The gene/protein map for NC_008820 is currently unavailable.
Definition Prochlorococcus marinus str. MIT 9303, complete genome.
Accession NC_008820
Length 2,682,675

Click here to switch to the map view.

The map label for this gene is 124023187

Identifier: 124023187

GI number: 124023187

Start: 1280881

End: 1282608

Strand: Reverse

Name: 124023187

Synonym: P9303_14831

Alternate gene names: NA

Gene position: 1282608-1280881 (Counterclockwise)

Preceding gene: 124023188

Following gene: 124023186

Centisome position: 47.81

GC content: 42.53

Gene sequence:

>1728_bases
TTGAATTGCCCGAGTTTCTCTAGGCGCTCGCTGCTCAACGTAACAAATCCATCCGTTTTAAAGGTGACACTTAAGATCTC
ATTACTAGTCTCATTAAGTCTCTCAACTCTTGCCTGTGAGATTGCTTTCGCAAAACCGTCCTGGTCGTACGTGCCCTTAA
TGGCTGGACAGTCAGCACGTCCTCTCAATGGAAGCTTTAATAAAGTTCCCGTTCTCCACTCCAACCAGCCGGAGACAGTT
GTTGGCTCAGGGATACTCGTTAATACAGCTCCAGGTTCAGCAGTAGTCGTCCGTACAGGTCAACAATTAAGAAATGCAGA
ATTTACCTTTAACGGCAAGTTCGGGATTCATATTCATCATAAGTATTATCCTCGCGACATCCGTAAGCTTGGCAACAGCC
GACAACGTGGATTGCTTACTATTGCAGCAATAGCAAACAATCCAACAGATTCATCAATCGAACTTAAATTTGATCGAGGT
TCAGTTAAAAACAGTTTTGAGGCTCCTTACCATTCGAATAAACTTATGGGTGTAAAGCCACTGGGGCCTCGTCCATGGAA
TACAGGTCCGGGGGATGCAACAGCTGTACAGATGCTGAGAGGTAAATTGGACAGAAAATTAGTAGATAATATTGTCATTC
CACCTCACACTCAAAAACTTGTATTCACTACACAAATACCTGCAAGAGGGATTGCCAACGGACTGCTTAGTGGGACTAGC
AACGGACCTTTTCAATTAGCGGTGGTTGCTGCAGAGGGGCCAACATCAGCAAAGAATCTGATCGCTATTCTTAATTCCGG
GCAATTGGCGCCCGGACGTACTTATCTTAATAGAATTAGTGAAATTGAAACGGGCAAGGTTTTTTCGCGTGTAGCAGGTG
TAGCAATTGGTGATCACTATACAGCGAAACTAAATCATGACTTTAAGAATGGTGCTCTTCATGTACCACTTACCAGTACT
CGCAAACATCATTTTGGTACAAGAGAGATCCAGGTCAACCCTCTGGAAACTCGTATGATTGATTCAGCCGTAAATAATGT
AGGTACTTACGGTGTACGTTTTGATATCACCCTTAATCTAAAGGGCTCAGGCGCTCATCACTTAGTTTTAAGCCACCCTG
CAGCAACAGGCAAAAAGAAACCATTCACAGCATTTCGTGGTTCAATCGGAATCAAAACTGAGAATAAATATCAAGAAGTT
CATGTAGGACTACGCTCAGGACAAAGTCTTCCTATATCAGACCTAGAACTGACAACAAAAAAGGATAATCCTGTTACTAT
TAGTTTGGTCTATCCTGCAGACAATACACCTGGGCACCTACTAAGTGTTGTTCCAGTTGCACAGTATACTCAGGTTATGC
AAAAGCAAGAAAAAGTAAGCCAAGCCAAGCTAACAGTGACAGCAAGTAAGACTTACCATGCCAAACCATTAACTCCTAAG
CCTATAGTGAAAGCGAAAACCGTTGAAACGAGTAGGAATTTGAAGAAACAAAGACATCATGATACTTACAAATCGAGCAC
AAACAAAAAGCACCTATTAGCGAATGAATCCAATGATCACAATTCTCCGGTCAGCAAGCCACCAATACTCATTTCCAGTC
CTAGTAGAAATAATGCTATGCCATTAGCAATTATCAATCCGCAAAGAGTCAATTCGAGCCTTGGAAAACACTACACCGAA
GCCATAATGGCACAACAGCAATGGTTGCATCAACTGCAAAACCAATAG

Upstream 100 bases:

>100_bases
GAGAGAACATGCCGTTCCTACAGGTGGGTGAATCTTCGCGAAATTCTGCCAAGAGTGCGTATTTTGTCTTTCTTGGCAGT
GTTGGCTGGTGTGACTAGGT

Downstream 100 bases:

>100_bases
GCTACCTACAGTCGTTCGGGTTCAAGTGAAAGCGTCCGAAGACAATTCGAGGCGACGGATTACCGTTGAACTACCAAATC
ATCTAATCGCAAGACTTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 575; Mature: 575

Protein sequence:

>575_residues
MNCPSFSRRSLLNVTNPSVLKVTLKISLLVSLSLSTLACEIAFAKPSWSYVPLMAGQSARPLNGSFNKVPVLHSNQPETV
VGSGILVNTAPGSAVVVRTGQQLRNAEFTFNGKFGIHIHHKYYPRDIRKLGNSRQRGLLTIAAIANNPTDSSIELKFDRG
SVKNSFEAPYHSNKLMGVKPLGPRPWNTGPGDATAVQMLRGKLDRKLVDNIVIPPHTQKLVFTTQIPARGIANGLLSGTS
NGPFQLAVVAAEGPTSAKNLIAILNSGQLAPGRTYLNRISEIETGKVFSRVAGVAIGDHYTAKLNHDFKNGALHVPLTST
RKHHFGTREIQVNPLETRMIDSAVNNVGTYGVRFDITLNLKGSGAHHLVLSHPAATGKKKPFTAFRGSIGIKTENKYQEV
HVGLRSGQSLPISDLELTTKKDNPVTISLVYPADNTPGHLLSVVPVAQYTQVMQKQEKVSQAKLTVTASKTYHAKPLTPK
PIVKAKTVETSRNLKKQRHHDTYKSSTNKKHLLANESNDHNSPVSKPPILISSPSRNNAMPLAIINPQRVNSSLGKHYTE
AIMAQQQWLHQLQNQ

Sequences:

>Translated_575_residues
MNCPSFSRRSLLNVTNPSVLKVTLKISLLVSLSLSTLACEIAFAKPSWSYVPLMAGQSARPLNGSFNKVPVLHSNQPETV
VGSGILVNTAPGSAVVVRTGQQLRNAEFTFNGKFGIHIHHKYYPRDIRKLGNSRQRGLLTIAAIANNPTDSSIELKFDRG
SVKNSFEAPYHSNKLMGVKPLGPRPWNTGPGDATAVQMLRGKLDRKLVDNIVIPPHTQKLVFTTQIPARGIANGLLSGTS
NGPFQLAVVAAEGPTSAKNLIAILNSGQLAPGRTYLNRISEIETGKVFSRVAGVAIGDHYTAKLNHDFKNGALHVPLTST
RKHHFGTREIQVNPLETRMIDSAVNNVGTYGVRFDITLNLKGSGAHHLVLSHPAATGKKKPFTAFRGSIGIKTENKYQEV
HVGLRSGQSLPISDLELTTKKDNPVTISLVYPADNTPGHLLSVVPVAQYTQVMQKQEKVSQAKLTVTASKTYHAKPLTPK
PIVKAKTVETSRNLKKQRHHDTYKSSTNKKHLLANESNDHNSPVSKPPILISSPSRNNAMPLAIINPQRVNSSLGKHYTE
AIMAQQQWLHQLQNQ
>Mature_575_residues
MNCPSFSRRSLLNVTNPSVLKVTLKISLLVSLSLSTLACEIAFAKPSWSYVPLMAGQSARPLNGSFNKVPVLHSNQPETV
VGSGILVNTAPGSAVVVRTGQQLRNAEFTFNGKFGIHIHHKYYPRDIRKLGNSRQRGLLTIAAIANNPTDSSIELKFDRG
SVKNSFEAPYHSNKLMGVKPLGPRPWNTGPGDATAVQMLRGKLDRKLVDNIVIPPHTQKLVFTTQIPARGIANGLLSGTS
NGPFQLAVVAAEGPTSAKNLIAILNSGQLAPGRTYLNRISEIETGKVFSRVAGVAIGDHYTAKLNHDFKNGALHVPLTST
RKHHFGTREIQVNPLETRMIDSAVNNVGTYGVRFDITLNLKGSGAHHLVLSHPAATGKKKPFTAFRGSIGIKTENKYQEV
HVGLRSGQSLPISDLELTTKKDNPVTISLVYPADNTPGHLLSVVPVAQYTQVMQKQEKVSQAKLTVTASKTYHAKPLTPK
PIVKAKTVETSRNLKKQRHHDTYKSSTNKKHLLANESNDHNSPVSKPPILISSPSRNNAMPLAIINPQRVNSSLGKHYTE
AIMAQQQWLHQLQNQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62686; Mature: 62686

Theoretical pI: Translated: 10.86; Mature: 10.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNCPSFSRRSLLNVTNPSVLKVTLKISLLVSLSLSTLACEIAFAKPSWSYVPLMAGQSAR
CCCCCCCHHCEEECCCCCEEEEEEEEEEEEEECCCEEEEEEEEECCCCCEEEEECCCCCC
PLNGSFNKVPVLHSNQPETVVGSGILVNTAPGSAVVVRTGQQLRNAEFTFNGKFGIHIHH
CCCCCCCEEEEEECCCCCEEEECCEEEECCCCCEEEEECCHHHCCCEEEECCEEEEEEEE
KYYPRDIRKLGNSRQRGLLTIAAIANNPTDSSIELKFDRGSVKNSFEAPYHSNKLMGVKP
EECCHHHHHHCCCCCCCEEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEECC
LGPRPWNTGPGDATAVQMLRGKLDRKLVDNIVIPPHTQKLVFTTQIPARGIANGLLSGTS
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHCCCC
NGPFQLAVVAAEGPTSAKNLIAILNSGQLAPGRTYLNRISEIETGKVFSRVAGVAIGDHY
CCCEEEEEEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHCHHHHHHHHHHCEEECCCE
TAKLNHDFKNGALHVPLTSTRKHHFGTREIQVNPLETRMIDSAVNNVGTYGVRFDITLNL
EEEECCCCCCCEEEEEECCCCCCCCCCCEEEECCHHHHHHHHHHHCCCCEEEEEEEEEEE
KGSGAHHLVLSHPAATGKKKPFTAFRGSIGIKTENKYQEVHVGLRSGQSLPISDLELTTK
CCCCCEEEEEECCCCCCCCCCCHHHCCCEECCCCCCCEEEEEHHHCCCCCCCCCEEEEEC
KDNPVTISLVYPADNTPGHLLSVVPVAQYTQVMQKQEKVSQAKLTVTASKTYHAKPLTPK
CCCCEEEEEEECCCCCCCCEEEECCHHHHHHHHHHHHHHHHEEEEEEECCEEECCCCCCC
PIVKAKTVETSRNLKKQRHHDTYKSSTNKKHLLANESNDHNSPVSKPPILISSPSRNNAM
CCEEEEECHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCEEEECCCCCCCE
PLAIINPQRVNSSLGKHYTEAIMAQQQWLHQLQNQ
EEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNCPSFSRRSLLNVTNPSVLKVTLKISLLVSLSLSTLACEIAFAKPSWSYVPLMAGQSAR
CCCCCCCHHCEEECCCCCEEEEEEEEEEEEEECCCEEEEEEEEECCCCCEEEEECCCCCC
PLNGSFNKVPVLHSNQPETVVGSGILVNTAPGSAVVVRTGQQLRNAEFTFNGKFGIHIHH
CCCCCCCEEEEEECCCCCEEEECCEEEECCCCCEEEEECCHHHCCCEEEECCEEEEEEEE
KYYPRDIRKLGNSRQRGLLTIAAIANNPTDSSIELKFDRGSVKNSFEAPYHSNKLMGVKP
EECCHHHHHHCCCCCCCEEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEECC
LGPRPWNTGPGDATAVQMLRGKLDRKLVDNIVIPPHTQKLVFTTQIPARGIANGLLSGTS
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHCCCC
NGPFQLAVVAAEGPTSAKNLIAILNSGQLAPGRTYLNRISEIETGKVFSRVAGVAIGDHY
CCCEEEEEEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHCHHHHHHHHHHCEEECCCE
TAKLNHDFKNGALHVPLTSTRKHHFGTREIQVNPLETRMIDSAVNNVGTYGVRFDITLNL
EEEECCCCCCCEEEEEECCCCCCCCCCCEEEECCHHHHHHHHHHHCCCCEEEEEEEEEEE
KGSGAHHLVLSHPAATGKKKPFTAFRGSIGIKTENKYQEVHVGLRSGQSLPISDLELTTK
CCCCCEEEEEECCCCCCCCCCCHHHCCCEECCCCCCCEEEEEHHHCCCCCCCCCEEEEEC
KDNPVTISLVYPADNTPGHLLSVVPVAQYTQVMQKQEKVSQAKLTVTASKTYHAKPLTPK
CCCCEEEEEEECCCCCCCCEEEECCHHHHHHHHHHHHHHHHEEEEEEECCEEECCCCCCC
PIVKAKTVETSRNLKKQRHHDTYKSSTNKKHLLANESNDHNSPVSKPPILISSPSRNNAM
CCEEEEECHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCEEEECCCCCCCE
PLAIINPQRVNSSLGKHYTEAIMAQQQWLHQLQNQ
EEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA