| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is 124265608
Identifier: 124265608
GI number: 124265608
Start: 448187
End: 448753
Strand: Reverse
Name: 124265608
Synonym: Mpe_A0415
Alternate gene names: NA
Gene position: 448753-448187 (Counterclockwise)
Preceding gene: 124265609
Following gene: 124265607
Centisome position: 11.1
GC content: 73.72
Gene sequence:
>567_bases GTGAACGCGATTCCCCTGACCTCGGGCGTCCTGCCACGCCGGCGCGTCCTGGTGGCCGGCCTCGCAAGCCTCGCGACCGG CGGGTTGGCCGGCTGCGCGCCCGGCCGCATCGAGCGCTTCGCGACCTGGGCCGAAGCACGCAACGCGGTCTTCGCGCTGG CGCAGCCGGGTTCACGCTGGCGCAGCAACGGCCACTGGTCGCTGAGCCAGGCCCTGCAGCACCTCGCGCAGAGCGTCGAG GGCTCGCTGGCCGGCTATCCACGCCTGAAGCCGGCCTGGTTCACGCACACCGTCGGCGCCGCGGCGCATGCGGTGTTCGA AGCGCGCGGCCGGATGACGCACCCGCTCGACGAGCCCCTCCCCGGTGCTGCGCCGCTCGATGCGGCGTTGCCGCCCGACG CCGCGGCGCTCCGCCTGTTGCGCGCGATGGATGCGTTCGAGGCGCACGATGGCACGCTGGCGCCGCACTTCGCCTACGGT GTGCTCGACAAGCCGGCCTACGCCCGCGCCCACCAGATGCACCTGGCCGCACACTGGCAGCAGTTCGAGGAAACCCGGCT CGCCTGA
Upstream 100 bases:
>100_bases GCACGCGCTGCAACGCCACAACCTGAAGTACGGCATGGTGACGATGTGCGTCGGCATGGGCCAGGGGGCGGCGGGCATCC TTGAACGCGTCTGACGCGCG
Downstream 100 bases:
>100_bases GGCGCCGCACCGGATCGACACCCCTCGCCCTCGCACAACCCCTCGGAGCCCCGACATGAGCCACGACGACCTCCTGAGCC ACGCCGAAGCCGGCGTGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: Lipoprotein
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MNAIPLTSGVLPRRRVLVAGLASLATGGLAGCAPGRIERFATWAEARNAVFALAQPGSRWRSNGHWSLSQALQHLAQSVE GSLAGYPRLKPAWFTHTVGAAAHAVFEARGRMTHPLDEPLPGAAPLDAALPPDAAALRLLRAMDAFEAHDGTLAPHFAYG VLDKPAYARAHQMHLAAHWQQFEETRLA
Sequences:
>Translated_188_residues MNAIPLTSGVLPRRRVLVAGLASLATGGLAGCAPGRIERFATWAEARNAVFALAQPGSRWRSNGHWSLSQALQHLAQSVE GSLAGYPRLKPAWFTHTVGAAAHAVFEARGRMTHPLDEPLPGAAPLDAALPPDAAALRLLRAMDAFEAHDGTLAPHFAYG VLDKPAYARAHQMHLAAHWQQFEETRLA >Mature_188_residues MNAIPLTSGVLPRRRVLVAGLASLATGGLAGCAPGRIERFATWAEARNAVFALAQPGSRWRSNGHWSLSQALQHLAQSVE GSLAGYPRLKPAWFTHTVGAAAHAVFEARGRMTHPLDEPLPGAAPLDAALPPDAAALRLLRAMDAFEAHDGTLAPHFAYG VLDKPAYARAHQMHLAAHWQQFEETRLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20145; Mature: 20145
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAIPLTSGVLPRRRVLVAGLASLATGGLAGCAPGRIERFATWAEARNAVFALAQPGSRW CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCHHH RSNGHWSLSQALQHLAQSVEGSLAGYPRLKPAWFTHTVGAAAHAVFEARGRMTHPLDEPL CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC PGAAPLDAALPPDAAALRLLRAMDAFEAHDGTLAPHFAYGVLDKPAYARAHQMHLAAHWQ CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHH QFEETRLA HHHHHCCC >Mature Secondary Structure MNAIPLTSGVLPRRRVLVAGLASLATGGLAGCAPGRIERFATWAEARNAVFALAQPGSRW CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCHHH RSNGHWSLSQALQHLAQSVEGSLAGYPRLKPAWFTHTVGAAAHAVFEARGRMTHPLDEPL CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC PGAAPLDAALPPDAAALRLLRAMDAFEAHDGTLAPHFAYGVLDKPAYARAHQMHLAAHWQ CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHH QFEETRLA HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA