| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is 124266080
Identifier: 124266080
GI number: 124266080
Start: 930660
End: 931712
Strand: Direct
Name: 124266080
Synonym: Mpe_A0887
Alternate gene names: NA
Gene position: 930660-931712 (Clockwise)
Preceding gene: 124266079
Following gene: 124266081
Centisome position: 23.01
GC content: 69.14
Gene sequence:
>1053_bases ATGGCTGCGCGTCATCTAGACGAGCGGAGGCGCGTCGCTCGCAGCGGCCGACTGCAGTCTGCCCCGCTGCTGGCCCGGCT AGCGGTAGTGTTCGTTCTCTGCGGCGGACCTGCCTCTACACCGGCTCAATCCGCTGGCGCCGTCCCGGGGGTGCCGGTGG CGGCGACCTTCAAGCAGATCCGTCATGGCACGCACCATGACGCGCTGTACGACGTGGCGTTCGAGGGTGAGCGCGGCATC GCGGTGGGGGCGTTCGGCAACGTGCTCGTGACGGCCGACGGCGGGGCGACCTGGCAGGTACAGCCCTTCCCGATGAAGCA CCTGGCCTTGATGGCCGTGGCCATGCGCGAAGGCAAGTGCATCGCCGTCGGACAGACCGGGCTGGTGTACTCCGCGGCGG ACTGCAAGACCTGGAAGGCCTCGCCCTCCATGACCAAGTCGCGCCTGCTCGCCGTCGGCGTCAATCGCCAGGGCGTGGCC TACGCGGTGGGCGCGTTCGGGACCATCCTCAAGTCCAGCGACTGGGGCCAGTCCTGGGCGGTGCAGACGGTCGACTGGAG CACCATCACCGAGGACGGTGCGGAGCCCCACCTGTACGACATCCACGTTGCCGACGATGGCACCGTCACTGCGGTCGGCG AATTCGAACTCGTCATGCGCAGCAGCGACGGCAAGCAGTGGAAGGCCCTGCACAAGGGCGAACGCTCCCTGTTCGGCCTG TCCGTCGTCGAGGGCGGCACCAAGATGTACGCCACCGGCCAGAGCGGCGCGCTGCTCAGCAGCGCCGACGGCGGCGCCAC CTGGGTGTCGCACAAGACCGGCACCGGCGCCATCCTCACCGGCGTGCACGCCACGCCCAAGGGCGAAGTGCTCGCCAGCG GCATCAACGCCGTGGTGCTCAGCCGCGACGGCGGGGCCTCCTGGAGCCCGCTGAACTCCAAGCTCGTGCGCAACGCCTGG TACCAGGCCCTCGCAGCCAGCGAAGGCCCGGGCGGCAAGCGACGCGTGGTGGCGGTAGGAGCGGGTGGGTCGATTCTCGA ACTTGATTTTTGA
Upstream 100 bases:
>100_bases TCACGTCGATCGCCGGCGGTATGTCCACGGCCTTCAACATCGACGGTCTCTACGAGAAGTACATGACCCAGCAGGCGCTG CAGCGCATGGGGACCTGAGT
Downstream 100 bases:
>100_bases ACCTACAACGAGGAGACAACAGCGTGAAGAAGATTCGTACAGAAATCTCTCAGCGGCACGCCATCGCAGCAGCTACGTTG GTCGCGCTGTGTGGGTCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: BNR Repeat-Containing Glycosyl Hydrolase; Glycosyl Hydrolase BNR Repeat; BNR/Asp-Box Repeat Protein; Glycosyl Hydrolase BNR Repeat-Containing Glycosyl Hydrolase; Glycosyl Hydrolase BNR Protein; Oxidoreductase; Photosystem II Stability/Assembly Factor-Like Protein; Glycosyl Hydrolase; Cell Wall/Surface Repeat Protein; BNR Repeat-Containing Protein; BNR/Asp-Box Repeat Domain Protein
Number of amino acids: Translated: 350; Mature: 349
Protein sequence:
>350_residues MAARHLDERRRVARSGRLQSAPLLARLAVVFVLCGGPASTPAQSAGAVPGVPVAATFKQIRHGTHHDALYDVAFEGERGI AVGAFGNVLVTADGGATWQVQPFPMKHLALMAVAMREGKCIAVGQTGLVYSAADCKTWKASPSMTKSRLLAVGVNRQGVA YAVGAFGTILKSSDWGQSWAVQTVDWSTITEDGAEPHLYDIHVADDGTVTAVGEFELVMRSSDGKQWKALHKGERSLFGL SVVEGGTKMYATGQSGALLSSADGGATWVSHKTGTGAILTGVHATPKGEVLASGINAVVLSRDGGASWSPLNSKLVRNAW YQALAASEGPGGKRRVVAVGAGGSILELDF
Sequences:
>Translated_350_residues MAARHLDERRRVARSGRLQSAPLLARLAVVFVLCGGPASTPAQSAGAVPGVPVAATFKQIRHGTHHDALYDVAFEGERGI AVGAFGNVLVTADGGATWQVQPFPMKHLALMAVAMREGKCIAVGQTGLVYSAADCKTWKASPSMTKSRLLAVGVNRQGVA YAVGAFGTILKSSDWGQSWAVQTVDWSTITEDGAEPHLYDIHVADDGTVTAVGEFELVMRSSDGKQWKALHKGERSLFGL SVVEGGTKMYATGQSGALLSSADGGATWVSHKTGTGAILTGVHATPKGEVLASGINAVVLSRDGGASWSPLNSKLVRNAW YQALAASEGPGGKRRVVAVGAGGSILELDF >Mature_349_residues AARHLDERRRVARSGRLQSAPLLARLAVVFVLCGGPASTPAQSAGAVPGVPVAATFKQIRHGTHHDALYDVAFEGERGIA VGAFGNVLVTADGGATWQVQPFPMKHLALMAVAMREGKCIAVGQTGLVYSAADCKTWKASPSMTKSRLLAVGVNRQGVAY AVGAFGTILKSSDWGQSWAVQTVDWSTITEDGAEPHLYDIHVADDGTVTAVGEFELVMRSSDGKQWKALHKGERSLFGLS VVEGGTKMYATGQSGALLSSADGGATWVSHKTGTGAILTGVHATPKGEVLASGINAVVLSRDGGASWSPLNSKLVRNAWY QALAASEGPGGKRRVVAVGAGGSILELDF
Specific function: Unknown
COG id: COG4447
COG function: function code R; Uncharacterized protein related to plant photosystem II stability/assembly factor
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36403; Mature: 36272
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAARHLDERRRVARSGRLQSAPLLARLAVVFVLCGGPASTPAQSAGAVPGVPVAATFKQI CCCCHHHHHHHHHHCCCCCCCHHHHHHHHHEEECCCCCCCCCHHCCCCCCCCHHHHHHHH RHGTHHDALYDVAFEGERGIAVGAFGNVLVTADGGATWQVQPFPMKHLALMAVAMREGKC HCCCCCCEEEEEEECCCCCEEEEECCCEEEEECCCCEEEECCCCHHHHHHHHHHHCCCCE IAVGQTGLVYSAADCKTWKASPSMTKSRLLAVGVNRQGVAYAVGAFGTILKSSDWGQSWA EEEECCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCEEEHHHHHHHHCCCCCCCCEE VQTVDWSTITEDGAEPHLYDIHVADDGTVTAVGEFELVMRSSDGKQWKALHKGERSLFGL EEEEECCEECCCCCCCEEEEEEEECCCCEEEEEEEEEEEECCCCHHHHHHHCCCCCEEEE SVVEGGTKMYATGQSGALLSSADGGATWVSHKTGTGAILTGVHATPKGEVLASGINAVVL EEECCCEEEEEECCCCCEEECCCCCEEEEECCCCCCEEEECCCCCCCCCEEECCCCEEEE SRDGGASWSPLNSKLVRNAWYQALAASEGPGGKRRVVAVGAGGSILELDF ECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEECC >Mature Secondary Structure AARHLDERRRVARSGRLQSAPLLARLAVVFVLCGGPASTPAQSAGAVPGVPVAATFKQI CCCHHHHHHHHHHCCCCCCCHHHHHHHHHEEECCCCCCCCCHHCCCCCCCCHHHHHHHH RHGTHHDALYDVAFEGERGIAVGAFGNVLVTADGGATWQVQPFPMKHLALMAVAMREGKC HCCCCCCEEEEEEECCCCCEEEEECCCEEEEECCCCEEEECCCCHHHHHHHHHHHCCCCE IAVGQTGLVYSAADCKTWKASPSMTKSRLLAVGVNRQGVAYAVGAFGTILKSSDWGQSWA EEEECCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCEEEHHHHHHHHCCCCCCCCEE VQTVDWSTITEDGAEPHLYDIHVADDGTVTAVGEFELVMRSSDGKQWKALHKGERSLFGL EEEEECCEECCCCCCCEEEEEEEECCCCEEEEEEEEEEEECCCCHHHHHHHCCCCCEEEE SVVEGGTKMYATGQSGALLSSADGGATWVSHKTGTGAILTGVHATPKGEVLASGINAVVL EEECCCEEEEEECCCCCEEECCCCCEEEEECCCCCCEEEECCCCCCCCCEEECCCCEEEE SRDGGASWSPLNSKLVRNAWYQALAASEGPGGKRRVVAVGAGGSILELDF ECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA