| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is 124265244
Identifier: 124265244
GI number: 124265244
Start: 48537
End: 49634
Strand: Direct
Name: 124265244
Synonym: Mpe_A0051
Alternate gene names: NA
Gene position: 48537-49634 (Clockwise)
Preceding gene: 124265243
Following gene: 124265245
Centisome position: 1.2
GC content: 71.49
Gene sequence:
>1098_bases ATGAAGAAGGCCGTGCCGGCGGGTCGGCGCCGCTATCCTGGGGTTCCCGTGGCCGGACTGTGCCGAGTGACCTCTCCTGA ACTGGCCGAACTCGCCGAACTGCAGCGCATCGTCGAGCAAGGCGGCGCGCACCTGCAGCAGCGCGTGGTGTGCGAGGTGA GCGTCGGCGACGGCCTCTGTCTGCCGGTCCACGCCATCACGCTGGGCAATCCCGATCCGGCGCTGCCGGCGGTCGGTTTC TTCGGCGGCGTGCACGGGCTGGAGCGGATCGGCGCCGAGGTGGTGCTGGCCTGCCTGCGCAGCGTGGTGAACCGCCTGTC GTGGGACGTGCTGCTGCACCGCCAGCTCGACATGTTGCGCCTGGTGTTCATGCCGCTGGTCAACCCCGGTGGGCTGTGGC GCGGCACGCGCGCCAACCCGCAAGGCGTGGACCTGATGCGCAATGCACCGGTCGACGCCGACGACCGCGCGCCCTTCCTG GTGGGCGGCCAGCGGCTCAGCGCCGGCCTGCCGTGGTACCGCGGCGCGCTGGGCGCCGCGATGGAGGCCGAGAGCCAGGC GCTGTGCTGCGTGGTGCAGGAGGAGCTGCTGACGCGGCGCTTCAGCGTCGCGGTCGACTGCCACTCGGGCTTCGGCCTGC ACGACCGCATCTGGTTTCCCTACGCCCACACGGCGCGGCCGATCCCGCACCTGGCGGAGATGCATGCGCTGAACGCCCTG CTCGACCAGGCGCACACCCACCACCGCTACGTGTTCGAGCCGCAGAGCCGTCAGTACCTGGCGCACGGCGACCTGTGGGA CCACCTCTATCTGCGCGCCAGCGAGCAGCATTCCGAGCGTGTGTTCCTGCCGCTGACGCTGGAGATGGGCTCGTGGCTGT GGGTGAAGAAGAACCCGCGCCAGCTGTTCACGCGCCACGGCCTGTTCAACCCGCTGATCCAGCACCGCCAGCAGCGCGTG CTGCGGCGGCACGTGGCCTGGCTGGATTTCATCGCCCGCGCCGCCTGCGGCCATGCCGCCTGGCTGCCGCAGGGCACGGC GCGCGAGCAGCACCAGGAGCAGGCGCTGGCGCGCTGGTACCGGGGGGTGCGGCGGTGA
Upstream 100 bases:
>100_bases CTCCCTGCATTGCGCCGGACCTGGAACAGGCCCGTGCCGACGCACGCTAGCGGCGGCCTATGACACCTTGATGGCGGTGC GGTGAAACCCGCCGCGGCGC
Downstream 100 bases:
>100_bases GCACGGGCGTGCGATCTGCGGCGGACGACGCCGAGCCCTGGGTGCTGCTGCGCGGCCTGACGCGCGAGGCGCGGCACTGG GGCGACTTCGCGGCGCAGTT
Product: putative carboxypeptidase
Products: NA
Alternate protein names: Carboxypeptidase; Peptidase; Zinc Carboxypeptidase; Metalloproteinase; Zinc Carboxypeptidase-Like Protein; Carboxypeptidase A
Number of amino acids: Translated: 365; Mature: 365
Protein sequence:
>365_residues MKKAVPAGRRRYPGVPVAGLCRVTSPELAELAELQRIVEQGGAHLQQRVVCEVSVGDGLCLPVHAITLGNPDPALPAVGF FGGVHGLERIGAEVVLACLRSVVNRLSWDVLLHRQLDMLRLVFMPLVNPGGLWRGTRANPQGVDLMRNAPVDADDRAPFL VGGQRLSAGLPWYRGALGAAMEAESQALCCVVQEELLTRRFSVAVDCHSGFGLHDRIWFPYAHTARPIPHLAEMHALNAL LDQAHTHHRYVFEPQSRQYLAHGDLWDHLYLRASEQHSERVFLPLTLEMGSWLWVKKNPRQLFTRHGLFNPLIQHRQQRV LRRHVAWLDFIARAACGHAAWLPQGTAREQHQEQALARWYRGVRR
Sequences:
>Translated_365_residues MKKAVPAGRRRYPGVPVAGLCRVTSPELAELAELQRIVEQGGAHLQQRVVCEVSVGDGLCLPVHAITLGNPDPALPAVGF FGGVHGLERIGAEVVLACLRSVVNRLSWDVLLHRQLDMLRLVFMPLVNPGGLWRGTRANPQGVDLMRNAPVDADDRAPFL VGGQRLSAGLPWYRGALGAAMEAESQALCCVVQEELLTRRFSVAVDCHSGFGLHDRIWFPYAHTARPIPHLAEMHALNAL LDQAHTHHRYVFEPQSRQYLAHGDLWDHLYLRASEQHSERVFLPLTLEMGSWLWVKKNPRQLFTRHGLFNPLIQHRQQRV LRRHVAWLDFIARAACGHAAWLPQGTAREQHQEQALARWYRGVRR >Mature_365_residues MKKAVPAGRRRYPGVPVAGLCRVTSPELAELAELQRIVEQGGAHLQQRVVCEVSVGDGLCLPVHAITLGNPDPALPAVGF FGGVHGLERIGAEVVLACLRSVVNRLSWDVLLHRQLDMLRLVFMPLVNPGGLWRGTRANPQGVDLMRNAPVDADDRAPFL VGGQRLSAGLPWYRGALGAAMEAESQALCCVVQEELLTRRFSVAVDCHSGFGLHDRIWFPYAHTARPIPHLAEMHALNAL LDQAHTHHRYVFEPQSRQYLAHGDLWDHLYLRASEQHSERVFLPLTLEMGSWLWVKKNPRQLFTRHGLFNPLIQHRQQRV LRRHVAWLDFIARAACGHAAWLPQGTAREQHQEQALARWYRGVRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41077; Mature: 41077
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKAVPAGRRRYPGVPVAGLCRVTSPELAELAELQRIVEQGGAHLQQRVVCEVSVGDGLC CCCCCCCCCCCCCCCCHHHHEECCCHHHHHHHHHHHHHHHCCHHHHHHEEEEEECCCCCE LPVHAITLGNPDPALPAVGFFGGVHGLERIGAEVVLACLRSVVNRLSWDVLLHRQLDMLR EEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVFMPLVNPGGLWRGTRANPQGVDLMRNAPVDADDRAPFLVGGQRLSAGLPWYRGALGAA HHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCEEECCCHHHCCCCHHHHHHHHH MEAESQALCCVVQEELLTRRFSVAVDCHSGFGLHDRIWFPYAHTARPIPHLAEMHALNAL HHHCCHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHH LDQAHTHHRYVFEPQSRQYLAHGDLWDHLYLRASEQHSERVFLPLTLEMGSWLWVKKNPR HHHHHHCCEEEECCCCCCEEECCCHHHHHHEECCCCCCCEEEEEEEECCCCEEEEECCHH QLFTRHGLFNPLIQHRQQRVLRRHVAWLDFIARAACGHAAWLPQGTAREQHQEQALARWY HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHH RGVRR HHHCC >Mature Secondary Structure MKKAVPAGRRRYPGVPVAGLCRVTSPELAELAELQRIVEQGGAHLQQRVVCEVSVGDGLC CCCCCCCCCCCCCCCCHHHHEECCCHHHHHHHHHHHHHHHCCHHHHHHEEEEEECCCCCE LPVHAITLGNPDPALPAVGFFGGVHGLERIGAEVVLACLRSVVNRLSWDVLLHRQLDMLR EEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVFMPLVNPGGLWRGTRANPQGVDLMRNAPVDADDRAPFLVGGQRLSAGLPWYRGALGAA HHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCEEECCCHHHCCCCHHHHHHHHH MEAESQALCCVVQEELLTRRFSVAVDCHSGFGLHDRIWFPYAHTARPIPHLAEMHALNAL HHHCCHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHH LDQAHTHHRYVFEPQSRQYLAHGDLWDHLYLRASEQHSERVFLPLTLEMGSWLWVKKNPR HHHHHHCCEEEECCCCCCEEECCCHHHHHHEECCCCCCCEEEEEEEECCCCEEEEECCHH QLFTRHGLFNPLIQHRQQRVLRRHVAWLDFIARAACGHAAWLPQGTAREQHQEQALARWY HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHH RGVRR HHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA