| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
Click here to switch to the map view.
The map label for this gene is 124266082
Identifier: 124266082
GI number: 124266082
Start: 933730
End: 935109
Strand: Direct
Name: 124266082
Synonym: Mpe_A0889
Alternate gene names: NA
Gene position: 933730-935109 (Clockwise)
Preceding gene: 124266081
Following gene: 124266083
Centisome position: 23.09
GC content: 67.61
Gene sequence:
>1380_bases ATGGCGCACCTCCTGCGTTTCGACCGCGACTACAGCCGCCGCGCCTTCCTCGACGCCACCGGCAAGGGACTGCTGCGCGC CGGCGTGTTCGGGTCGGCCTGGGCGGCCTTCCTGCGCACCGGCTCGGTCGCAGCGGCGTATCCGGACGAGTTGCTGTCGA TCGAGGTCTACACGAAGGGGCGGCTCAAGCCCGGTGACGTGATCGACGCGGGCAACGTGGAACTGGTGAAGGACCTGCTC GACCCGGTCCGCTACCGGCAGATCGCCACGATGGGTCGCAAGCTGCTGCTCGCGCCGACCACCACCGACCTGAGCCACCT GAACCCGCTGCCTTACCTGGAGGCCACGGCGCGCAACCGCGGCAAGGCGCGCTTCGATGCCACCGGCAACATCGTCACCA CCGAAGGCAAGCCCTGGATCGGCGGCAATCCGTTTCCGGAGCCCACGTCGGCGCTGGAGATGTTCGCCGCCCACACGCTG AGCTGGGGCCGGCACGACGTGTCGGTCTATGCCAGCAAGGAATACGACCTCGACCCCGCGGGCAATCTGCAGTACCAGTA CTCGTCGGTGTGGGCCGAGATGTCCACGGTAGCGCGCACCGTCATCGATCCCAAGCCCTACTGGGCCGGTGAAGCGGACA AGCTGCGCTACCAGTCGGTGCTGTTCACCGAGCCGGCCGATGCGCGTGGCACCATCTTCCTCAACATCTGGGCCTACGAC CAGAACCAGTTCCCGCAGCTCTACGGCTACCTGCCGGCCTTCAAGCGGGTGCGCAGTTTCCCGACCAATCAGCGCTTCGA GCCGCTGGTGGCCGGCGCCGAGCTCTACCTGTCGGACGCCTGGGCGGCCGGCGATCCGTTCCTGACCTGGGGCAACTATC AGGTCGTGCACCGTGGGCCGCACCTCGCAGCGGTCTCGCGCGGATGGACGTCGACCCATCCGAACTGGGAGCACACCACC CATGGCGGCCCGAAGGGCAACCTGTTCTGGGACCACGCGGTCGAACTGGTGCCCGAGGTGATCGTCATCGAGGCCGAGCC GGTGCGTTACCCGCGCGCGCCGGTCGGGCGCAAGCGCGTGTGGTTCGACGCGCGCACGCTGGTGCCGTTCCAGATGGTGT CCTACGACCGTCGCGGCGAACTGTTCCGCCACTTCGACGCGTCCTTCGCGTACTACGACGACGGCAAGGCGCGCGTGATG GACGGCAAGGAGCCCTACTGGTCCTGGGCCACCGTGCATGCCTTCAACGTGCAGACCAACCGCATGACCCGCATCGAGCA GGTGCGCGAGGTGCCGGGCGGCCACTCGATGCGCGTCAACGACCCCAGCGTCTACGACAAGTACCTGACCACTTCCGCGA TGCAGCGGCTGGGCAACTGA
Upstream 100 bases:
>100_bases CCGGTTTCGACGACGACACGCACCGGCCGCTCGCGCAGCCGGTGCTTTTTTCTTTGTGCCATCGCCTTCGCGCCGGGGCG ATGGCCTGAACAGGTCATTC
Downstream 100 bases:
>100_bases AGCCCGGTCTCTGCGCTTCTTCACCACCCCCAAGGAGACGACGATGTCACTGGACCCGCAAGTACAAGGATTGCTCGATG CGTTCAAGGCGCAGGGCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 459; Mature: 458
Protein sequence:
>459_residues MAHLLRFDRDYSRRAFLDATGKGLLRAGVFGSAWAAFLRTGSVAAAYPDELLSIEVYTKGRLKPGDVIDAGNVELVKDLL DPVRYRQIATMGRKLLLAPTTTDLSHLNPLPYLEATARNRGKARFDATGNIVTTEGKPWIGGNPFPEPTSALEMFAAHTL SWGRHDVSVYASKEYDLDPAGNLQYQYSSVWAEMSTVARTVIDPKPYWAGEADKLRYQSVLFTEPADARGTIFLNIWAYD QNQFPQLYGYLPAFKRVRSFPTNQRFEPLVAGAELYLSDAWAAGDPFLTWGNYQVVHRGPHLAAVSRGWTSTHPNWEHTT HGGPKGNLFWDHAVELVPEVIVIEAEPVRYPRAPVGRKRVWFDARTLVPFQMVSYDRRGELFRHFDASFAYYDDGKARVM DGKEPYWSWATVHAFNVQTNRMTRIEQVREVPGGHSMRVNDPSVYDKYLTTSAMQRLGN
Sequences:
>Translated_459_residues MAHLLRFDRDYSRRAFLDATGKGLLRAGVFGSAWAAFLRTGSVAAAYPDELLSIEVYTKGRLKPGDVIDAGNVELVKDLL DPVRYRQIATMGRKLLLAPTTTDLSHLNPLPYLEATARNRGKARFDATGNIVTTEGKPWIGGNPFPEPTSALEMFAAHTL SWGRHDVSVYASKEYDLDPAGNLQYQYSSVWAEMSTVARTVIDPKPYWAGEADKLRYQSVLFTEPADARGTIFLNIWAYD QNQFPQLYGYLPAFKRVRSFPTNQRFEPLVAGAELYLSDAWAAGDPFLTWGNYQVVHRGPHLAAVSRGWTSTHPNWEHTT HGGPKGNLFWDHAVELVPEVIVIEAEPVRYPRAPVGRKRVWFDARTLVPFQMVSYDRRGELFRHFDASFAYYDDGKARVM DGKEPYWSWATVHAFNVQTNRMTRIEQVREVPGGHSMRVNDPSVYDKYLTTSAMQRLGN >Mature_458_residues AHLLRFDRDYSRRAFLDATGKGLLRAGVFGSAWAAFLRTGSVAAAYPDELLSIEVYTKGRLKPGDVIDAGNVELVKDLLD PVRYRQIATMGRKLLLAPTTTDLSHLNPLPYLEATARNRGKARFDATGNIVTTEGKPWIGGNPFPEPTSALEMFAAHTLS WGRHDVSVYASKEYDLDPAGNLQYQYSSVWAEMSTVARTVIDPKPYWAGEADKLRYQSVLFTEPADARGTIFLNIWAYDQ NQFPQLYGYLPAFKRVRSFPTNQRFEPLVAGAELYLSDAWAAGDPFLTWGNYQVVHRGPHLAAVSRGWTSTHPNWEHTTH GGPKGNLFWDHAVELVPEVIVIEAEPVRYPRAPVGRKRVWFDARTLVPFQMVSYDRRGELFRHFDASFAYYDDGKARVMD GKEPYWSWATVHAFNVQTNRMTRIEQVREVPGGHSMRVNDPSVYDKYLTTSAMQRLGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51917; Mature: 51786
Theoretical pI: Translated: 8.85; Mature: 8.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHLLRFDRDYSRRAFLDATGKGLLRAGVFGSAWAAFLRTGSVAAAYPDELLSIEVYTKG CCCCHHCCCCCCCEEEECCCCCCHHHHCCHHHHHHHHHHCCCEEECCCCCEEEEEEEECC RLKPGDVIDAGNVELVKDLLDPVRYRQIATMGRKLLLAPTTTDLSHLNPLPYLEATARNR CCCCCCEECCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHCCCCCCHHHHHCCC GKARFDATGNIVTTEGKPWIGGNPFPEPTSALEMFAAHTLSWGRHDVSVYASKEYDLDPA CCEEEECCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCC GNLQYQYSSVWAEMSTVARTVIDPKPYWAGEADKLRYQSVLFTEPADARGTIFLNIWAYD CCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCHHHEEEEEEEEECCCCCCCEEEEEEEEEC QNQFPQLYGYLPAFKRVRSFPTNQRFEPLVAGAELYLSDAWAAGDPFLTWGNYQVVHRGP CCCCHHHHHHHHHHHHHHCCCCCCCCCHHHCCCEEEEECCCCCCCCEEEECCEEEEECCC HLAAVSRGWTSTHPNWEHTTHGGPKGNLFWDHAVELVPEVIVIEAEPVRYPRAPVGRKRV CEEEEECCCCCCCCCCCCCCCCCCCCCEEHHHHHHHCCEEEEEECCCCCCCCCCCCCCEE WFDARTLVPFQMVSYDRRGELFRHFDASFAYYDDGKARVMDGKEPYWSWATVHAFNVQTN EEECCCCCCHHHHCCCHHHHHHHHHCCCEEEEECCCEEEECCCCCCCCEEEEEEEECCCH RMTRIEQVREVPGGHSMRVNDPSVYDKYLTTSAMQRLGN HHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure AHLLRFDRDYSRRAFLDATGKGLLRAGVFGSAWAAFLRTGSVAAAYPDELLSIEVYTKG CCCHHCCCCCCCEEEECCCCCCHHHHCCHHHHHHHHHHCCCEEECCCCCEEEEEEEECC RLKPGDVIDAGNVELVKDLLDPVRYRQIATMGRKLLLAPTTTDLSHLNPLPYLEATARNR CCCCCCEECCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHCCCCCCHHHHHCCC GKARFDATGNIVTTEGKPWIGGNPFPEPTSALEMFAAHTLSWGRHDVSVYASKEYDLDPA CCEEEECCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCC GNLQYQYSSVWAEMSTVARTVIDPKPYWAGEADKLRYQSVLFTEPADARGTIFLNIWAYD CCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCHHHEEEEEEEEECCCCCCCEEEEEEEEEC QNQFPQLYGYLPAFKRVRSFPTNQRFEPLVAGAELYLSDAWAAGDPFLTWGNYQVVHRGP CCCCHHHHHHHHHHHHHHCCCCCCCCCHHHCCCEEEEECCCCCCCCEEEECCEEEEECCC HLAAVSRGWTSTHPNWEHTTHGGPKGNLFWDHAVELVPEVIVIEAEPVRYPRAPVGRKRV CEEEEECCCCCCCCCCCCCCCCCCCCCEEHHHHHHHCCEEEEEECCCCCCCCCCCCCCEE WFDARTLVPFQMVSYDRRGELFRHFDASFAYYDDGKARVMDGKEPYWSWATVHAFNVQTN EEECCCCCCHHHHCCCHHHHHHHHHCCCEEEEECCCEEEECCCCCCCCEEEEEEEECCCH RMTRIEQVREVPGGHSMRVNDPSVYDKYLTTSAMQRLGN HHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA