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The map label for this gene is yfdE [H]

Identifier: 124266084

GI number: 124266084

Start: 936124

End: 937290

Strand: Direct

Name: yfdE [H]

Synonym: Mpe_A0891

Alternate gene names: 124266084

Gene position: 936124-937290 (Clockwise)

Preceding gene: 124266083

Following gene: 124266086

Centisome position: 23.15

GC content: 73.52

Gene sequence:

>1167_bases
ATGCCGGCAACGGGCCCGGGCCCCGGTCCGTTGCGCGGCGTGCGCGTGGTCGAGTTCGCTGCCATGGGGCCGGCGCCGTT
CTGCGGCATGCTGCTGGCCGACCTGGGCGCCGACGTGCTGCGCATCGACCGGCCCGGCGGCGGCCCGCAGGCGGCGCTGT
TCGATCCCGCCCGCGACGTGCTTCAGCGCGGCCGCAACGCCGTGGCGCTCGACCTCGCGCAGGCCGATGGCCGCGCGGCG
GCCTTGCGCCTGGTCGGCACGGCCGAGGTGCTGATCGAGGGCTTCCGGCCCGGCGTGATGGAGCGTCTGGGTCTGGGCCC
CGAACCCTGCCTGGCGCACAACCCGCGGCTGGTCTACGGCCGTATGACCGGCTGGGGCCAGGACGGCCCGCTCGCACACA
CGGCGGGCCACGACCTGAACTACCTCGCGCTGTCGGGGGCCTTGCACGCCATCGGTCGATCCGAAGGCGGCCCTGTGCCG
CCGCTCAACCTGGTGGCCGACTTCGGTGGCGGCGCCATGCTGCTCGCGGTGGGCGTGCTGGCTGCGGTGCTGCATGCCCG
CCAGACCGGCGAAGGCCAGGTGGTCGACGCCGCGATGACCGATGGCTGCGCGCTGTTGCAGGCGATGAACCTGACCTTCC
AGGCGATGGGGCAATGGGAGGATCGGCGGCAGAGCAACCTGATCGATGGCGCCGCACCCTTCTACGACACCTATGCGTGC
GCCGACGGTGGCTACATGGCGGTGGCTGCGCTCGAGGAACGCTTCTACCGCCAGTTCCTCGACCGCACCGGTCTGGCCGG
CGTGGGGCTCATGCAGAGCCAGCACGACCGCACGCTCTGGCCGCTGCAGAAGCAGCGCATCTCCGAGGTGCTGCGAACTC
GCACGCGCGACGATTGGACACGGGTGTTCGAGGGCAGCGATGCCTGCGTCACGCCGGTGCTCACGCTGGGCGAGGCACCG
CGCCATCCGCACCACCGGGCGCGCGGCAGCTTCGTCACGGTCGATGGCCAGGTGCAGCCCGGCCCGGCGCCGCGCTTCTC
GCGCACGCCCACGGTGGGCGCGCGCTCGCTCCCGGCCACGCACGACGGGGGGCAGGCGCTGGCGGACTGGGGCTGGTCTC
GGGAGGACATTGCGCGGCTCGCGGCCAGCGGCGCGATGGCCGCCTGA

Upstream 100 bases:

>100_bases
ACACGCAGAGCATCTACGACCGCGTCGGCAGGAACCTGAAGGCCGCGTTCGGGACCGCCTGAATGCCGCCGGTTTCGACG
CGCAGCTGAGGAGGGCGGTC

Downstream 100 bases:

>100_bases
GCGCTGACCGGCGCCACTCGCTCAGGACACCAGCCGCAAGGTCCGCGCCGCGTTGATCGCCTGCACGCGACCGCTGACGC
CGAGCTTGGAGTAGATGTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 387

Protein sequence:

>388_residues
MPATGPGPGPLRGVRVVEFAAMGPAPFCGMLLADLGADVLRIDRPGGGPQAALFDPARDVLQRGRNAVALDLAQADGRAA
ALRLVGTAEVLIEGFRPGVMERLGLGPEPCLAHNPRLVYGRMTGWGQDGPLAHTAGHDLNYLALSGALHAIGRSEGGPVP
PLNLVADFGGGAMLLAVGVLAAVLHARQTGEGQVVDAAMTDGCALLQAMNLTFQAMGQWEDRRQSNLIDGAAPFYDTYAC
ADGGYMAVAALEERFYRQFLDRTGLAGVGLMQSQHDRTLWPLQKQRISEVLRTRTRDDWTRVFEGSDACVTPVLTLGEAP
RHPHHRARGSFVTVDGQVQPGPAPRFSRTPTVGARSLPATHDGGQALADWGWSREDIARLAASGAMAA

Sequences:

>Translated_388_residues
MPATGPGPGPLRGVRVVEFAAMGPAPFCGMLLADLGADVLRIDRPGGGPQAALFDPARDVLQRGRNAVALDLAQADGRAA
ALRLVGTAEVLIEGFRPGVMERLGLGPEPCLAHNPRLVYGRMTGWGQDGPLAHTAGHDLNYLALSGALHAIGRSEGGPVP
PLNLVADFGGGAMLLAVGVLAAVLHARQTGEGQVVDAAMTDGCALLQAMNLTFQAMGQWEDRRQSNLIDGAAPFYDTYAC
ADGGYMAVAALEERFYRQFLDRTGLAGVGLMQSQHDRTLWPLQKQRISEVLRTRTRDDWTRVFEGSDACVTPVLTLGEAP
RHPHHRARGSFVTVDGQVQPGPAPRFSRTPTVGARSLPATHDGGQALADWGWSREDIARLAASGAMAA
>Mature_387_residues
PATGPGPGPLRGVRVVEFAAMGPAPFCGMLLADLGADVLRIDRPGGGPQAALFDPARDVLQRGRNAVALDLAQADGRAAA
LRLVGTAEVLIEGFRPGVMERLGLGPEPCLAHNPRLVYGRMTGWGQDGPLAHTAGHDLNYLALSGALHAIGRSEGGPVPP
LNLVADFGGGAMLLAVGVLAAVLHARQTGEGQVVDAAMTDGCALLQAMNLTFQAMGQWEDRRQSNLIDGAAPFYDTYACA
DGGYMAVAALEERFYRQFLDRTGLAGVGLMQSQHDRTLWPLQKQRISEVLRTRTRDDWTRVFEGSDACVTPVLTLGEAPR
HPHHRARGSFVTVDGQVQPGPAPRFSRTPTVGARSLPATHDGGQALADWGWSREDIARLAASGAMAA

Specific function: Unknown

COG id: COG1804

COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CaiB/BaiF CoA-transferase family [H]

Homologues:

Organism=Homo sapiens, GI42794625, Length=381, Percent_Identity=43.5695538057743, Blast_Score=319, Evalue=3e-87,
Organism=Homo sapiens, GI266456254, Length=381, Percent_Identity=43.5695538057743, Blast_Score=318, Evalue=4e-87,
Organism=Homo sapiens, GI266458393, Length=266, Percent_Identity=46.9924812030075, Blast_Score=241, Evalue=7e-64,
Organism=Homo sapiens, GI266458397, Length=251, Percent_Identity=48.207171314741, Blast_Score=239, Evalue=4e-63,
Organism=Homo sapiens, GI266458395, Length=141, Percent_Identity=49.645390070922, Blast_Score=137, Evalue=2e-32,
Organism=Homo sapiens, GI42822893, Length=141, Percent_Identity=49.645390070922, Blast_Score=137, Evalue=2e-32,
Organism=Homo sapiens, GI300863128, Length=371, Percent_Identity=26.6846361185984, Blast_Score=127, Evalue=1e-29,
Organism=Homo sapiens, GI300863124, Length=397, Percent_Identity=25.6926952141058, Blast_Score=123, Evalue=2e-28,
Organism=Homo sapiens, GI300863126, Length=369, Percent_Identity=22.7642276422764, Blast_Score=94, Evalue=1e-19,
Organism=Homo sapiens, GI13376042, Length=395, Percent_Identity=23.5443037974684, Blast_Score=91, Evalue=2e-18,
Organism=Escherichia coli, GI87082093, Length=354, Percent_Identity=28.2485875706215, Blast_Score=131, Evalue=6e-32,
Organism=Escherichia coli, GI1786222, Length=401, Percent_Identity=27.431421446384, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI1788717, Length=210, Percent_Identity=31.9047619047619, Blast_Score=95, Evalue=9e-21,
Organism=Caenorhabditis elegans, GI115535051, Length=333, Percent_Identity=35.1351351351351, Blast_Score=209, Evalue=3e-54,
Organism=Caenorhabditis elegans, GI32564160, Length=343, Percent_Identity=34.1107871720117, Blast_Score=203, Evalue=2e-52,
Organism=Drosophila melanogaster, GI24585488, Length=358, Percent_Identity=42.4581005586592, Blast_Score=288, Evalue=5e-78,
Organism=Drosophila melanogaster, GI24648431, Length=333, Percent_Identity=28.8288288288288, Blast_Score=115, Evalue=6e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003673 [H]

Pfam domain/function: PF02515 CoA_transf_3 [H]

EC number: NA

Molecular weight: Translated: 41012; Mature: 40881

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPATGPGPGPLRGVRVVEFAAMGPAPFCGMLLADLGADVLRIDRPGGGPQAALFDPARDV
CCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHH
LQRGRNAVALDLAQADGRAAALRLVGTAEVLIEGFRPGVMERLGLGPEPCLAHNPRLVYG
HHCCCCEEEEEEECCCCCEEEEEEHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCEEEEE
RMTGWGQDGPLAHTAGHDLNYLALSGALHAIGRSEGGPVPPLNLVADFGGGAMLLAVGVL
ECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHEEECCCCHHHHHHHHH
AAVLHARQTGEGQVVDAAMTDGCALLQAMNLTFQAMGQWEDRRQSNLIDGAAPFYDTYAC
HHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCEEE
ADGGYMAVAALEERFYRQFLDRTGLAGVGLMQSQHDRTLWPLQKQRISEVLRTRTRDDWT
CCCCEEHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHH
RVFEGSDACVTPVLTLGEAPRHPHHRARGSFVTVDGQVQPGPAPRFSRTPTVGARSLPAT
HHHCCCCCHHHHHHHCCCCCCCCCHHCCCCEEEECCEECCCCCCCCCCCCCCCCCCCCCC
HDGGQALADWGWSREDIARLAASGAMAA
CCCCCHHHHCCCCHHHHHHHHHCCCCCC
>Mature Secondary Structure 
PATGPGPGPLRGVRVVEFAAMGPAPFCGMLLADLGADVLRIDRPGGGPQAALFDPARDV
CCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHH
LQRGRNAVALDLAQADGRAAALRLVGTAEVLIEGFRPGVMERLGLGPEPCLAHNPRLVYG
HHCCCCEEEEEEECCCCCEEEEEEHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCEEEEE
RMTGWGQDGPLAHTAGHDLNYLALSGALHAIGRSEGGPVPPLNLVADFGGGAMLLAVGVL
ECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHEEECCCCHHHHHHHHH
AAVLHARQTGEGQVVDAAMTDGCALLQAMNLTFQAMGQWEDRRQSNLIDGAAPFYDTYAC
HHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCEEE
ADGGYMAVAALEERFYRQFLDRTGLAGVGLMQSQHDRTLWPLQKQRISEVLRTRTRDDWT
CCCCEEHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHH
RVFEGSDACVTPVLTLGEAPRHPHHRARGSFVTVDGQVQPGPAPRFSRTPTVGARSLPAT
HHHCCCCCHHHHHHHCCCCCCCCCHHCCCCEEEECCEECCCCCCCCCCCCCCCCCCCCCC
HDGGQALADWGWSREDIARLAASGAMAA
CCCCCHHHHCCCCHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 8125343 [H]