| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
Click here to switch to the map view.
The map label for this gene is lip2 [H]
Identifier: 124266083
GI number: 124266083
Start: 935153
End: 936085
Strand: Direct
Name: lip2 [H]
Synonym: Mpe_A0890
Alternate gene names: 124266083
Gene position: 935153-936085 (Clockwise)
Preceding gene: 124266082
Following gene: 124266084
Centisome position: 23.12
GC content: 67.52
Gene sequence:
>933_bases ATGTCACTGGACCCGCAAGTACAAGGATTGCTCGATGCGTTCAAGGCGCAGGGCCTGAAGAGCTTCGAGCAGATGACGGT GCCCGAATCCCGCGAGACTGCCATGGCCTTCGTCGGCCTGGAAGGCGACGAGGAGGCGGTAGCCGATGTGTCGAATCACC GTGTGCCGGTGAAGGGCGGCGACATCGCCGTGCGCATCTACCGGCCAGCGGGCAACGCACCGCACCCGATGCTGGTTTAC TTCCACGGCGGCGGCTTCGTGTTCGGCAACCTGGATCTGGTCGACAAGGTCGCCCGCTCGCTGTGCAACGCGTCCAATGC GGCGGTGGTCTCGGTCGACTACCGCAAGGCACCCGAGCACCCCTATCCCACGGCGCCGGAGGATGCCTACGCCGGCCTGG TGTGGGCGCGCGAGAACGCCGCGAAGCTGGGGCTCGATCCGGCCCGCATCGCGGTGGCCGGCGACAGCGCCGGTGGCAAC CTCGCGGCGGTCGTGTCGCAGATGGCACGTGACCGCAAGGGCCCGAAGATCGCCCACCAGGTGCTGGTCTACCCGGTCAC CGACGCGGCGGGCGACTACCCCTCGCGCAAGGAAAACGCCGAAGGCTACCTGCTGACCCAGGGTGCGATGAACTGGTTCT TCGGCCATTACCTGACGAGTCCCGGCCTGGCGAGCGACGCCTATGTCTCGCCGATCAAGGGGGATCTCAAGGGCCTGCCC GCCGCCACCGTGATCACCGCCGGCTACGACCCGCTGCGCGACGAGGGCGATGCCTACGCCAAGGCGCTGGCGAAGGCCGG TGTGGCGGTCGACCACGTGCCCAACCCGACGATGATCCACGGCTTCTTCTGGATGAAGGGCGTGATCGGCCACACGCAGA GCATCTACGACCGCGTCGGCAGGAACCTGAAGGCCGCGTTCGGGACCGCCTGA
Upstream 100 bases:
>100_bases CCCAGCGTCTACGACAAGTACCTGACCACTTCCGCGATGCAGCGGCTGGGCAACTGAAGCCCGGTCTCTGCGCTTCTTCA CCACCCCCAAGGAGACGACG
Downstream 100 bases:
>100_bases ATGCCGCCGGTTTCGACGCGCAGCTGAGGAGGGCGGTCATGCCGGCAACGGGCCCGGGCCCCGGTCCGTTGCGCGGCGTG CGCGTGGTCGAGTTCGCTGC
Product: putative lipase
Products: NA
Alternate protein names: Triacylglycerol lipase [H]
Number of amino acids: Translated: 310; Mature: 309
Protein sequence:
>310_residues MSLDPQVQGLLDAFKAQGLKSFEQMTVPESRETAMAFVGLEGDEEAVADVSNHRVPVKGGDIAVRIYRPAGNAPHPMLVY FHGGGFVFGNLDLVDKVARSLCNASNAAVVSVDYRKAPEHPYPTAPEDAYAGLVWARENAAKLGLDPARIAVAGDSAGGN LAAVVSQMARDRKGPKIAHQVLVYPVTDAAGDYPSRKENAEGYLLTQGAMNWFFGHYLTSPGLASDAYVSPIKGDLKGLP AATVITAGYDPLRDEGDAYAKALAKAGVAVDHVPNPTMIHGFFWMKGVIGHTQSIYDRVGRNLKAAFGTA
Sequences:
>Translated_310_residues MSLDPQVQGLLDAFKAQGLKSFEQMTVPESRETAMAFVGLEGDEEAVADVSNHRVPVKGGDIAVRIYRPAGNAPHPMLVY FHGGGFVFGNLDLVDKVARSLCNASNAAVVSVDYRKAPEHPYPTAPEDAYAGLVWARENAAKLGLDPARIAVAGDSAGGN LAAVVSQMARDRKGPKIAHQVLVYPVTDAAGDYPSRKENAEGYLLTQGAMNWFFGHYLTSPGLASDAYVSPIKGDLKGLP AATVITAGYDPLRDEGDAYAKALAKAGVAVDHVPNPTMIHGFFWMKGVIGHTQSIYDRVGRNLKAAFGTA >Mature_309_residues SLDPQVQGLLDAFKAQGLKSFEQMTVPESRETAMAFVGLEGDEEAVADVSNHRVPVKGGDIAVRIYRPAGNAPHPMLVYF HGGGFVFGNLDLVDKVARSLCNASNAAVVSVDYRKAPEHPYPTAPEDAYAGLVWARENAAKLGLDPARIAVAGDSAGGNL AAVVSQMARDRKGPKIAHQVLVYPVTDAAGDYPSRKENAEGYLLTQGAMNWFFGHYLTSPGLASDAYVSPIKGDLKGLPA ATVITAGYDPLRDEGDAYAKALAKAGVAVDHVPNPTMIHGFFWMKGVIGHTQSIYDRVGRNLKAAFGTA
Specific function: Has An Esterase Activity. Triacetyl Glycerol (Triacetin) Is A Substrate Of The Enzyme. [C]
COG id: COG0657
COG function: function code I; Esterase/lipase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 'GDXG' lipolytic enzyme family [H]
Homologues:
Organism=Homo sapiens, GI206597554, Length=354, Percent_Identity=28.5310734463277, Blast_Score=116, Evalue=2e-26, Organism=Homo sapiens, GI68299767, Length=213, Percent_Identity=33.3333333333333, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI157041239, Length=165, Percent_Identity=34.5454545454545, Blast_Score=99, Evalue=7e-21, Organism=Homo sapiens, GI61966717, Length=166, Percent_Identity=31.3253012048193, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI157041237, Length=124, Percent_Identity=34.6774193548387, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI68051721, Length=185, Percent_Identity=29.7297297297297, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI21328446, Length=93, Percent_Identity=40.8602150537634, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI226423947, Length=193, Percent_Identity=28.4974093264249, Blast_Score=68, Evalue=9e-12, Organism=Escherichia coli, GI1786682, Length=234, Percent_Identity=29.0598290598291, Blast_Score=103, Evalue=1e-23, Organism=Caenorhabditis elegans, GI17567059, Length=289, Percent_Identity=30.7958477508651, Blast_Score=125, Evalue=4e-29, Organism=Caenorhabditis elegans, GI71996133, Length=204, Percent_Identity=29.4117647058824, Blast_Score=91, Evalue=5e-19, Organism=Caenorhabditis elegans, GI72001146, Length=130, Percent_Identity=37.6923076923077, Blast_Score=91, Evalue=6e-19, Organism=Caenorhabditis elegans, GI17540028, Length=157, Percent_Identity=31.8471337579618, Blast_Score=91, Evalue=7e-19, Organism=Caenorhabditis elegans, GI115533410, Length=96, Percent_Identity=36.4583333333333, Blast_Score=64, Evalue=8e-11, Organism=Drosophila melanogaster, GI24656084, Length=90, Percent_Identity=38.8888888888889, Blast_Score=65, Evalue=6e-11, Organism=Drosophila melanogaster, GI24656076, Length=90, Percent_Identity=38.8888888888889, Blast_Score=65, Evalue=6e-11, Organism=Drosophila melanogaster, GI20130169, Length=90, Percent_Identity=38.8888888888889, Blast_Score=65, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013094 - InterPro: IPR002168 [H]
Pfam domain/function: PF07859 Abhydrolase_3 [H]
EC number: =3.1.1.3 [H]
Molecular weight: Translated: 32925; Mature: 32793
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: PS01174 LIPASE_GDXG_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLDPQVQGLLDAFKAQGLKSFEQMTVPESRETAMAFVGLEGDEEAVADVSNHRVPVKGG CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHCCEEEECCC DIAVRIYRPAGNAPHPMLVYFHGGGFVFGNLDLVDKVARSLCNASNAAVVSVDYRKAPEH CEEEEEECCCCCCCCCEEEEEECCEEEEECHHHHHHHHHHHHCCCCCEEEEEECCCCCCC PYPTAPEDAYAGLVWARENAAKLGLDPARIAVAGDSAGGNLAAVVSQMARDRKGPKIAHQ CCCCCCCHHHEEEEEECCCCHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEE VLVYPVTDAAGDYPSRKENAEGYLLTQGAMNWFFGHYLTSPGLASDAYVSPIKGDLKGLP EEEEEECCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCC AATVITAGYDPLRDEGDAYAKALAKAGVAVDHVPNPTMIHGFFWMKGVIGHTQSIYDRVG CEEEEECCCCCCCCCHHHHHHHHHHCCCEEECCCCCCEEEHHHHHHHHHCCHHHHHHHHC RNLKAAFGTA CCHHHHCCCC >Mature Secondary Structure SLDPQVQGLLDAFKAQGLKSFEQMTVPESRETAMAFVGLEGDEEAVADVSNHRVPVKGG CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHCCEEEECCC DIAVRIYRPAGNAPHPMLVYFHGGGFVFGNLDLVDKVARSLCNASNAAVVSVDYRKAPEH CEEEEEECCCCCCCCCEEEEEECCEEEEECHHHHHHHHHHHHCCCCCEEEEEECCCCCCC PYPTAPEDAYAGLVWARENAAKLGLDPARIAVAGDSAGGNLAAVVSQMARDRKGPKIAHQ CCCCCCCHHHEEEEEECCCCHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEE VLVYPVTDAAGDYPSRKENAEGYLLTQGAMNWFFGHYLTSPGLASDAYVSPIKGDLKGLP EEEEEECCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCC AATVITAGYDPLRDEGDAYAKALAKAGVAVDHVPNPTMIHGFFWMKGVIGHTQSIYDRVG CEEEEECCCCCCCCCHHHHHHHHHHCCCEEECCCCCCEEEHHHHHHHHHCCHHHHHHHHC RNLKAAFGTA CCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1907455 [H]