| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124023187
Identifier: 124023187
GI number: 124023187
Start: 1280881
End: 1282608
Strand: Reverse
Name: 124023187
Synonym: P9303_14831
Alternate gene names: NA
Gene position: 1282608-1280881 (Counterclockwise)
Preceding gene: 124023188
Following gene: 124023186
Centisome position: 47.81
GC content: 42.53
Gene sequence:
>1728_bases TTGAATTGCCCGAGTTTCTCTAGGCGCTCGCTGCTCAACGTAACAAATCCATCCGTTTTAAAGGTGACACTTAAGATCTC ATTACTAGTCTCATTAAGTCTCTCAACTCTTGCCTGTGAGATTGCTTTCGCAAAACCGTCCTGGTCGTACGTGCCCTTAA TGGCTGGACAGTCAGCACGTCCTCTCAATGGAAGCTTTAATAAAGTTCCCGTTCTCCACTCCAACCAGCCGGAGACAGTT GTTGGCTCAGGGATACTCGTTAATACAGCTCCAGGTTCAGCAGTAGTCGTCCGTACAGGTCAACAATTAAGAAATGCAGA ATTTACCTTTAACGGCAAGTTCGGGATTCATATTCATCATAAGTATTATCCTCGCGACATCCGTAAGCTTGGCAACAGCC GACAACGTGGATTGCTTACTATTGCAGCAATAGCAAACAATCCAACAGATTCATCAATCGAACTTAAATTTGATCGAGGT TCAGTTAAAAACAGTTTTGAGGCTCCTTACCATTCGAATAAACTTATGGGTGTAAAGCCACTGGGGCCTCGTCCATGGAA TACAGGTCCGGGGGATGCAACAGCTGTACAGATGCTGAGAGGTAAATTGGACAGAAAATTAGTAGATAATATTGTCATTC CACCTCACACTCAAAAACTTGTATTCACTACACAAATACCTGCAAGAGGGATTGCCAACGGACTGCTTAGTGGGACTAGC AACGGACCTTTTCAATTAGCGGTGGTTGCTGCAGAGGGGCCAACATCAGCAAAGAATCTGATCGCTATTCTTAATTCCGG GCAATTGGCGCCCGGACGTACTTATCTTAATAGAATTAGTGAAATTGAAACGGGCAAGGTTTTTTCGCGTGTAGCAGGTG TAGCAATTGGTGATCACTATACAGCGAAACTAAATCATGACTTTAAGAATGGTGCTCTTCATGTACCACTTACCAGTACT CGCAAACATCATTTTGGTACAAGAGAGATCCAGGTCAACCCTCTGGAAACTCGTATGATTGATTCAGCCGTAAATAATGT AGGTACTTACGGTGTACGTTTTGATATCACCCTTAATCTAAAGGGCTCAGGCGCTCATCACTTAGTTTTAAGCCACCCTG CAGCAACAGGCAAAAAGAAACCATTCACAGCATTTCGTGGTTCAATCGGAATCAAAACTGAGAATAAATATCAAGAAGTT CATGTAGGACTACGCTCAGGACAAAGTCTTCCTATATCAGACCTAGAACTGACAACAAAAAAGGATAATCCTGTTACTAT TAGTTTGGTCTATCCTGCAGACAATACACCTGGGCACCTACTAAGTGTTGTTCCAGTTGCACAGTATACTCAGGTTATGC AAAAGCAAGAAAAAGTAAGCCAAGCCAAGCTAACAGTGACAGCAAGTAAGACTTACCATGCCAAACCATTAACTCCTAAG CCTATAGTGAAAGCGAAAACCGTTGAAACGAGTAGGAATTTGAAGAAACAAAGACATCATGATACTTACAAATCGAGCAC AAACAAAAAGCACCTATTAGCGAATGAATCCAATGATCACAATTCTCCGGTCAGCAAGCCACCAATACTCATTTCCAGTC CTAGTAGAAATAATGCTATGCCATTAGCAATTATCAATCCGCAAAGAGTCAATTCGAGCCTTGGAAAACACTACACCGAA GCCATAATGGCACAACAGCAATGGTTGCATCAACTGCAAAACCAATAG
Upstream 100 bases:
>100_bases GAGAGAACATGCCGTTCCTACAGGTGGGTGAATCTTCGCGAAATTCTGCCAAGAGTGCGTATTTTGTCTTTCTTGGCAGT GTTGGCTGGTGTGACTAGGT
Downstream 100 bases:
>100_bases GCTACCTACAGTCGTTCGGGTTCAAGTGAAAGCGTCCGAAGACAATTCGAGGCGACGGATTACCGTTGAACTACCAAATC ATCTAATCGCAAGACTTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 575; Mature: 575
Protein sequence:
>575_residues MNCPSFSRRSLLNVTNPSVLKVTLKISLLVSLSLSTLACEIAFAKPSWSYVPLMAGQSARPLNGSFNKVPVLHSNQPETV VGSGILVNTAPGSAVVVRTGQQLRNAEFTFNGKFGIHIHHKYYPRDIRKLGNSRQRGLLTIAAIANNPTDSSIELKFDRG SVKNSFEAPYHSNKLMGVKPLGPRPWNTGPGDATAVQMLRGKLDRKLVDNIVIPPHTQKLVFTTQIPARGIANGLLSGTS NGPFQLAVVAAEGPTSAKNLIAILNSGQLAPGRTYLNRISEIETGKVFSRVAGVAIGDHYTAKLNHDFKNGALHVPLTST RKHHFGTREIQVNPLETRMIDSAVNNVGTYGVRFDITLNLKGSGAHHLVLSHPAATGKKKPFTAFRGSIGIKTENKYQEV HVGLRSGQSLPISDLELTTKKDNPVTISLVYPADNTPGHLLSVVPVAQYTQVMQKQEKVSQAKLTVTASKTYHAKPLTPK PIVKAKTVETSRNLKKQRHHDTYKSSTNKKHLLANESNDHNSPVSKPPILISSPSRNNAMPLAIINPQRVNSSLGKHYTE AIMAQQQWLHQLQNQ
Sequences:
>Translated_575_residues MNCPSFSRRSLLNVTNPSVLKVTLKISLLVSLSLSTLACEIAFAKPSWSYVPLMAGQSARPLNGSFNKVPVLHSNQPETV VGSGILVNTAPGSAVVVRTGQQLRNAEFTFNGKFGIHIHHKYYPRDIRKLGNSRQRGLLTIAAIANNPTDSSIELKFDRG SVKNSFEAPYHSNKLMGVKPLGPRPWNTGPGDATAVQMLRGKLDRKLVDNIVIPPHTQKLVFTTQIPARGIANGLLSGTS NGPFQLAVVAAEGPTSAKNLIAILNSGQLAPGRTYLNRISEIETGKVFSRVAGVAIGDHYTAKLNHDFKNGALHVPLTST RKHHFGTREIQVNPLETRMIDSAVNNVGTYGVRFDITLNLKGSGAHHLVLSHPAATGKKKPFTAFRGSIGIKTENKYQEV HVGLRSGQSLPISDLELTTKKDNPVTISLVYPADNTPGHLLSVVPVAQYTQVMQKQEKVSQAKLTVTASKTYHAKPLTPK PIVKAKTVETSRNLKKQRHHDTYKSSTNKKHLLANESNDHNSPVSKPPILISSPSRNNAMPLAIINPQRVNSSLGKHYTE AIMAQQQWLHQLQNQ >Mature_575_residues MNCPSFSRRSLLNVTNPSVLKVTLKISLLVSLSLSTLACEIAFAKPSWSYVPLMAGQSARPLNGSFNKVPVLHSNQPETV VGSGILVNTAPGSAVVVRTGQQLRNAEFTFNGKFGIHIHHKYYPRDIRKLGNSRQRGLLTIAAIANNPTDSSIELKFDRG SVKNSFEAPYHSNKLMGVKPLGPRPWNTGPGDATAVQMLRGKLDRKLVDNIVIPPHTQKLVFTTQIPARGIANGLLSGTS NGPFQLAVVAAEGPTSAKNLIAILNSGQLAPGRTYLNRISEIETGKVFSRVAGVAIGDHYTAKLNHDFKNGALHVPLTST RKHHFGTREIQVNPLETRMIDSAVNNVGTYGVRFDITLNLKGSGAHHLVLSHPAATGKKKPFTAFRGSIGIKTENKYQEV HVGLRSGQSLPISDLELTTKKDNPVTISLVYPADNTPGHLLSVVPVAQYTQVMQKQEKVSQAKLTVTASKTYHAKPLTPK PIVKAKTVETSRNLKKQRHHDTYKSSTNKKHLLANESNDHNSPVSKPPILISSPSRNNAMPLAIINPQRVNSSLGKHYTE AIMAQQQWLHQLQNQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62686; Mature: 62686
Theoretical pI: Translated: 10.86; Mature: 10.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNCPSFSRRSLLNVTNPSVLKVTLKISLLVSLSLSTLACEIAFAKPSWSYVPLMAGQSAR CCCCCCCHHCEEECCCCCEEEEEEEEEEEEEECCCEEEEEEEEECCCCCEEEEECCCCCC PLNGSFNKVPVLHSNQPETVVGSGILVNTAPGSAVVVRTGQQLRNAEFTFNGKFGIHIHH CCCCCCCEEEEEECCCCCEEEECCEEEECCCCCEEEEECCHHHCCCEEEECCEEEEEEEE KYYPRDIRKLGNSRQRGLLTIAAIANNPTDSSIELKFDRGSVKNSFEAPYHSNKLMGVKP EECCHHHHHHCCCCCCCEEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEECC LGPRPWNTGPGDATAVQMLRGKLDRKLVDNIVIPPHTQKLVFTTQIPARGIANGLLSGTS CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHCCCC NGPFQLAVVAAEGPTSAKNLIAILNSGQLAPGRTYLNRISEIETGKVFSRVAGVAIGDHY CCCEEEEEEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHCHHHHHHHHHHCEEECCCE TAKLNHDFKNGALHVPLTSTRKHHFGTREIQVNPLETRMIDSAVNNVGTYGVRFDITLNL EEEECCCCCCCEEEEEECCCCCCCCCCCEEEECCHHHHHHHHHHHCCCCEEEEEEEEEEE KGSGAHHLVLSHPAATGKKKPFTAFRGSIGIKTENKYQEVHVGLRSGQSLPISDLELTTK CCCCCEEEEEECCCCCCCCCCCHHHCCCEECCCCCCCEEEEEHHHCCCCCCCCCEEEEEC KDNPVTISLVYPADNTPGHLLSVVPVAQYTQVMQKQEKVSQAKLTVTASKTYHAKPLTPK CCCCEEEEEEECCCCCCCCEEEECCHHHHHHHHHHHHHHHHEEEEEEECCEEECCCCCCC PIVKAKTVETSRNLKKQRHHDTYKSSTNKKHLLANESNDHNSPVSKPPILISSPSRNNAM CCEEEEECHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCEEEECCCCCCCE PLAIINPQRVNSSLGKHYTEAIMAQQQWLHQLQNQ EEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNCPSFSRRSLLNVTNPSVLKVTLKISLLVSLSLSTLACEIAFAKPSWSYVPLMAGQSAR CCCCCCCHHCEEECCCCCEEEEEEEEEEEEEECCCEEEEEEEEECCCCCEEEEECCCCCC PLNGSFNKVPVLHSNQPETVVGSGILVNTAPGSAVVVRTGQQLRNAEFTFNGKFGIHIHH CCCCCCCEEEEEECCCCCEEEECCEEEECCCCCEEEEECCHHHCCCEEEECCEEEEEEEE KYYPRDIRKLGNSRQRGLLTIAAIANNPTDSSIELKFDRGSVKNSFEAPYHSNKLMGVKP EECCHHHHHHCCCCCCCEEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEECC LGPRPWNTGPGDATAVQMLRGKLDRKLVDNIVIPPHTQKLVFTTQIPARGIANGLLSGTS CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHCCCC NGPFQLAVVAAEGPTSAKNLIAILNSGQLAPGRTYLNRISEIETGKVFSRVAGVAIGDHY CCCEEEEEEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHCHHHHHHHHHHCEEECCCE TAKLNHDFKNGALHVPLTSTRKHHFGTREIQVNPLETRMIDSAVNNVGTYGVRFDITLNL EEEECCCCCCCEEEEEECCCCCCCCCCCEEEECCHHHHHHHHHHHCCCCEEEEEEEEEEE KGSGAHHLVLSHPAATGKKKPFTAFRGSIGIKTENKYQEVHVGLRSGQSLPISDLELTTK CCCCCEEEEEECCCCCCCCCCCHHHCCCEECCCCCCCEEEEEHHHCCCCCCCCCEEEEEC KDNPVTISLVYPADNTPGHLLSVVPVAQYTQVMQKQEKVSQAKLTVTASKTYHAKPLTPK CCCCEEEEEEECCCCCCCCEEEECCHHHHHHHHHHHHHHHHEEEEEEECCEEECCCCCCC PIVKAKTVETSRNLKKQRHHDTYKSSTNKKHLLANESNDHNSPVSKPPILISSPSRNNAM CCEEEEECHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCEEEECCCCCCCE PLAIINPQRVNSSLGKHYTEAIMAQQQWLHQLQNQ EEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA