| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is folC [H]
Identifier: 124023685
GI number: 124023685
Start: 1745460
End: 1746701
Strand: Direct
Name: folC [H]
Synonym: P9303_19851
Alternate gene names: 124023685
Gene position: 1745460-1746701 (Clockwise)
Preceding gene: 124023684
Following gene: 124023686
Centisome position: 65.06
GC content: 56.28
Gene sequence:
>1242_bases GTGGCCAAACCCACAAGTCCAAGCAAGGAAGATTTAAGCGATCTGATTCCTCGTTTTGATCAGCGGGGGATGGATCTTGG CCTTGAGCGCATGCAACAAGCACTGCAGGCCATGGGAAACCCCTGTGCCTCTATTCCAGCCATTCAGGTCGTAGGGACCA ATGGCAAAGGGTCTATCGCCAGCTTCATTGCCAGCAGCCTTAAGGCTGCTGGCATTCGCGTGGGGCTGACCACCTCTCCT CACCTCGTGAGCTGGTGTGAACGGATCAGCAGCGATGGTGAGCTGATCTCAATCGTTGAGCTACGCCAACGACTCACAGC CCTGCAAGCCCTTGCCCAAACCCACCGACTCACCCCCTTCGAGCTGTTGATGGCCACGGCTTTTGATCACTTCAGATCCC GCGAGGTAGAGCTGCTTGTGCTTGAGGTGGGCCTCGGAGGACGCCTCGATGCCACCACAGCTCATCCATGCAGACCAATC ATTGCCATGGCCAACATCGGCCTCGACCACTGCGAACACCTTGGTTACAGCCTTAAAGAGATAACAGCAGAAAAAAGTGC CGTCATCAGTCCTGGGGCTGCTGTCATCAGTGCTCGTCAACAAGCTGAAGTGGCGAGCATTCTTGAAGACAAGGCAAAAC ATCAACAGGCCCGCTTGCAATGGGTTTCACCCCTCCCAGATGACTGGACCTTGGGCTTGCCAGGAGTCCTTCAGCGGCAG AACGCGGCGGTAGCCAAGGGTGCTCTTGAATCCCTGGTCCCACTTGGCTGGCGGCTTAATGAAGACGTCATTCGCACAGG GCTGGCCCACGCCTACTGGCCTGCACGGCTGCAGACCGTTCACTGGCAAAGCCAGCCAGTGCTCATTGATGGTGCCCATA ACCCACCAGCCACCGAACGGTTGGCCCACGAGCGGCAGCAGTGGAGCAATCAAGAGTTTGGGGTTTGCTGGGTGCTTGGT CTACAGGCCCACAAGCAAGCACCAGCCATGCTTCGCCATTTACTCAAGCCAAGCGATCTGGCTTGGATCGTGCCGGTGCC GGAACACTGCAGCTGGACGCAGCACCAGCTCGCAGCACACTGCCCGGACCTATCAAGCCAACTCCAATCTGCTGACAATG TTGAACAGGTCTTCTCCATCCTGCTCAAACAGAATCGATGGCCAAATCCTCCTCCAGTTGTAGCTGGTTCCCTCTATTTA TTAGGTGATCTTCTCGCAAAGCAAACCATCAAGGCAGAGTGA
Upstream 100 bases:
>100_bases CCCAAAGGTTGTGCGGATGGTGCCGCCGCTGATCATCAAACCAAGCGAAATCCGCCAACTGCTCCAACGTCTGGAAGCCA CCCTGGCGCACTTCCGCTAA
Downstream 100 bases:
>100_bases GAGGTGTTGCCGTAAAGCCGATGCCGAGCTCGTTGTCGCAACGTCAAAGCCTGATGACGTTTCTGGGCTGGATGCTATGC CTGCTGATCGCTATCCCTGC
Product: bifunctional dihydrofolate/folylpolyglutamate synthase
Products: NA
Alternate protein names: Folylpoly-gamma-glutamate synthetase; FPGS; Tetrahydrofolate synthase; Tetrahydrofolylpolyglutamate synthase [H]
Number of amino acids: Translated: 413; Mature: 412
Protein sequence:
>413_residues MAKPTSPSKEDLSDLIPRFDQRGMDLGLERMQQALQAMGNPCASIPAIQVVGTNGKGSIASFIASSLKAAGIRVGLTTSP HLVSWCERISSDGELISIVELRQRLTALQALAQTHRLTPFELLMATAFDHFRSREVELLVLEVGLGGRLDATTAHPCRPI IAMANIGLDHCEHLGYSLKEITAEKSAVISPGAAVISARQQAEVASILEDKAKHQQARLQWVSPLPDDWTLGLPGVLQRQ NAAVAKGALESLVPLGWRLNEDVIRTGLAHAYWPARLQTVHWQSQPVLIDGAHNPPATERLAHERQQWSNQEFGVCWVLG LQAHKQAPAMLRHLLKPSDLAWIVPVPEHCSWTQHQLAAHCPDLSSQLQSADNVEQVFSILLKQNRWPNPPPVVAGSLYL LGDLLAKQTIKAE
Sequences:
>Translated_413_residues MAKPTSPSKEDLSDLIPRFDQRGMDLGLERMQQALQAMGNPCASIPAIQVVGTNGKGSIASFIASSLKAAGIRVGLTTSP HLVSWCERISSDGELISIVELRQRLTALQALAQTHRLTPFELLMATAFDHFRSREVELLVLEVGLGGRLDATTAHPCRPI IAMANIGLDHCEHLGYSLKEITAEKSAVISPGAAVISARQQAEVASILEDKAKHQQARLQWVSPLPDDWTLGLPGVLQRQ NAAVAKGALESLVPLGWRLNEDVIRTGLAHAYWPARLQTVHWQSQPVLIDGAHNPPATERLAHERQQWSNQEFGVCWVLG LQAHKQAPAMLRHLLKPSDLAWIVPVPEHCSWTQHQLAAHCPDLSSQLQSADNVEQVFSILLKQNRWPNPPPVVAGSLYL LGDLLAKQTIKAE >Mature_412_residues AKPTSPSKEDLSDLIPRFDQRGMDLGLERMQQALQAMGNPCASIPAIQVVGTNGKGSIASFIASSLKAAGIRVGLTTSPH LVSWCERISSDGELISIVELRQRLTALQALAQTHRLTPFELLMATAFDHFRSREVELLVLEVGLGGRLDATTAHPCRPII AMANIGLDHCEHLGYSLKEITAEKSAVISPGAAVISARQQAEVASILEDKAKHQQARLQWVSPLPDDWTLGLPGVLQRQN AAVAKGALESLVPLGWRLNEDVIRTGLAHAYWPARLQTVHWQSQPVLIDGAHNPPATERLAHERQQWSNQEFGVCWVLGL QAHKQAPAMLRHLLKPSDLAWIVPVPEHCSWTQHQLAAHCPDLSSQLQSADNVEQVFSILLKQNRWPNPPPVVAGSLYLL GDLLAKQTIKAE
Specific function: Conversion of folates to polyglutamate derivatives. It preferes 5,10-methylenetetrahydrofolate, rather than 10- formyltetrahydrofolate as folate substrate [H]
COG id: COG0285
COG function: function code H; Folylpolyglutamate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the folylpolyglutamate synthase family [H]
Homologues:
Organism=Homo sapiens, GI66932984, Length=380, Percent_Identity=27.1052631578947, Blast_Score=105, Evalue=8e-23, Organism=Homo sapiens, GI66932990, Length=380, Percent_Identity=27.1052631578947, Blast_Score=105, Evalue=8e-23, Organism=Escherichia coli, GI1788654, Length=379, Percent_Identity=30.0791556728232, Blast_Score=119, Evalue=3e-28, Organism=Caenorhabditis elegans, GI71984923, Length=331, Percent_Identity=26.8882175226586, Blast_Score=97, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17553150, Length=331, Percent_Identity=26.8882175226586, Blast_Score=97, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17553148, Length=331, Percent_Identity=26.8882175226586, Blast_Score=97, Evalue=1e-20, Organism=Saccharomyces cerevisiae, GI6323760, Length=423, Percent_Identity=30.4964539007092, Blast_Score=170, Evalue=4e-43, Organism=Saccharomyces cerevisiae, GI6324815, Length=277, Percent_Identity=29.2418772563177, Blast_Score=100, Evalue=6e-22, Organism=Drosophila melanogaster, GI24641571, Length=274, Percent_Identity=28.8321167883212, Blast_Score=110, Evalue=1e-24, Organism=Drosophila melanogaster, GI24581568, Length=191, Percent_Identity=32.4607329842932, Blast_Score=101, Evalue=9e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018109 - InterPro: IPR001645 - InterPro: IPR004101 - InterPro: IPR013221 [H]
Pfam domain/function: PF02875 Mur_ligase_C; PF08245 Mur_ligase_M [H]
EC number: =6.3.2.17 [H]
Molecular weight: Translated: 45218; Mature: 45087
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKPTSPSKEDLSDLIPRFDQRGMDLGLERMQQALQAMGNPCASIPAIQVVGTNGKGSIA CCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHH SFIASSLKAAGIRVGLTTSPHLVSWCERISSDGELISIVELRQRLTALQALAQTHRLTPF HHHHHHHHHCCEEEECCCCHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHCCCHH ELLMATAFDHFRSREVELLVLEVGLGGRLDATTAHPCRPIIAMANIGLDHCEHLGYSLKE HHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHCCHHHHHHCCCHHHH ITAEKSAVISPGAAVISARQQAEVASILEDKAKHQQARLQWVSPLPDDWTLGLPGVLQRQ HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHC NAAVAKGALESLVPLGWRLNEDVIRTGLAHAYWPARLQTVHWQSQPVLIDGAHNPPATER CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHEEEEECCCCEEEECCCCCCHHHH LAHERQQWSNQEFGVCWVLGLQAHKQAPAMLRHLLKPSDLAWIVPVPEHCSWTQHQLAAH HHHHHHHHCCCCCCEEEEEECHHHCCHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHH CPDLSSQLQSADNVEQVFSILLKQNRWPNPPPVVAGSLYLLGDLLAKQTIKAE CCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AKPTSPSKEDLSDLIPRFDQRGMDLGLERMQQALQAMGNPCASIPAIQVVGTNGKGSIA CCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHH SFIASSLKAAGIRVGLTTSPHLVSWCERISSDGELISIVELRQRLTALQALAQTHRLTPF HHHHHHHHHCCEEEECCCCHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHCCCHH ELLMATAFDHFRSREVELLVLEVGLGGRLDATTAHPCRPIIAMANIGLDHCEHLGYSLKE HHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHCCHHHHHHCCCHHHH ITAEKSAVISPGAAVISARQQAEVASILEDKAKHQQARLQWVSPLPDDWTLGLPGVLQRQ HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHC NAAVAKGALESLVPLGWRLNEDVIRTGLAHAYWPARLQTVHWQSQPVLIDGAHNPPATER CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHEEEEECCCCEEEECCCCCCHHHH LAHERQQWSNQEFGVCWVLGLQAHKQAPAMLRHLLKPSDLAWIVPVPEHCSWTQHQLAAH HHHHHHHHCCCCCCEEEEEECHHHCCHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHH CPDLSSQLQSADNVEQVFSILLKQNRWPNPPPVVAGSLYLLGDLLAKQTIKAE CCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8419299; 9384377; 2553669 [H]