| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is hisB
Identifier: 124266026
GI number: 124266026
Start: 873540
End: 874139
Strand: Direct
Name: hisB
Synonym: Mpe_A0833
Alternate gene names: 124266026
Gene position: 873540-874139 (Clockwise)
Preceding gene: 124266025
Following gene: 124266027
Centisome position: 21.6
GC content: 68.33
Gene sequence:
>600_bases ATGACCGAACCGAACCGTGTTGCCGAAGTCCGGCGCGACACCGCCGAAACGAAGATCCGCGTGCGCGTCGACCTCGACGG CACGGGCGTGGCCAGGCTCGCCACCGGCATCGGCTTCTTCGACCACATGCTCGACCAGCTGGCGCGCCACGGGCTGGTCG ACCTGGAGATCGAGGCCGACGGCGACCTGCACATCGACGGTCACCACACCGTCGAGGACGTTGGCATCACGCTCGGTCAG GCCTTCGCCAAGGCGGTCGGCGACAAGAAGGGGCTGCGTCGCTACGGCCATGCCTACGTGCCGCTCGACGAGGCGCTGAG CCGCGTGGTGGTCGACTTCTCCGGCCGGCCCGGGCTGCACATGCGCGTGCCGTTCAAGGCCGGCATGATCGGCGCGCTCG ACACCCAGCTGGTCTACGAGTTCTTCCAGGGCTTCGTGAACCATGCCGGCGTCACGCTGCACATCGACAACCTGCACGGC GACAACGCCCACCACCAGTGCGAGACGGTCTTCAAGGCCTTCGCCCGAGCGCTGCGCATGGCGCTGGAGCGCGACCCGCG CATGGCCGGCGTCATCCCTTCCACCAAGGGCAGCCTCTGA
Upstream 100 bases:
>100_bases TGTCCGGCCTGCACCCGCTGCTGGCAAACTGCCTGCGCCTCACCGTCGGCCTGCCCGAAGAGAACGACCAGATGATCGCG GCCCTGAAAGGCATCCTGTC
Downstream 100 bases:
>100_bases CATGAGCCGTCGCGTGGCGGTCATCGACTACGGCATGGGCAACCTGCGCTCGGTGTCGCAGGCCGTGCTGCACGCGGCCG CCGGGACCGGCTTCGAGGTG
Product: imidazoleglycerol-phosphate dehydratase
Products: NA
Alternate protein names: IGPD
Number of amino acids: Translated: 199; Mature: 198
Protein sequence:
>199_residues MTEPNRVAEVRRDTAETKIRVRVDLDGTGVARLATGIGFFDHMLDQLARHGLVDLEIEADGDLHIDGHHTVEDVGITLGQ AFAKAVGDKKGLRRYGHAYVPLDEALSRVVVDFSGRPGLHMRVPFKAGMIGALDTQLVYEFFQGFVNHAGVTLHIDNLHG DNAHHQCETVFKAFARALRMALERDPRMAGVIPSTKGSL
Sequences:
>Translated_199_residues MTEPNRVAEVRRDTAETKIRVRVDLDGTGVARLATGIGFFDHMLDQLARHGLVDLEIEADGDLHIDGHHTVEDVGITLGQ AFAKAVGDKKGLRRYGHAYVPLDEALSRVVVDFSGRPGLHMRVPFKAGMIGALDTQLVYEFFQGFVNHAGVTLHIDNLHG DNAHHQCETVFKAFARALRMALERDPRMAGVIPSTKGSL >Mature_198_residues TEPNRVAEVRRDTAETKIRVRVDLDGTGVARLATGIGFFDHMLDQLARHGLVDLEIEADGDLHIDGHHTVEDVGITLGQA FAKAVGDKKGLRRYGHAYVPLDEALSRVVVDFSGRPGLHMRVPFKAGMIGALDTQLVYEFFQGFVNHAGVTLHIDNLHGD NAHHQCETVFKAFARALRMALERDPRMAGVIPSTKGSL
Specific function: Histidine biosynthesis; sixth step. Histidine biosynthesis; eighth step. [C]
COG id: COG0131
COG function: function code E; Imidazoleglycerol-phosphate dehydratase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the imidazoleglycerol-phosphate dehydratase family
Homologues:
Organism=Escherichia coli, GI87082027, Length=200, Percent_Identity=47, Blast_Score=177, Evalue=5e-46, Organism=Saccharomyces cerevisiae, GI6324776, Length=223, Percent_Identity=41.2556053811659, Blast_Score=162, Evalue=3e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS7_METPP (A2SE06)
Other databases:
- EMBL: CP000555 - RefSeq: YP_001020030.1 - ProteinModelPortal: A2SE06 - SMR: A2SE06 - STRING: A2SE06 - GeneID: 4786968 - GenomeReviews: CP000555_GR - KEGG: mpt:Mpe_A0833 - NMPDR: fig|279263.3.peg.2042 - eggNOG: COG0131 - HOGENOM: HBG289010 - OMA: TLHVETL - PhylomeDB: A2SE06 - BioCyc: MPET420662:MPE_A0833-MONOMER - GO: GO:0005737 - HAMAP: MF_00076 - InterPro: IPR000807 - InterPro: IPR020565 - InterPro: IPR020568
Pfam domain/function: PF00475 IGPD; SSF54211 Ribosomal_S5_D2-typ_fold
EC number: =4.2.1.19
Molecular weight: Translated: 21858; Mature: 21727
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: PS00954 IGP_DEHYDRATASE_1; PS00955 IGP_DEHYDRATASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEPNRVAEVRRDTAETKIRVRVDLDGTGVARLATGIGFFDHMLDQLARHGLVDLEIEAD CCCCHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECC GDLHIDGHHTVEDVGITLGQAFAKAVGDKKGLRRYGHAYVPLDEALSRVVVDFSGRPGLH CCEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCE MRVPFKAGMIGALDTQLVYEFFQGFVNHAGVTLHIDNLHGDNAHHQCETVFKAFARALRM EECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHH ALERDPRMAGVIPSTKGSL HHHCCCCCCCCCCCCCCCC >Mature Secondary Structure TEPNRVAEVRRDTAETKIRVRVDLDGTGVARLATGIGFFDHMLDQLARHGLVDLEIEAD CCCHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECC GDLHIDGHHTVEDVGITLGQAFAKAVGDKKGLRRYGHAYVPLDEALSRVVVDFSGRPGLH CCEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCE MRVPFKAGMIGALDTQLVYEFFQGFVNHAGVTLHIDNLHGDNAHHQCETVFKAFARALRM EECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHH ALERDPRMAGVIPSTKGSL HHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA