Definition Methylibium petroleiphilum PM1 chromosome, complete genome.
Accession NC_008825
Length 4,044,195

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The map label for this gene is ureA

Identifier: 124265862

GI number: 124265862

Start: 705417

End: 705719

Strand: Reverse

Name: ureA

Synonym: Mpe_A0669

Alternate gene names: 124265862

Gene position: 705719-705417 (Counterclockwise)

Preceding gene: 124265865

Following gene: 124265861

Centisome position: 17.45

GC content: 68.98

Gene sequence:

>303_bases
ATGGACCTGACGCCCCGCGAGAAAGACAAGCTGCTGATCTTCACCGCCGCGCTGCTGGCCGAACGGCGCCGGGCCCGGGG
CCTGAAGCTCAACCACCCGGAGGCCGTGGCGCTGATCACCGCCGCGATCCTGGAAGGCGCCCGCGACGGGCAGAGCGTGG
CCCAGCTGATGAGCGCGGGCCAGCAGGTGCTGACCCGGGCCGACGTGATGGACGGCGTGGCCGAGATGATCCCGGACATC
CAGGTCGAGGCGACCTTCCCGGACGGCACCAAATTGGTGACCGTGCACCAACCCATTGCATGA

Upstream 100 bases:

>100_bases
CATGGGCAGCAGGGTTGTACCTCACCGATCAAGAACCGCACCAGCCGGCCCGGACGCCGGTGCACTAGCATGGCATCCAT
CCTGCTCACAGCGCCCCGCC

Downstream 100 bases:

>100_bases
GGCCGCTCACATGACGCCTGGAGAGCTGTTGCCGTCCGACGGACCGGACCATGTGCTGAACCCCGATCGCCGCACGCTGA
CGCTGGTGATCGAGAACGGT

Product: urease

Products: NA

Alternate protein names: Urea amidohydrolase subunit gamma

Number of amino acids: Translated: 100; Mature: 100

Protein sequence:

>100_residues
MDLTPREKDKLLIFTAALLAERRRARGLKLNHPEAVALITAAILEGARDGQSVAQLMSAGQQVLTRADVMDGVAEMIPDI
QVEATFPDGTKLVTVHQPIA

Sequences:

>Translated_100_residues
MDLTPREKDKLLIFTAALLAERRRARGLKLNHPEAVALITAAILEGARDGQSVAQLMSAGQQVLTRADVMDGVAEMIPDI
QVEATFPDGTKLVTVHQPIA
>Mature_100_residues
MDLTPREKDKLLIFTAALLAERRRARGLKLNHPEAVALITAAILEGARDGQSVAQLMSAGQQVLTRADVMDGVAEMIPDI
QVEATFPDGTKLVTVHQPIA

Specific function: Unknown

COG id: COG0831

COG function: function code E; Urea amidohydrolase (urease) gamma subunit

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the urease gamma subunit family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): URE3_METPP (A2SDJ2)

Other databases:

- EMBL:   CP000555
- RefSeq:   YP_001019866.1
- ProteinModelPortal:   A2SDJ2
- SMR:   A2SDJ2
- STRING:   A2SDJ2
- GeneID:   4784409
- GenomeReviews:   CP000555_GR
- KEGG:   mpt:Mpe_A0669
- NMPDR:   fig|279263.3.peg.3233
- eggNOG:   COG0831
- HOGENOM:   HBG286300
- OMA:   YPEAVAY
- BioCyc:   MPET420662:MPE_A0669-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00739
- InterPro:   IPR002026
- InterPro:   IPR012010
- Gene3D:   G3DSA:3.30.280.10
- PIRSF:   PIRSF001223
- ProDom:   PD002319
- TIGRFAMs:   TIGR00193

Pfam domain/function: PF00547 Urease_gamma; SSF54111 Urease_gamma_reg

EC number: =3.5.1.5

Molecular weight: Translated: 10787; Mature: 10787

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLTPREKDKLLIFTAALLAERRRARGLKLNHPEAVALITAAILEGARDGQSVAQLMSAG
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHH
QQVLTRADVMDGVAEMIPDIQVEATFPDGTKLVTVHQPIA
HHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEECCCCC
>Mature Secondary Structure
MDLTPREKDKLLIFTAALLAERRRARGLKLNHPEAVALITAAILEGARDGQSVAQLMSAG
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHH
QQVLTRADVMDGVAEMIPDIQVEATFPDGTKLVTVHQPIA
HHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA