| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is 124265245
Identifier: 124265245
GI number: 124265245
Start: 49631
End: 50422
Strand: Direct
Name: 124265245
Synonym: Mpe_A0052
Alternate gene names: NA
Gene position: 49631-50422 (Clockwise)
Preceding gene: 124265244
Following gene: 124265246
Centisome position: 1.23
GC content: 75.38
Gene sequence:
>792_bases GTGAGCACGGGCGTGCGATCTGCGGCGGACGACGCCGAGCCCTGGGTGCTGCTGCGCGGCCTGACGCGCGAGGCGCGGCA CTGGGGCGACTTCGCGGCGCAGTTGCGCGCGCTGCAGCCCGGCGCGCCGGTCATCGCGCTCGACCTGCCGGGCAACGGTG CGCTGCACGCGCAGCGCAGCCCGGCCAGCGTGCCGGCGATGGCGGCGCACTGCCGCACTGCGCTGCAGGCCCTGGGCGTG GCGCCGCCCTACCGCGTGCTGGCGATGTCGCTCGGCGCGATGGTGGCGCTGGCCTGGGCCCACGCCCAGCCGCGCGAGCT GGCCGCTGCGGTGCTGATCAACACCAGCCTGCGGCCCTTCGGCGCCTTTCATCAGCGGCTGCGGCCGTCGCAGTACGCGA CGCTGCTGCGGCTGGCGCTGAGCGACGCCGATGCGGCCGAATGGGAGCGCAGCATCCTGGCAATGACCAGCCGGCGCTGC TTCGAAGAGGCGGAACGCGACGCGCTGCTGGGCGTGTGGACGGCGTGGCGGCGCGAATGTCCGGTGTCGCGCGCCAATGC GCTGCGGCAGTTGCTCGCCGCAGCACGCTTTCGCGCGCCGCAGCCGCGCCCTCCGGTGCCGCTGCTGGTGCTGGCGAGCA CGCGGGACGCGCTGGTCGATCCGCAGTGCTCGCGCCGGCTGGCGCAGGCGTGGGCGCTGCCGATCGCCGAGCACCCGACC GCGGGCCACGACCTGCCGCTCGACGACGGCGCGTGGGTCGCCCGGCAGATCGAGCGTTTCGTGTGCATCTAG
Upstream 100 bases:
>100_bases CCCGCGCCGCCTGCGGCCATGCCGCCTGGCTGCCGCAGGGCACGGCGCGCGAGCAGCACCAGGAGCAGGCGCTGGCGCGC TGGTACCGGGGGGTGCGGCG
Downstream 100 bases:
>100_bases AAAGGCTCTTGGCGGCGCAGTCCGGTGCGTGTCCGACAGCGACGCGGCGTGCCGTCTCACAACGCCTTGCGTCATTTGCT GCAGTGGGCGCGCCGCTTGC
Product: hydrolase or acyltransferase-like protein
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold; Alpha/Beta Hydrolase Fold Protein; Hydrolase; Alpha/Beta Fold Superfamily Hydrolase; Hydrolase Or Acyltransferase-Like Protein; Hydrolase Alpha/Beta Fold Family; Alpha/Beta Family Hydrolase; Alpha/Beta Superfamily Hydrolase
Number of amino acids: Translated: 263; Mature: 262
Protein sequence:
>263_residues MSTGVRSAADDAEPWVLLRGLTREARHWGDFAAQLRALQPGAPVIALDLPGNGALHAQRSPASVPAMAAHCRTALQALGV APPYRVLAMSLGAMVALAWAHAQPRELAAAVLINTSLRPFGAFHQRLRPSQYATLLRLALSDADAAEWERSILAMTSRRC FEEAERDALLGVWTAWRRECPVSRANALRQLLAAARFRAPQPRPPVPLLVLASTRDALVDPQCSRRLAQAWALPIAEHPT AGHDLPLDDGAWVARQIERFVCI
Sequences:
>Translated_263_residues MSTGVRSAADDAEPWVLLRGLTREARHWGDFAAQLRALQPGAPVIALDLPGNGALHAQRSPASVPAMAAHCRTALQALGV APPYRVLAMSLGAMVALAWAHAQPRELAAAVLINTSLRPFGAFHQRLRPSQYATLLRLALSDADAAEWERSILAMTSRRC FEEAERDALLGVWTAWRRECPVSRANALRQLLAAARFRAPQPRPPVPLLVLASTRDALVDPQCSRRLAQAWALPIAEHPT AGHDLPLDDGAWVARQIERFVCI >Mature_262_residues STGVRSAADDAEPWVLLRGLTREARHWGDFAAQLRALQPGAPVIALDLPGNGALHAQRSPASVPAMAAHCRTALQALGVA PPYRVLAMSLGAMVALAWAHAQPRELAAAVLINTSLRPFGAFHQRLRPSQYATLLRLALSDADAAEWERSILAMTSRRCF EEAERDALLGVWTAWRRECPVSRANALRQLLAAARFRAPQPRPPVPLLVLASTRDALVDPQCSRRLAQAWALPIAEHPTA GHDLPLDDGAWVARQIERFVCI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28648; Mature: 28517
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTGVRSAADDAEPWVLLRGLTREARHWGDFAAQLRALQPGAPVIALDLPGNGALHAQRS CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEECCCC PASVPAMAAHCRTALQALGVAPPYRVLAMSLGAMVALAWAHAQPRELAAAVLINTSLRPF CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHH GAFHQRLRPSQYATLLRLALSDADAAEWERSILAMTSRRCFEEAERDALLGVWTAWRREC HHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PVSRANALRQLLAAARFRAPQPRPPVPLLVLASTRDALVDPQCSRRLAQAWALPIAEHPT CCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHCCHHHHHHHHHHHHCCCCCCCC AGHDLPLDDGAWVARQIERFVCI CCCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure STGVRSAADDAEPWVLLRGLTREARHWGDFAAQLRALQPGAPVIALDLPGNGALHAQRS CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEECCCC PASVPAMAAHCRTALQALGVAPPYRVLAMSLGAMVALAWAHAQPRELAAAVLINTSLRPF CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHH GAFHQRLRPSQYATLLRLALSDADAAEWERSILAMTSRRCFEEAERDALLGVWTAWRREC HHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PVSRANALRQLLAAARFRAPQPRPPVPLLVLASTRDALVDPQCSRRLAQAWALPIAEHPT CCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHCCHHHHHHHHHHHHCCCCCCCC AGHDLPLDDGAWVARQIERFVCI CCCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA