| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is fur [C]
Identifier: 124023445
GI number: 124023445
Start: 1526536
End: 1526946
Strand: Reverse
Name: fur [C]
Synonym: P9303_17451
Alternate gene names: 124023445
Gene position: 1526946-1526536 (Counterclockwise)
Preceding gene: 124023446
Following gene: 124023444
Centisome position: 56.92
GC content: 52.31
Gene sequence:
>411_bases GTGCAGGGAGCCTTCGAACGCTGCCGGCTGCTCGGGATGCGACTAAGCCGTCAGCGGCGCATGGTGCTGGATCTCCTCTG GAGCGAAGCCACTCATCTCAGTGCTCGCGATATCTTTCAAAAGCTCAATGCCTGTGGTCGGTCCATCGGTCACACATCCG TCTATCAGAACCTGGAGGCACTTCAATCAGCAGGACTAATCGAATGTCTCGATCGAGCCAATGGTCGCCTATACAGCTAC CGAAGCGATCCTCATAGCCACCTCACCTGCATAGAGACCGGCAACATCACAGACCTTGATATAGAACTCCCTGAAGATTT GCTCGATCAAATCGAGGCCAAAACTGGTTACTGCATTCATTCCTATACCCTTCAACTCAACGGTCGGCCAGCATGTAATA ACCAGAACTAA
Upstream 100 bases:
>100_bases GACCTTGCTGGAGCCGTAAATTGAATTCATTATCACTTCAGTTGTGACGCATACCGCTCCCAAGATCAGCGCCTCAAGTG GTGGGCGGGATGAAGATGGA
Downstream 100 bases:
>100_bases AAACATCAAGATCTCAACGGACTGGAGGATTTGCCTAACGCTCGTTAACTTGATGGCATAAGCCTTGTGCCGTGGTGAAT TTGGCGGACAGCACATCCAC
Product: ferric uptake regulator family protein
Products: NA
Alternate protein names: Ferric Uptake Regulator; Ferric Uptake Regulation Protein; Ferric Uptake Regulator Fur Family; FUR Family Transcriptional Regulator; Transcriptional Regulator Fur Family; Transcriptional Regulator Fur Family Protein; Fur Family Ferric Uptake Regulator
Number of amino acids: Translated: 136; Mature: 136
Protein sequence:
>136_residues MQGAFERCRLLGMRLSRQRRMVLDLLWSEATHLSARDIFQKLNACGRSIGHTSVYQNLEALQSAGLIECLDRANGRLYSY RSDPHSHLTCIETGNITDLDIELPEDLLDQIEAKTGYCIHSYTLQLNGRPACNNQN
Sequences:
>Translated_136_residues MQGAFERCRLLGMRLSRQRRMVLDLLWSEATHLSARDIFQKLNACGRSIGHTSVYQNLEALQSAGLIECLDRANGRLYSY RSDPHSHLTCIETGNITDLDIELPEDLLDQIEAKTGYCIHSYTLQLNGRPACNNQN >Mature_136_residues MQGAFERCRLLGMRLSRQRRMVLDLLWSEATHLSARDIFQKLNACGRSIGHTSVYQNLEALQSAGLIECLDRANGRLYSY RSDPHSHLTCIETGNITDLDIELPEDLLDQIEAKTGYCIHSYTLQLNGRPACNNQN
Specific function: Acts As A Global Negative Controlling Element, Employing Fe(2+) As A Cofactor To Bind The Operator Of The Repressed Genes. Regulates The Expression Of Several Outer-Membrane Proteins Including The Iron Transport Operon. [C]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15425; Mature: 15425
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 4.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQGAFERCRLLGMRLSRQRRMVLDLLWSEATHLSARDIFQKLNACGRSIGHTSVYQNLEA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHH LQSAGLIECLDRANGRLYSYRSDPHSHLTCIETGNITDLDIELPEDLLDQIEAKTGYCIH HHHCCHHHHHHHCCCCEEEECCCCCCCEEEEECCCEEEEECCCCHHHHHHHHHCCCEEEE SYTLQLNGRPACNNQN EEEEEECCCCCCCCCC >Mature Secondary Structure MQGAFERCRLLGMRLSRQRRMVLDLLWSEATHLSARDIFQKLNACGRSIGHTSVYQNLEA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHH LQSAGLIECLDRANGRLYSYRSDPHSHLTCIETGNITDLDIELPEDLLDQIEAKTGYCIH HHHCCHHHHHHHCCCCEEEECCCCCCCEEEEECCCEEEEECCCCHHHHHHHHHCCCEEEE SYTLQLNGRPACNNQN EEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA