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The map label for this gene is ygaU [H]

Identifier: 124265855

GI number: 124265855

Start: 698533

End: 699090

Strand: Reverse

Name: ygaU [H]

Synonym: Mpe_A0662

Alternate gene names: 124265855

Gene position: 699090-698533 (Counterclockwise)

Preceding gene: 124265856

Following gene: 124265849

Centisome position: 17.29

GC content: 64.7

Gene sequence:

>558_bases
GTGGGTTTAGAGTCGGCACTCCCCCTTCTCTATCCACCACGAAAGGACAACGCCATGGGCCTGATGAGTTTCATCAAGGA
AGCCGGAGAAAAGCTGTTCGGCAAGGGCGAGGCCAAGGCAGCGCAGGAGGCCGCAAAGCAGGCCCCCAGTCCCGAGAACC
TGGAGCGGCTGAACAAGGCTGCCGGCGACGCCATCGTGAGCTACATCCAGGCGCAGGGCCTGAAGGTCGACGGCCTGGCT
GTCGGCTTCGACGGTGCCAGCGCGACGGTCACGGTCTCGGGCGAGGCCCCCGACCAGGCCACCAAGGAGAAAGTGCTGCT
GTGCTGCGGCAACGTCGAGAACGTGGTGGCGGTGAACGACCGGCTCACGGTGGCGACGCCCACGCCCGAGGCGCAGTACT
ACACCGTGGTGAAGGGCGACAACCTGTCGAAGATCTCGAAGCAGTTCTACGGCACGCCGAACAAGTACCCGGTGATCTTC
GAGGCCAACAAGCCGATGCTGACGCACCCGGACAAGATCTACCCGGGCCAGGTGCTGCGCATCCCGCCGCAGCCCTGA

Upstream 100 bases:

>100_bases
GCCGAGGTGGTGAGCTTCATCGAGCGTCGCGGACTGCTGCACGCGGCCTGAGCCCCCTGCCCCGCGGGGGTAGGCGGTCT
TTCATCGGCGCCGGGTCGCG

Downstream 100 bases:

>100_bases
ATCCGGCGCGCGCCCGGCGTCACCGCGCGAGCGTCGCGGCCCGGTCCTGCAGCCACGCCGCCGTCACGGCGGCGCCGGCG
GGCCGGGCGAACAGGTAGCC

Product: putative cell wall turnover protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 184

Protein sequence:

>185_residues
MGLESALPLLYPPRKDNAMGLMSFIKEAGEKLFGKGEAKAAQEAAKQAPSPENLERLNKAAGDAIVSYIQAQGLKVDGLA
VGFDGASATVTVSGEAPDQATKEKVLLCCGNVENVVAVNDRLTVATPTPEAQYYTVVKGDNLSKISKQFYGTPNKYPVIF
EANKPMLTHPDKIYPGQVLRIPPQP

Sequences:

>Translated_185_residues
MGLESALPLLYPPRKDNAMGLMSFIKEAGEKLFGKGEAKAAQEAAKQAPSPENLERLNKAAGDAIVSYIQAQGLKVDGLA
VGFDGASATVTVSGEAPDQATKEKVLLCCGNVENVVAVNDRLTVATPTPEAQYYTVVKGDNLSKISKQFYGTPNKYPVIF
EANKPMLTHPDKIYPGQVLRIPPQP
>Mature_184_residues
GLESALPLLYPPRKDNAMGLMSFIKEAGEKLFGKGEAKAAQEAAKQAPSPENLERLNKAAGDAIVSYIQAQGLKVDGLAV
GFDGASATVTVSGEAPDQATKEKVLLCCGNVENVVAVNDRLTVATPTPEAQYYTVVKGDNLSKISKQFYGTPNKYPVIFE
ANKPMLTHPDKIYPGQVLRIPPQP

Specific function: Unknown

COG id: COG1652

COG function: function code S; Uncharacterized protein containing LysM domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Escherichia coli, GI1789019, Length=166, Percent_Identity=44.578313253012, Blast_Score=128, Evalue=2e-31,

Paralogues:

None

Copy number: 4340 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018392
- InterPro:   IPR002482
- InterPro:   IPR007055
- InterPro:   IPR014004 [H]

Pfam domain/function: PF04972 BON; PF01476 LysM [H]

EC number: NA

Molecular weight: Translated: 19760; Mature: 19629

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLESALPLLYPPRKDNAMGLMSFIKEAGEKLFGKGEAKAAQEAAKQAPSPENLERLNKA
CCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHH
AGDAIVSYIQAQGLKVDGLAVGFDGASATVTVSGEAPDQATKEKVLLCCGNVENVVAVND
HHHHHHHHHHHCCCEECCEEEEECCCCEEEEEECCCCCCCCCCEEEEEECCCCCEEEECC
RLTVATPTPEAQYYTVVKGDNLSKISKQFYGTPNKYPVIFEANKPMLTHPDKIYPGQVLR
EEEEECCCCCCEEEEEEECCCHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCEEE
IPPQP
CCCCC
>Mature Secondary Structure 
GLESALPLLYPPRKDNAMGLMSFIKEAGEKLFGKGEAKAAQEAAKQAPSPENLERLNKA
CCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHH
AGDAIVSYIQAQGLKVDGLAVGFDGASATVTVSGEAPDQATKEKVLLCCGNVENVVAVND
HHHHHHHHHHHCCCEECCEEEEECCCCEEEEEECCCCCCCCCCEEEEEECCCCCEEEECC
RLTVATPTPEAQYYTVVKGDNLSKISKQFYGTPNKYPVIFEANKPMLTHPDKIYPGQVLR
EEEEECCCCCCEEEEEEECCCHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCEEE
IPPQP
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]