| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is ureG
Identifier: 124265856
GI number: 124265856
Start: 699140
End: 699799
Strand: Reverse
Name: ureG
Synonym: Mpe_A0663
Alternate gene names: 124265856
Gene position: 699799-699140 (Counterclockwise)
Preceding gene: 124265857
Following gene: 124265855
Centisome position: 17.3
GC content: 67.27
Gene sequence:
>660_bases ATGAGCGCATTGCATTCGATCCCCCACCGCAGCAAGAAGCTGCCCCCCCTGCGCGTGGGCGTCGGCGGCCCCGTCGGCTC CGGCAAGACCACGCTGGTGGAGATGCTCTGCAAGAGCATGCGCGAGCGCTGGGACCTGGTGGTCGTGACCAACGACATCT ACACCAAGGAAGACCAGCGCCTGCTCACGGTGTCGGGCGCGCTGGAGCCCGAACGCATCATGGGTGTGGAGACCGGCGGC TGCCCGCACACGGCGATCCGCGAGGATGCGTCGATCAATCTCGAGGCGGTGGACCGCATGCTGGCGAAGTTCCCGAACGC CGACATCGTGTTCATCGAGTCCGGCGGCGACAACCTCGCGGCCACCTTCAGCCCCGAGCTCAGCGACCTGACGATCTACG TGATCGATGTCGCCGCCGGCGAGAAGATCCCGCGCAAGGGCGGCCCCGGCATCACCAAGAGCGACCTGTTCGTCATCAAC AAGACCGATCTTGCGCCGCACGTCGGCGCCGACCTGGCCGTCATGGAGGCCGACACGCAGCGCATGCGGCCGGCCCATGC GAGTTCGCGGCCCTACGTGATGACCAACCTGAAGACCCGCGCTGGCCTGGCCGAGGTGGTGAGCTTCATCGAGCGTCGCG GACTGCTGCACGCGGCCTGA
Upstream 100 bases:
>100_bases CTGTCGGCCCGCCACGAGACACAGTACTCGCGGCTGTTCCGCTCCTGAGCGAGCGGGGCCACGGCGTGGCCGGTGGCGCG CTTCGTGCATCATCACCGCC
Downstream 100 bases:
>100_bases GCCCCCTGCCCCGCGGGGGTAGGCGGTCTTTCATCGGCGCCGGGTCGCGGTGGGTTTAGAGTCGGCACTCCCCCTTCTCT ATCCACCACGAAAGGACAAC
Product: urease accessory protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 219; Mature: 218
Protein sequence:
>219_residues MSALHSIPHRSKKLPPLRVGVGGPVGSGKTTLVEMLCKSMRERWDLVVVTNDIYTKEDQRLLTVSGALEPERIMGVETGG CPHTAIREDASINLEAVDRMLAKFPNADIVFIESGGDNLAATFSPELSDLTIYVIDVAAGEKIPRKGGPGITKSDLFVIN KTDLAPHVGADLAVMEADTQRMRPAHASSRPYVMTNLKTRAGLAEVVSFIERRGLLHAA
Sequences:
>Translated_219_residues MSALHSIPHRSKKLPPLRVGVGGPVGSGKTTLVEMLCKSMRERWDLVVVTNDIYTKEDQRLLTVSGALEPERIMGVETGG CPHTAIREDASINLEAVDRMLAKFPNADIVFIESGGDNLAATFSPELSDLTIYVIDVAAGEKIPRKGGPGITKSDLFVIN KTDLAPHVGADLAVMEADTQRMRPAHASSRPYVMTNLKTRAGLAEVVSFIERRGLLHAA >Mature_218_residues SALHSIPHRSKKLPPLRVGVGGPVGSGKTTLVEMLCKSMRERWDLVVVTNDIYTKEDQRLLTVSGALEPERIMGVETGGC PHTAIREDASINLEAVDRMLAKFPNADIVFIESGGDNLAATFSPELSDLTIYVIDVAAGEKIPRKGGPGITKSDLFVINK TDLAPHVGADLAVMEADTQRMRPAHASSRPYVMTNLKTRAGLAEVVSFIERRGLLHAA
Specific function: Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by ureG
COG id: COG0378
COG function: function code OK; Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ureG family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): UREG_METPP (A2SDI6)
Other databases:
- EMBL: CP000555 - RefSeq: YP_001019860.1 - ProteinModelPortal: A2SDI6 - SMR: A2SDI6 - STRING: A2SDI6 - GeneID: 4784790 - GenomeReviews: CP000555_GR - KEGG: mpt:Mpe_A0663 - NMPDR: fig|279263.3.peg.3227 - eggNOG: COG0378 - HOGENOM: HBG364734 - OMA: LCKAMRE - ProtClustDB: CLSK2321823 - BioCyc: MPET420662:MPE_A0663-MONOMER - GO: GO:0005737 - HAMAP: MF_01389 - InterPro: IPR003495 - InterPro: IPR012202 - InterPro: IPR004400 - PIRSF: PIRSF005624 - TIGRFAMs: TIGR00101
Pfam domain/function: PF02492 cobW
EC number: NA
Molecular weight: Translated: 23654; Mature: 23522
Theoretical pI: Translated: 7.15; Mature: 7.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSALHSIPHRSKKLPPLRVGVGGPVGSGKTTLVEMLCKSMRERWDLVVVTNDIYTKEDQR CCCHHHCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCEECCCCCE LLTVSGALEPERIMGVETGGCPHTAIREDASINLEAVDRMLAKFPNADIVFIESGGDNLA EEEEECCCCHHHEEEECCCCCCCHHHCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCEE ATFSPELSDLTIYVIDVAAGEKIPRKGGPGITKSDLFVINKTDLAPHVGADLAVMEADTQ EEECCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEECCHH RMRPAHASSRPYVMTNLKTRAGLAEVVSFIERRGLLHAA HCCCCCCCCCCEEEECCCHHCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure SALHSIPHRSKKLPPLRVGVGGPVGSGKTTLVEMLCKSMRERWDLVVVTNDIYTKEDQR CCHHHCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCEECCCCCE LLTVSGALEPERIMGVETGGCPHTAIREDASINLEAVDRMLAKFPNADIVFIESGGDNLA EEEEECCCCHHHEEEECCCCCCCHHHCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCEE ATFSPELSDLTIYVIDVAAGEKIPRKGGPGITKSDLFVINKTDLAPHVGADLAVMEADTQ EEECCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEECCHH RMRPAHASSRPYVMTNLKTRAGLAEVVSFIERRGLLHAA HCCCCCCCCCCEEEECCCHHCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA