| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is 124266081
Identifier: 124266081
GI number: 124266081
Start: 931736
End: 933589
Strand: Direct
Name: 124266081
Synonym: Mpe_A0888
Alternate gene names: NA
Gene position: 931736-933589 (Clockwise)
Preceding gene: 124266080
Following gene: 124266082
Centisome position: 23.04
GC content: 64.02
Gene sequence:
>1854_bases GTGAAGAAGATTCGTACAGAAATCTCTCAGCGGCACGCCATCGCAGCAGCTACGTTGGTCGCGCTGTGTGGGTCGGCCCA AGCGGCCGACTGGGAAGTTTCCGGCATGATCCGGCAGGAGTTGGCGGTAAAGACCACCGACGATCAGAACAACACCAATC AGTACGGCAATGCCCAGAACGGTGTGCCCTACACGAATACCAGCTTGGTGACTGGTGGTGTTGTTCCCACTCTGACCCGT CCTGGCGCCTTCAAGAAGGACGCCGACGTCAATTGGTTCGCGACGCGGCTCGAACTCAACTTCGACGGCAAGCTCAGCGA ATCGATGAAGGCCACGATCAAGCTGCGCGGCATCCTCGATGAAACCCGGGTCGTCGACGACGCCTATGGCACCCGCACGG CGGGGGGCGTCAACACCGGCTCCGGGAACCTCTTGGCTGGCAGCAGCTTCCGTCAGCAGTTCGGCGGCACCGCCGGCGGC CCGCTGGCCTACGCCAACGACCGCGCGCTGATCGACCTGCCGGCCTTCTACATCGACTACAACAACGGCCCGCTGTGGCT GCGCGCGGGAAACCAGCAGATCGCCTGGGGCGAGGCGCTGTTCTTCCGCGTGGCCGACCAGCCCAACGGCCTGGACCTGC GGGGCCACCTGTTCGGCGTCGCTGCCGAGGAGTACTCCGATACCCGCCGCTCCGCGCTCGGCCTGCGGATGAACTACCGC GTCAACGAGGAGACGGACGTCGACGGTTTCATCCAGCGCTTCGCGCCGTCGCTGTTGCCCAACGGGGAAACGGCCTACAA CGTCATCCAGGATCAGTTCACCGTCGACCAGAAGCCCGGCTACGACCATGTCAAGAACAAGTGGAACGTCGGCTTCCGGG TGAAGGGCGAGGCCGGCGGCTTCGGCTACCAGGCCTTCGCGATCAACCGCACCAACCCCGACGGCGTCTTCAAGTGGTCG GCCGCCAAGGGCGACGGTGTGCTGCCCGGCACCGCCTTTGCCATTAATCCAACCGGCGTCTACAACGCCGCCGATTGGTT CAAATCGGCGGCTAACTCGCGCTTGGACGGCATCGAGGGCGTCGCGACCTCATTGAACTTCATCACCGCCGCGGGCGATC CCTACGGGCTTGTCGGCTTGGCCACGGCTTGTGGCGCCGAACGTGCGGTCTACGGGGACTTCAGACTCGGCAACAGTGCG GCAGCGTCATGTATCCTGGATACCTTTTTCACGCCGGGGGTGGCTGGACCGCTGCGTGGCTGGCTGAGCCGCGAGTACAA GCGCGAGACGGTGTTCGGTGGCGGCATCAACCGCGTGTTCGAGGGCGAACCCGCCTCGCTGCTCGACCAGCTGATCGGGC GCTTCGAGTTCTCGTACACGCCCAACAAGCACTTCACCAACCCGACGCTGGGTGACTACATCAAGAAGGACGAGTACCAG TTCGCGCTCATCCTCGAGAAGTACCACAAGTTCACCAGCGCCTTCCCGGCGACCTACTTCGTGGCGCAGTGGCTGCACAA GTCCAGGAGCGACCTGTTCGGGCGCTACCTGGGTGGCGTGGACAACCAGCCGGGGTCGGCGCCGAACGGGCAGTCGGGCG GCTTCAACGCGCTGGCGCTGGCGCTGCAGCAGGCCTCGCCGACGCTGGAGTACCGCTTCGACTTTTCGATCCTGACCGAC ACCAAGGGCGGCTGGTACATGCAGCCGGGCGTGAAGTGGAAGCCCACCAAGTCGATCCAGGCGGACCTCTACCTCAACGC CGTGTACTCCCAGAACAAGGGCGAGTACCGCGACTTCGTCGACGGCCTGCAGCACAACAACGAAATCTTCGCCCGCGTGG CTTATCAGTTCTGA
Upstream 100 bases:
>100_bases CCAGCGAAGGCCCGGGCGGCAAGCGACGCGTGGTGGCGGTAGGAGCGGGTGGGTCGATTCTCGAACTTGATTTTTGAACC TACAACGAGGAGACAACAGC
Downstream 100 bases:
>100_bases GTGGTCGTCATGGTGTGCGTCGAACCGGCCGCCCGGCGGGCCGGTTTCGACGACGACACGCACCGGCCGCTCGCGCAGCC GGTGCTTTTTTCTTTGTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 617; Mature: 617
Protein sequence:
>617_residues MKKIRTEISQRHAIAAATLVALCGSAQAADWEVSGMIRQELAVKTTDDQNNTNQYGNAQNGVPYTNTSLVTGGVVPTLTR PGAFKKDADVNWFATRLELNFDGKLSESMKATIKLRGILDETRVVDDAYGTRTAGGVNTGSGNLLAGSSFRQQFGGTAGG PLAYANDRALIDLPAFYIDYNNGPLWLRAGNQQIAWGEALFFRVADQPNGLDLRGHLFGVAAEEYSDTRRSALGLRMNYR VNEETDVDGFIQRFAPSLLPNGETAYNVIQDQFTVDQKPGYDHVKNKWNVGFRVKGEAGGFGYQAFAINRTNPDGVFKWS AAKGDGVLPGTAFAINPTGVYNAADWFKSAANSRLDGIEGVATSLNFITAAGDPYGLVGLATACGAERAVYGDFRLGNSA AASCILDTFFTPGVAGPLRGWLSREYKRETVFGGGINRVFEGEPASLLDQLIGRFEFSYTPNKHFTNPTLGDYIKKDEYQ FALILEKYHKFTSAFPATYFVAQWLHKSRSDLFGRYLGGVDNQPGSAPNGQSGGFNALALALQQASPTLEYRFDFSILTD TKGGWYMQPGVKWKPTKSIQADLYLNAVYSQNKGEYRDFVDGLQHNNEIFARVAYQF
Sequences:
>Translated_617_residues MKKIRTEISQRHAIAAATLVALCGSAQAADWEVSGMIRQELAVKTTDDQNNTNQYGNAQNGVPYTNTSLVTGGVVPTLTR PGAFKKDADVNWFATRLELNFDGKLSESMKATIKLRGILDETRVVDDAYGTRTAGGVNTGSGNLLAGSSFRQQFGGTAGG PLAYANDRALIDLPAFYIDYNNGPLWLRAGNQQIAWGEALFFRVADQPNGLDLRGHLFGVAAEEYSDTRRSALGLRMNYR VNEETDVDGFIQRFAPSLLPNGETAYNVIQDQFTVDQKPGYDHVKNKWNVGFRVKGEAGGFGYQAFAINRTNPDGVFKWS AAKGDGVLPGTAFAINPTGVYNAADWFKSAANSRLDGIEGVATSLNFITAAGDPYGLVGLATACGAERAVYGDFRLGNSA AASCILDTFFTPGVAGPLRGWLSREYKRETVFGGGINRVFEGEPASLLDQLIGRFEFSYTPNKHFTNPTLGDYIKKDEYQ FALILEKYHKFTSAFPATYFVAQWLHKSRSDLFGRYLGGVDNQPGSAPNGQSGGFNALALALQQASPTLEYRFDFSILTD TKGGWYMQPGVKWKPTKSIQADLYLNAVYSQNKGEYRDFVDGLQHNNEIFARVAYQF >Mature_617_residues MKKIRTEISQRHAIAAATLVALCGSAQAADWEVSGMIRQELAVKTTDDQNNTNQYGNAQNGVPYTNTSLVTGGVVPTLTR PGAFKKDADVNWFATRLELNFDGKLSESMKATIKLRGILDETRVVDDAYGTRTAGGVNTGSGNLLAGSSFRQQFGGTAGG PLAYANDRALIDLPAFYIDYNNGPLWLRAGNQQIAWGEALFFRVADQPNGLDLRGHLFGVAAEEYSDTRRSALGLRMNYR VNEETDVDGFIQRFAPSLLPNGETAYNVIQDQFTVDQKPGYDHVKNKWNVGFRVKGEAGGFGYQAFAINRTNPDGVFKWS AAKGDGVLPGTAFAINPTGVYNAADWFKSAANSRLDGIEGVATSLNFITAAGDPYGLVGLATACGAERAVYGDFRLGNSA AASCILDTFFTPGVAGPLRGWLSREYKRETVFGGGINRVFEGEPASLLDQLIGRFEFSYTPNKHFTNPTLGDYIKKDEYQ FALILEKYHKFTSAFPATYFVAQWLHKSRSDLFGRYLGGVDNQPGSAPNGQSGGFNALALALQQASPTLEYRFDFSILTD TKGGWYMQPGVKWKPTKSIQADLYLNAVYSQNKGEYRDFVDGLQHNNEIFARVAYQF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67484; Mature: 67484
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIRTEISQRHAIAAATLVALCGSAQAADWEVSGMIRQELAVKTTDDQNNTNQYGNAQN CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHEEEECCCCCCCCCCCCCCC GVPYTNTSLVTGGVVPTLTRPGAFKKDADVNWFATRLELNFDGKLSESMKATIKLRGILD CCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEEEECHH ETRVVDDAYGTRTAGGVNTGSGNLLAGSSFRQQFGGTAGGPLAYANDRALIDLPAFYIDY HHHHHHCCCCCCCCCCCCCCCCCEEECCHHHHHHCCCCCCCCEEECCCEEEEEEEEEEEE NNGPLWLRAGNQQIAWGEALFFRVADQPNGLDLRGHLFGVAAEEYSDTRRSALGLRMNYR CCCEEEEEECCCEEEECEEEEEEECCCCCCCEEEEEEEEEEHHHHHHHHHHHHCEEEEEE VNEETDVDGFIQRFAPSLLPNGETAYNVIQDQFTVDQKPGYDHVKNKWNVGFRVKGEAGG ECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHEECCCCCCHHHHCCCCCCCEEEECCCCC FGYQAFAINRTNPDGVFKWSAAKGDGVLPGTAFAINPTGVYNAADWFKSAANSRLDGIEG CCEEEEEEECCCCCCEEEEECCCCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCHHH VATSLNFITAAGDPYGLVGLATACGAERAVYGDFRLGNSAAASCILDTFFTPGVAGPLRG HHHHCEEEEECCCCCCHHHHHHHCCCCCEEEECEECCCHHHHHHHHHHHCCCCCCHHHHH WLSREYKRETVFGGGINRVFEGEPASLLDQLIGRFEFSYTPNKHFTNPTLGDYIKKDEYQ HHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHEEECCCCCCCCCCCCHHHHHCCCCCE FALILEKYHKFTSAFPATYFVAQWLHKSRSDLFGRYLGGVDNQPGSAPNGQSGGFNALAL EHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHH ALQQASPTLEYRFDFSILTDTKGGWYMQPGVKWKPTKSIQADLYLNAVYSQNKGEYRDFV HHHHCCCCEEEEEEEEEEEECCCCEEECCCCCCCCCCCCEEEEEEEEEECCCCCHHHHHH DGLQHNNEIFARVAYQF HHHHCCCEEEEEEEECC >Mature Secondary Structure MKKIRTEISQRHAIAAATLVALCGSAQAADWEVSGMIRQELAVKTTDDQNNTNQYGNAQN CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHEEEECCCCCCCCCCCCCCC GVPYTNTSLVTGGVVPTLTRPGAFKKDADVNWFATRLELNFDGKLSESMKATIKLRGILD CCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEEEECHH ETRVVDDAYGTRTAGGVNTGSGNLLAGSSFRQQFGGTAGGPLAYANDRALIDLPAFYIDY HHHHHHCCCCCCCCCCCCCCCCCEEECCHHHHHHCCCCCCCCEEECCCEEEEEEEEEEEE NNGPLWLRAGNQQIAWGEALFFRVADQPNGLDLRGHLFGVAAEEYSDTRRSALGLRMNYR CCCEEEEEECCCEEEECEEEEEEECCCCCCCEEEEEEEEEEHHHHHHHHHHHHCEEEEEE VNEETDVDGFIQRFAPSLLPNGETAYNVIQDQFTVDQKPGYDHVKNKWNVGFRVKGEAGG ECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHEECCCCCCHHHHCCCCCCCEEEECCCCC FGYQAFAINRTNPDGVFKWSAAKGDGVLPGTAFAINPTGVYNAADWFKSAANSRLDGIEG CCEEEEEEECCCCCCEEEEECCCCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCHHH VATSLNFITAAGDPYGLVGLATACGAERAVYGDFRLGNSAAASCILDTFFTPGVAGPLRG HHHHCEEEEECCCCCCHHHHHHHCCCCCEEEECEECCCHHHHHHHHHHHCCCCCCHHHHH WLSREYKRETVFGGGINRVFEGEPASLLDQLIGRFEFSYTPNKHFTNPTLGDYIKKDEYQ HHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHEEECCCCCCCCCCCCHHHHHCCCCCE FALILEKYHKFTSAFPATYFVAQWLHKSRSDLFGRYLGGVDNQPGSAPNGQSGGFNALAL EHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHH ALQQASPTLEYRFDFSILTDTKGGWYMQPGVKWKPTKSIQADLYLNAVYSQNKGEYRDFV HHHHCCCCEEEEEEEEEEEECCCCEEECCCCCCCCCCCCEEEEEEEEEECCCCCHHHHHH DGLQHNNEIFARVAYQF HHHHCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA