The gene/protein map for NC_008825 is currently unavailable.
Definition Methylibium petroleiphilum PM1 chromosome, complete genome.
Accession NC_008825
Length 4,044,195

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The map label for this gene is ureB

Identifier: 124265861

GI number: 124265861

Start: 705098

End: 705406

Strand: Reverse

Name: ureB

Synonym: Mpe_A0668

Alternate gene names: 124265861

Gene position: 705406-705098 (Counterclockwise)

Preceding gene: 124265862

Following gene: 124265860

Centisome position: 17.44

GC content: 69.26

Gene sequence:

>309_bases
ATGACGCCTGGAGAGCTGTTGCCGTCCGACGGACCGGACCATGTGCTGAACCCCGATCGCCGCACGCTGACGCTGGTGAT
CGAGAACGGTGGCGACCGGCCGATCCAGGTCGGCTCGCACTACCACTTCGCCGAGACCAACGGCGCGCTGCGCTTCGACC
GCGCCGCGGCCCACGGCATGCGGCTCAACATCGCCTCGGGCACCGCAGTGCGCTTCGAGCCCGGCCAGCAGCGCACTGTC
GAGCTGGTCGACTACGCCGGCGACCGCACGGTCTACGGCTTCCGCGGCCTCGTGCAAGGAAAGCTCTGA

Upstream 100 bases:

>100_bases
GGCGTGGCCGAGATGATCCCGGACATCCAGGTCGAGGCGACCTTCCCGGACGGCACCAAATTGGTGACCGTGCACCAACC
CATTGCATGAGGCCGCTCAC

Downstream 100 bases:

>100_bases
CATGGCCACCATCGGACGCCGCGCCTACGCGGAGATGTACGGACCGACGGTGGGCGACCGCGTGCGGCTGGCCGACACCG
AACTCGTTATCGAGGTCGAG

Product: urease subunit beta

Products: NA

Alternate protein names: Urea amidohydrolase subunit beta

Number of amino acids: Translated: 102; Mature: 101

Protein sequence:

>102_residues
MTPGELLPSDGPDHVLNPDRRTLTLVIENGGDRPIQVGSHYHFAETNGALRFDRAAAHGMRLNIASGTAVRFEPGQQRTV
ELVDYAGDRTVYGFRGLVQGKL

Sequences:

>Translated_102_residues
MTPGELLPSDGPDHVLNPDRRTLTLVIENGGDRPIQVGSHYHFAETNGALRFDRAAAHGMRLNIASGTAVRFEPGQQRTV
ELVDYAGDRTVYGFRGLVQGKL
>Mature_101_residues
TPGELLPSDGPDHVLNPDRRTLTLVIENGGDRPIQVGSHYHFAETNGALRFDRAAAHGMRLNIASGTAVRFEPGQQRTVE
LVDYAGDRTVYGFRGLVQGKL

Specific function: Unknown

COG id: COG0832

COG function: function code E; Urea amidohydrolase (urease) beta subunit

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the urease beta subunit family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): URE2_METPP (A2SDJ1)

Other databases:

- EMBL:   CP000555
- RefSeq:   YP_001019865.1
- ProteinModelPortal:   A2SDJ1
- SMR:   A2SDJ1
- STRING:   A2SDJ1
- GeneID:   4784795
- GenomeReviews:   CP000555_GR
- KEGG:   mpt:Mpe_A0668
- NMPDR:   fig|279263.3.peg.3232
- eggNOG:   COG0832
- HOGENOM:   HBG365918
- OMA:   RETAYGM
- ProtClustDB:   PRK13203
- BioCyc:   MPET420662:MPE_A0668-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01954
- InterPro:   IPR002019
- Gene3D:   G3DSA:2.10.150.10
- TIGRFAMs:   TIGR00192

Pfam domain/function: PF00699 Urease_beta; SSF51278 Urease_beta

EC number: =3.5.1.5

Molecular weight: Translated: 11144; Mature: 11012

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPGELLPSDGPDHVLNPDRRTLTLVIENGGDRPIQVGSHYHFAETNGALRFDRAAAHGM
CCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEECCEEEEECCCCCEEECCCCCCCE
RLNIASGTAVRFEPGQQRTVELVDYAGDRTVYGFRGLVQGKL
EEEECCCCEEEECCCCCCEEEEEECCCCEEEEEECEEEECCC
>Mature Secondary Structure 
TPGELLPSDGPDHVLNPDRRTLTLVIENGGDRPIQVGSHYHFAETNGALRFDRAAAHGM
CCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEECCEEEEECCCCCEEECCCCCCCE
RLNIASGTAVRFEPGQQRTVELVDYAGDRTVYGFRGLVQGKL
EEEECCCCEEEECCCCCCEEEEEECCCCEEEEEECEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA