQLESSLKDIGDIVGTIQRIAQQTNLIAINAAVEAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHH
RAGEAGRGFSVIASEIRALSKRTSDATNDATHIRQKLEDGRRELIAR
HCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2013568 [H]