| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124023186
Identifier: 124023186
GI number: 124023186
Start: 1279788
End: 1280855
Strand: Reverse
Name: 124023186
Synonym: P9303_14821
Alternate gene names: NA
Gene position: 1280855-1279788 (Counterclockwise)
Preceding gene: 124023187
Following gene: 124023185
Centisome position: 47.75
GC content: 45.32
Gene sequence:
>1068_bases GTGAAAGCGTCCGAAGACAATTCGAGGCGACGGATTACCGTTGAACTACCAAATCATCTAATCGCAAGACTTGATGAACT TAAAAGGGAATGGGGGTTAAGAGCACGAGGTGATCTTTTAGCACGTTTACTTGAAGAACTGTTTACCCCTCAAGAGAATG ATCGAGATGATCAACAGACTGGAGGACTATTTCAAATAAATGAACCAGATCCACTCGAAAACGATGATAGTGGATCAGTG TCTAGATCTTTACCGCCCGAATACAATGAGACAAAAGCACTGGTATTAATAGGGCGGGGATCGAATGATAGAGGTGAACC TGGCTTCAAGGCAGAGGAAAACAAGGTAGAAAGTAGTCATGAAGTTAAGACTACACATTCAGTTGGGATTGATTTACCAG GCTTTGTGCGTAAACAAACGGATAATCTTCGAGAAAGTCTTGGCAACAACAAACCGGGTCAAAATTCGAGGGACTTGCCC TTAGTTACAACAGTTTCTGAGACTGACGTGAATGAGAGTCTTAATGCCGCAAATCGGCACTGGATTTCACTTTATGGCAA TCCACCAGGGGAGACAGTCGTTGAAGCTGCAATGATCTGGTTAGCGAGGGACATATGGCTTCATGTCGATGGTACTGATG GACGGCCATTCACATGGAGTGCCGCAAATCGACTAATGACGGAACTCTGTTCAAGTTGGCAGGTGAAACCGGCGACCTTT GAGCTTGTGATGGTGGTTGCTGGAATTTTGGAAGATCCGTTTGCCTGCAAGAGCCTTTCAGAGAGAATGCCCACACTGAT CCGCAGATTTGTCAATCGCTTTAAACGAAGTCGTCAGGTCACCTCTTTCCAAACACTTGAATCAACAATGACACTTCATG GAGCACTCAAACTTCTCAAGCTGCCATCTCATGCTGGTGCACCAATGACACTTTCTACCATTCGAGAGGCCTACAAATCA CAGGCCATAACCATCCATCCGGACGCTGGAGGTTCAACAGAGGCAATGAGAAGGCTTAATGAAGCATATCAATTGCTTAA AGAGCTCTACCGCGAGAAACCTAATTAG
Upstream 100 bases:
>100_bases TCGAGCCTTGGAAAACACTACACCGAAGCCATAATGGCACAACAGCAATGGTTGCATCAACTGCAAAACCAATAGGCTAC CTACAGTCGTTCGGGTTCAA
Downstream 100 bases:
>100_bases TCTCAATAATCTAATTAGTGACTCAGTATTGGTCTAATAGTGAGACTTGATAAATACTTTATAGATTGACTTGGAGTATG CCTAGGGTGCATTCGGCTGA
Product: chaperone protein DnaJ
Products: NA
Alternate protein names: Chaperone; Heat Shock Protein DNAJ N-Terminal Domain Protein; Chaperone Containing DNAj Domain; Cyanobacteria-Specific Chaperone Containing DNAj Domain; DNAJ Domain
Number of amino acids: Translated: 355; Mature: 355
Protein sequence:
>355_residues MKASEDNSRRRITVELPNHLIARLDELKREWGLRARGDLLARLLEELFTPQENDRDDQQTGGLFQINEPDPLENDDSGSV SRSLPPEYNETKALVLIGRGSNDRGEPGFKAEENKVESSHEVKTTHSVGIDLPGFVRKQTDNLRESLGNNKPGQNSRDLP LVTTVSETDVNESLNAANRHWISLYGNPPGETVVEAAMIWLARDIWLHVDGTDGRPFTWSAANRLMTELCSSWQVKPATF ELVMVVAGILEDPFACKSLSERMPTLIRRFVNRFKRSRQVTSFQTLESTMTLHGALKLLKLPSHAGAPMTLSTIREAYKS QAITIHPDAGGSTEAMRRLNEAYQLLKELYREKPN
Sequences:
>Translated_355_residues MKASEDNSRRRITVELPNHLIARLDELKREWGLRARGDLLARLLEELFTPQENDRDDQQTGGLFQINEPDPLENDDSGSV SRSLPPEYNETKALVLIGRGSNDRGEPGFKAEENKVESSHEVKTTHSVGIDLPGFVRKQTDNLRESLGNNKPGQNSRDLP LVTTVSETDVNESLNAANRHWISLYGNPPGETVVEAAMIWLARDIWLHVDGTDGRPFTWSAANRLMTELCSSWQVKPATF ELVMVVAGILEDPFACKSLSERMPTLIRRFVNRFKRSRQVTSFQTLESTMTLHGALKLLKLPSHAGAPMTLSTIREAYKS QAITIHPDAGGSTEAMRRLNEAYQLLKELYREKPN >Mature_355_residues MKASEDNSRRRITVELPNHLIARLDELKREWGLRARGDLLARLLEELFTPQENDRDDQQTGGLFQINEPDPLENDDSGSV SRSLPPEYNETKALVLIGRGSNDRGEPGFKAEENKVESSHEVKTTHSVGIDLPGFVRKQTDNLRESLGNNKPGQNSRDLP LVTTVSETDVNESLNAANRHWISLYGNPPGETVVEAAMIWLARDIWLHVDGTDGRPFTWSAANRLMTELCSSWQVKPATF ELVMVVAGILEDPFACKSLSERMPTLIRRFVNRFKRSRQVTSFQTLESTMTLHGALKLLKLPSHAGAPMTLSTIREAYKS QAITIHPDAGGSTEAMRRLNEAYQLLKELYREKPN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39912; Mature: 39912
Theoretical pI: Translated: 6.33; Mature: 6.33
Prosite motif: PS50076 DNAJ_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKASEDNSRRRITVELPNHLIARLDELKREWGLRARGDLLARLLEELFTPQENDRDDQQT CCCCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHC GGLFQINEPDPLENDDSGSVSRSLPPEYNETKALVLIGRGSNDRGEPGFKAEENKVESSH CCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHCCCCH EVKTTHSVGIDLPGFVRKQTDNLRESLGNNKPGQNSRDLPLVTTVSETDVNESLNAANRH HHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCHHCCHHHHHCCCCE WISLYGNPPGETVVEAAMIWLARDIWLHVDGTDGRPFTWSAANRLMTELCSSWQVKPATF EEEEECCCCHHHHHHHHHHHHHHHEEEEEECCCCCCEEHHHHHHHHHHHHHCCCCCCHHH ELVMVVAGILEDPFACKSLSERMPTLIRRFVNRFKRSRQVTSFQTLESTMTLHGALKLLK HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LPSHAGAPMTLSTIREAYKSQAITIHPDAGGSTEAMRRLNEAYQLLKELYREKPN CCCCCCCCEEHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKASEDNSRRRITVELPNHLIARLDELKREWGLRARGDLLARLLEELFTPQENDRDDQQT CCCCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHC GGLFQINEPDPLENDDSGSVSRSLPPEYNETKALVLIGRGSNDRGEPGFKAEENKVESSH CCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHCCCCH EVKTTHSVGIDLPGFVRKQTDNLRESLGNNKPGQNSRDLPLVTTVSETDVNESLNAANRH HHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCHHCCHHHHHCCCCE WISLYGNPPGETVVEAAMIWLARDIWLHVDGTDGRPFTWSAANRLMTELCSSWQVKPATF EEEEECCCCHHHHHHHHHHHHHHHEEEEEECCCCCCEEHHHHHHHHHHHHHCCCCCCHHH ELVMVVAGILEDPFACKSLSERMPTLIRRFVNRFKRSRQVTSFQTLESTMTLHGALKLLK HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LPSHAGAPMTLSTIREAYKSQAITIHPDAGGSTEAMRRLNEAYQLLKELYREKPN CCCCCCCCEEHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA