| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is hisA
Identifier: 124023446
GI number: 124023446
Start: 1527066
End: 1527833
Strand: Reverse
Name: hisA
Synonym: P9303_17461
Alternate gene names: 124023446
Gene position: 1527833-1527066 (Counterclockwise)
Preceding gene: 124023448
Following gene: 124023445
Centisome position: 56.95
GC content: 55.86
Gene sequence:
>768_bases ATGGAGATCATCCCAGCCATCGACCTACTGGACAGCGCTTGCGTGCGACTTCACCAGGGCGACTACGCGAAGGTGACTCG CTTCAGCGAGGACCCCGTTGCTCAAGCCCTGAGCTGGCAGAAGCAGGGGGCAACTCGCCTACACCTGGTGGATCTCGATG GCGCCAAATCTGGTGAGCCGGTCAACGATTCCTGTGTGCGAGCTATTACCTCTGCCCTCAATATTCCTGTCCAGCTCGGT GGTGGTGTGCGCACTCTCGAACGAGCTGAAGAACTTCTCGCCTACGGCCTTGAACAAGTCATCCTTGGCACCGTGGCAAT AGAGCAACCCCAGCTAGTGAAACAGCTTGCCCAAAGGAATCCCGGTCGGATTATCGTCGGCATCGATGCCAAAAACGGCA AGGTGGCAACGCGAGGATGGATTAGCCAAAGCGAGGTAAATGCAACAGATTTAGCCGCCGATTTCAATGCTGCCGGCATC GCCGCAATCATCAGCACAGACATTGCAACCGATGGAACCCTTGAAGGGCCGAACCTAGAGTCATTACGTGCAATGGCCAA CGCCAGCAGCGTTCCATTAATCGCCTCCGGAGGCGTGGGTTGCATGGCCGATCTACTTAGTCTGCTGGCTCTTGAACCCT ATGGAGTGAGTGGGGTGATTGTGGGAAGAGCTCTCTACGACGGCAAGGTGGATCTAAAAGAAGCAATCCGAGCCATTGGC GATGGCCGACTTCAGGACCCACCAAGTAGCAAACCACTGATGGCATGA
Upstream 100 bases:
>100_bases AGCTGAATCATCAAACGCGCATATTGAAGCGCGTTCGATCAGCAACTGAAGGCCCTTCGCCCTGCAGGATGGAGGTCTAA GGCAGCGTTCTTTGCCAATC
Downstream 100 bases:
>100_bases GGACCTTGGACTATGAATTGACCTTGCTGGAGCCGTAAATTGAATTCATTATCACTTCAGTTGTGACGCATACCGCTCCC AAGATCAGCGCCTCAAGTGG
Product: 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
Products: NA
Alternate protein names: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MEIIPAIDLLDSACVRLHQGDYAKVTRFSEDPVAQALSWQKQGATRLHLVDLDGAKSGEPVNDSCVRAITSALNIPVQLG GGVRTLERAEELLAYGLEQVILGTVAIEQPQLVKQLAQRNPGRIIVGIDAKNGKVATRGWISQSEVNATDLAADFNAAGI AAIISTDIATDGTLEGPNLESLRAMANASSVPLIASGGVGCMADLLSLLALEPYGVSGVIVGRALYDGKVDLKEAIRAIG DGRLQDPPSSKPLMA
Sequences:
>Translated_255_residues MEIIPAIDLLDSACVRLHQGDYAKVTRFSEDPVAQALSWQKQGATRLHLVDLDGAKSGEPVNDSCVRAITSALNIPVQLG GGVRTLERAEELLAYGLEQVILGTVAIEQPQLVKQLAQRNPGRIIVGIDAKNGKVATRGWISQSEVNATDLAADFNAAGI AAIISTDIATDGTLEGPNLESLRAMANASSVPLIASGGVGCMADLLSLLALEPYGVSGVIVGRALYDGKVDLKEAIRAIG DGRLQDPPSSKPLMA >Mature_255_residues MEIIPAIDLLDSACVRLHQGDYAKVTRFSEDPVAQALSWQKQGATRLHLVDLDGAKSGEPVNDSCVRAITSALNIPVQLG GGVRTLERAEELLAYGLEQVILGTVAIEQPQLVKQLAQRNPGRIIVGIDAKNGKVATRGWISQSEVNATDLAADFNAAGI AAIISTDIATDGTLEGPNLESLRAMANASSVPLIASGGVGCMADLLSLLALEPYGVSGVIVGRALYDGKVDLKEAIRAIG DGRLQDPPSSKPLMA
Specific function: Histidine biosynthesis; fourth step. [C]
COG id: COG0106
COG function: function code E; Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hisA/hisF family
Homologues:
Organism=Escherichia coli, GI87082028, Length=241, Percent_Identity=38.5892116182573, Blast_Score=153, Evalue=8e-39, Organism=Escherichia coli, GI1788336, Length=245, Percent_Identity=27.7551020408163, Blast_Score=87, Evalue=1e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS4_PROM3 (A2CAH8)
Other databases:
- EMBL: CP000554 - RefSeq: YP_001017753.1 - ProteinModelPortal: A2CAH8 - SMR: A2CAH8 - STRING: A2CAH8 - GeneID: 4778115 - GenomeReviews: CP000554_GR - KEGG: pmf:P9303_17461 - eggNOG: COG0106 - HOGENOM: HBG541613 - OMA: SIIYTDI - ProtClustDB: PRK00748 - GO: GO:0005737 - HAMAP: MF_01014 - InterPro: IPR013785 - InterPro: IPR006062 - InterPro: IPR006063 - InterPro: IPR023016 - InterPro: IPR011060 - Gene3D: G3DSA:3.20.20.70 - TIGRFAMs: TIGR00007
Pfam domain/function: PF00977 His_biosynth; SSF51366 RibP_bind_barrel
EC number: =5.3.1.16
Molecular weight: Translated: 26672; Mature: 26672
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: ACT_SITE 8-8 ACT_SITE 129-129
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIIPAIDLLDSACVRLHQGDYAKVTRFSEDPVAQALSWQKQGATRLHLVDLDGAKSGEP CCCCCHHHHHHHHHHHHCCCCCHHEEECCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCC VNDSCVRAITSALNIPVQLGGGVRTLERAEELLAYGLEQVILGTVAIEQPQLVKQLAQRN CCHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC PGRIIVGIDAKNGKVATRGWISQSEVNATDLAADFNAAGIAAIISTDIATDGTLEGPNLE CCEEEEEEECCCCEEEECCCCCCCCCCHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCHH SLRAMANASSVPLIASGGVGCMADLLSLLALEPYGVSGVIVGRALYDGKVDLKEAIRAIG HHHHHHCCCCCCEEECCCHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCHHHHHHHHC DGRLQDPPSSKPLMA CCCCCCCCCCCCCCC >Mature Secondary Structure MEIIPAIDLLDSACVRLHQGDYAKVTRFSEDPVAQALSWQKQGATRLHLVDLDGAKSGEP CCCCCHHHHHHHHHHHHCCCCCHHEEECCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCC VNDSCVRAITSALNIPVQLGGGVRTLERAEELLAYGLEQVILGTVAIEQPQLVKQLAQRN CCHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC PGRIIVGIDAKNGKVATRGWISQSEVNATDLAADFNAAGIAAIISTDIATDGTLEGPNLE CCEEEEEEECCCCEEEECCCCCCCCCCHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCHH SLRAMANASSVPLIASGGVGCMADLLSLLALEPYGVSGVIVGRALYDGKVDLKEAIRAIG HHHHHHCCCCCCEEECCCHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCHHHHHHHHC DGRLQDPPSSKPLMA CCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA