| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is pgsA [H]
Identifier: 124023448
GI number: 124023448
Start: 1528826
End: 1529395
Strand: Reverse
Name: pgsA [H]
Synonym: P9303_17481
Alternate gene names: 124023448
Gene position: 1529395-1528826 (Counterclockwise)
Preceding gene: 124023451
Following gene: 124023446
Centisome position: 57.01
GC content: 57.02
Gene sequence:
>570_bases GTGAGTGCACCATCCCGCCTCGGTTCACCATCAACACTGAGAAGATCGGCAAATGCTCTAACCGTGGGGCGTTCTGCCGC AGGCCTCCCCCTGGTGTTGTTGCTTCAATTGGGTCAGCCTGCTCTGGCATGGGTGTTGTTGCTGCTTGCAGGGCTTAGCG ACGCCGCTGATGGCTGGCTGGCCCGAAGAGCAGGTGGTGGTAGTAGCTGGGGCGCTCGCCTGGACCCGCTTGCTGACAAG CTTCTTCTAGCAGCACCGATGATCTGGCTGGCCAGCAACGAGGTCTTGCCTGTTTGGTCGATCTGGTTACTGCTGGCCAG GGAACTACTGATTTCCGGTTGGCGTGCTCAAGTCTCATCTGGTGCGCCTGCTTCTTGGGGAGGTAAAGCAAAGACGATCC TTCAATTCCTAAGCATGCTGCTGTTGTTGTGGCCGCCTAGTTGGGGAAGCCACAACTTTTGCCTAAATATGCAGCACCTG GGCTGGTGGTTGTTCTGGCCATCTCTGTTCCTGGCGCTTAGCTCTGCGGTGGCATACATCAAACCCCGATCAAGGATTGA TCGGCACTGA
Upstream 100 bases:
>100_bases GATGTGGCTGGCACGACACTGAGCACAGGCGTTGACATGACATCCTTCACCGTCTGCTGGAGCACCATGAATCACATGCA AGTTCATTCATTCTGAGCCT
Downstream 100 bases:
>100_bases AATCTGGTTCAGCCGTTGGCTTCAAGGAGTAGTCGTTGCAGTAGCTATCTTCGAGGCCAGTCTCAAGGTCAAAGCGTGGT TGCCAGGCCAATTCCCGCTC
Product: CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase
Products: NA
Alternate protein names: Phosphatidylglycerophosphate synthase; PGP synthase [H]
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MSAPSRLGSPSTLRRSANALTVGRSAAGLPLVLLLQLGQPALAWVLLLLAGLSDAADGWLARRAGGGSSWGARLDPLADK LLLAAPMIWLASNEVLPVWSIWLLLARELLISGWRAQVSSGAPASWGGKAKTILQFLSMLLLLWPPSWGSHNFCLNMQHL GWWLFWPSLFLALSSAVAYIKPRSRIDRH
Sequences:
>Translated_189_residues MSAPSRLGSPSTLRRSANALTVGRSAAGLPLVLLLQLGQPALAWVLLLLAGLSDAADGWLARRAGGGSSWGARLDPLADK LLLAAPMIWLASNEVLPVWSIWLLLARELLISGWRAQVSSGAPASWGGKAKTILQFLSMLLLLWPPSWGSHNFCLNMQHL GWWLFWPSLFLALSSAVAYIKPRSRIDRH >Mature_188_residues SAPSRLGSPSTLRRSANALTVGRSAAGLPLVLLLQLGQPALAWVLLLLAGLSDAADGWLARRAGGGSSWGARLDPLADKL LLAAPMIWLASNEVLPVWSIWLLLARELLISGWRAQVSSGAPASWGGKAKTILQFLSMLLLLWPPSWGSHNFCLNMQHLG WWLFWPSLFLALSSAVAYIKPRSRIDRH
Specific function: This protein catalyzes the committed step to the synthesis of the acidic phospholipids [H]
COG id: COG0558
COG function: function code I; Phosphatidylglycerophosphate synthase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
Organism=Escherichia coli, GI1788220, Length=118, Percent_Identity=35.5932203389831, Blast_Score=62, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000462 - InterPro: IPR004570 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.5 [H]
Molecular weight: Translated: 20521; Mature: 20390
Theoretical pI: Translated: 11.88; Mature: 11.88
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPSRLGSPSTLRRSANALTVGRSAAGLPLVLLLQLGQPALAWVLLLLAGLSDAADGWL CCCCCCCCCCHHHHHCCCHHEECCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHH ARRAGGGSSWGARLDPLADKLLLAAPMIWLASNEVLPVWSIWLLLARELLISGWRAQVSS HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC GAPASWGGKAKTILQFLSMLLLLWPPSWGSHNFCLNMQHLGWWLFWPSLFLALSSAVAYI CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHH KPRSRIDRH CCHHHCCCC >Mature Secondary Structure SAPSRLGSPSTLRRSANALTVGRSAAGLPLVLLLQLGQPALAWVLLLLAGLSDAADGWL CCCCCCCCCHHHHHCCCHHEECCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHH ARRAGGGSSWGARLDPLADKLLLAAPMIWLASNEVLPVWSIWLLLARELLISGWRAQVSS HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC GAPASWGGKAKTILQFLSMLLLLWPPSWGSHNFCLNMQHLGWWLFWPSLFLALSSAVAYI CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHH KPRSRIDRH CCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA