| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is 124266079
Identifier: 124266079
GI number: 124266079
Start: 929290
End: 930657
Strand: Direct
Name: 124266079
Synonym: Mpe_A0886
Alternate gene names: NA
Gene position: 929290-930657 (Clockwise)
Preceding gene: 124266078
Following gene: 124266080
Centisome position: 22.98
GC content: 62.94
Gene sequence:
>1368_bases ATGCATATCAGAAAGTACGACCACGACTACAGCCGCCGCTTCTTCATGGAGCAGGCCGCCAAGGGCATTGCCACGGCGGG TGTGCTGGGGCCGCTGTGGCCGATGATCGCGAACTCCGCGGACATCACCAAGGCCTACCCGGACGAGCTGATGTCGATCG ACGCCTGGTCCAAGGGCAAGATCAAGACCGGTGACTTCATCACCGCCGAGAACGTCGAGATCGTCAAGGAATTGCTCGAC CCCGTCGCGTATCACCACATCAAGACAATGGGTCGCAAGATCCGGATCGTGCCGACCACCCGCGACATCACGCGCATGTT CCCGGCCGAGTACCTCGAGGCAACGCTGCGCAACCAGGGTAAGGCCAAGCTCGACGCGAATAGCAACGTCGTCAGTTCCG ACGGCAAACCGTGGATCGGCGGCAACCCGTTCCCGGACGCCAAGACCGGCCTCGAAGTGGCCGCCAACCTCACGATGTGC TGGGGCCGCAAAGACAACTCGCTCACTGCGATCCGCGACTGGGAGGTCGCGCCAGATGGGTCGATGAGCTACCAGTACGA CTTCGCCTGGGTCGAGCAGAACACCACGGCGCGTGCCGACGGCAAGGTCTTGCCGGGCGGCGACGAACTGCTGCGCTACA ACGCTGTTTACTTCACCGGTCCGTCGGACGTCAAGGGCACCAGCTACCTGAACACCTGGTACTACGATCAGCGCAAGTTC CCCGAGCTCGTCGGCTACCTGCCGGCCTTCAAGCGCGTGCGCAAGTTCCCGACCAACCAGCGCTTCGAACCGCTGGTGCC CGGGATGAATCTCTACCTGTCGGACGCCTGGGCGGCGGGCGACCCGATGCTGACTTGGGGCAACTACAAGATCGTCGGGC GCGGCCCGATGCTCGGTGCGCAGTCGCAGACCTGGTACGGCGACCGTCCGAACTGGGAGCGTCCGGTGCAAGGCGGCCCG AAGAACCAAACCTTCTTCGAGACGCAGATGGAGCTGTGTCCCGATGTCGTGATCTTCGAGGCCGAGCCGACCGGCTACCC GCGCGCCCCGGTGGGCAAGAAGCGGGTGTGGGTCGACGTGCGCAACCAGATGTATGTCGCCTACATCACCTACGACCGGC GCGGCGAGATCTTCAAGTCCTTCGAGCCGCAATACAGCTTCCTGGAAAAGGGTGACAAGAAGCTTATGGACGGAAAGAGC ACGGCTTGGCACTGGACCGCGGTGCAGTGCTACAACTTCCAAGACGGGCGGATGACACGCTTCCAGCCCGTCACGTCGAT CGCCGGCGGTATGTCCACGGCCTTCAACATCGACGGTCTCTACGAGAAGTACATGACCCAGCAGGCGCTGCAGCGCATGG GGACCTGA
Upstream 100 bases:
>100_bases CCCTGGAGAAGAAGCCTCAGACGGCGGTGCCTGCCTGAGCCCTGTGAGTGCGCCCCCTGCTGGGGTCTGCGAATTGTCGA CAACGAAGTAGGAGACAGCC
Downstream 100 bases:
>100_bases GTATGGCTGCGCGTCATCTAGACGAGCGGAGGCGCGTCGCTCGCAGCGGCCGACTGCAGTCTGCCCCGCTGCTGGCCCGG CTAGCGGTAGTGTTCGTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 455; Mature: 455
Protein sequence:
>455_residues MHIRKYDHDYSRRFFMEQAAKGIATAGVLGPLWPMIANSADITKAYPDELMSIDAWSKGKIKTGDFITAENVEIVKELLD PVAYHHIKTMGRKIRIVPTTRDITRMFPAEYLEATLRNQGKAKLDANSNVVSSDGKPWIGGNPFPDAKTGLEVAANLTMC WGRKDNSLTAIRDWEVAPDGSMSYQYDFAWVEQNTTARADGKVLPGGDELLRYNAVYFTGPSDVKGTSYLNTWYYDQRKF PELVGYLPAFKRVRKFPTNQRFEPLVPGMNLYLSDAWAAGDPMLTWGNYKIVGRGPMLGAQSQTWYGDRPNWERPVQGGP KNQTFFETQMELCPDVVIFEAEPTGYPRAPVGKKRVWVDVRNQMYVAYITYDRRGEIFKSFEPQYSFLEKGDKKLMDGKS TAWHWTAVQCYNFQDGRMTRFQPVTSIAGGMSTAFNIDGLYEKYMTQQALQRMGT
Sequences:
>Translated_455_residues MHIRKYDHDYSRRFFMEQAAKGIATAGVLGPLWPMIANSADITKAYPDELMSIDAWSKGKIKTGDFITAENVEIVKELLD PVAYHHIKTMGRKIRIVPTTRDITRMFPAEYLEATLRNQGKAKLDANSNVVSSDGKPWIGGNPFPDAKTGLEVAANLTMC WGRKDNSLTAIRDWEVAPDGSMSYQYDFAWVEQNTTARADGKVLPGGDELLRYNAVYFTGPSDVKGTSYLNTWYYDQRKF PELVGYLPAFKRVRKFPTNQRFEPLVPGMNLYLSDAWAAGDPMLTWGNYKIVGRGPMLGAQSQTWYGDRPNWERPVQGGP KNQTFFETQMELCPDVVIFEAEPTGYPRAPVGKKRVWVDVRNQMYVAYITYDRRGEIFKSFEPQYSFLEKGDKKLMDGKS TAWHWTAVQCYNFQDGRMTRFQPVTSIAGGMSTAFNIDGLYEKYMTQQALQRMGT >Mature_455_residues MHIRKYDHDYSRRFFMEQAAKGIATAGVLGPLWPMIANSADITKAYPDELMSIDAWSKGKIKTGDFITAENVEIVKELLD PVAYHHIKTMGRKIRIVPTTRDITRMFPAEYLEATLRNQGKAKLDANSNVVSSDGKPWIGGNPFPDAKTGLEVAANLTMC WGRKDNSLTAIRDWEVAPDGSMSYQYDFAWVEQNTTARADGKVLPGGDELLRYNAVYFTGPSDVKGTSYLNTWYYDQRKF PELVGYLPAFKRVRKFPTNQRFEPLVPGMNLYLSDAWAAGDPMLTWGNYKIVGRGPMLGAQSQTWYGDRPNWERPVQGGP KNQTFFETQMELCPDVVIFEAEPTGYPRAPVGKKRVWVDVRNQMYVAYITYDRRGEIFKSFEPQYSFLEKGDKKLMDGKS TAWHWTAVQCYNFQDGRMTRFQPVTSIAGGMSTAFNIDGLYEKYMTQQALQRMGT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51786; Mature: 51786
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHIRKYDHDYSRRFFMEQAAKGIATAGVLGPLWPMIANSADITKAYPDELMSIDAWSKGK CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCHHHHCCCCCCCCC IKTGDFITAENVEIVKELLDPVAYHHIKTMGRKIRIVPTTRDITRMFPAEYLEATLRNQG CCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHCCHHHHHHHHHCCC KAKLDANSNVVSSDGKPWIGGNPFPDAKTGLEVAANLTMCWGRKDNSLTAIRDWEVAPDG CEEECCCCCEECCCCCCCCCCCCCCCCHHCHHHHCCEEEEECCCCCCEEEEEECCCCCCC SMSYQYDFAWVEQNTTARADGKVLPGGDELLRYNAVYFTGPSDVKGTSYLNTWYYDQRKF CCEEEEEEEEEECCCCCCCCCCCCCCCHHEEEEEEEEEECCCCCCCCCEEEEEECCCHHH PELVGYLPAFKRVRKFPTNQRFEPLVPGMNLYLSDAWAAGDPMLTWGNYKIVGRGPMLGA HHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCEEEECCEEEEECCCCCCC QSQTWYGDRPNWERPVQGGPKNQTFFETQMELCPDVVIFEAEPTGYPRAPVGKKRVWVDV CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEEE RNQMYVAYITYDRRGEIFKSFEPQYSFLEKGDKKLMDGKSTAWHWTAVQCYNFQDGRMTR CCCEEEEEEEECCCCCHHHHCCCCHHHHHCCCHHHHCCCCCEEEEEEEEEEECCCCCEEE FQPVTSIAGGMSTAFNIDGLYEKYMTQQALQRMGT ECHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MHIRKYDHDYSRRFFMEQAAKGIATAGVLGPLWPMIANSADITKAYPDELMSIDAWSKGK CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCHHHHCCCCCCCCC IKTGDFITAENVEIVKELLDPVAYHHIKTMGRKIRIVPTTRDITRMFPAEYLEATLRNQG CCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHCCHHHHHHHHHCCC KAKLDANSNVVSSDGKPWIGGNPFPDAKTGLEVAANLTMCWGRKDNSLTAIRDWEVAPDG CEEECCCCCEECCCCCCCCCCCCCCCCHHCHHHHCCEEEEECCCCCCEEEEEECCCCCCC SMSYQYDFAWVEQNTTARADGKVLPGGDELLRYNAVYFTGPSDVKGTSYLNTWYYDQRKF CCEEEEEEEEEECCCCCCCCCCCCCCCHHEEEEEEEEEECCCCCCCCCEEEEEECCCHHH PELVGYLPAFKRVRKFPTNQRFEPLVPGMNLYLSDAWAAGDPMLTWGNYKIVGRGPMLGA HHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCEEEECCEEEEECCCCCCC QSQTWYGDRPNWERPVQGGPKNQTFFETQMELCPDVVIFEAEPTGYPRAPVGKKRVWVDV CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEEE RNQMYVAYITYDRRGEIFKSFEPQYSFLEKGDKKLMDGKSTAWHWTAVQCYNFQDGRMTR CCCEEEEEEEECCCCCHHHHCCCCHHHHHCCCHHHHCCCCCEEEEEEEEEEECCCCCEEE FQPVTSIAGGMSTAFNIDGLYEKYMTQQALQRMGT ECHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA