| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
Click here to switch to the map view.
The map label for this gene is 124023177
Identifier: 124023177
GI number: 124023177
Start: 1266788
End: 1267972
Strand: Reverse
Name: 124023177
Synonym: P9303_14731
Alternate gene names: NA
Gene position: 1267972-1266788 (Counterclockwise)
Preceding gene: 124023178
Following gene: 124023175
Centisome position: 47.27
GC content: 42.53
Gene sequence:
>1185_bases ATGAGATTCAACCTTCTACCATCACGTCATCTTGGCAGTCTGCTGCTGATCTTAACGATGGTGGGATGTCAGGAATCCCC ATCAACACAGAAGAAATCATCAGTTCCTTTTGTATTTAAATCTCTAGAACTTCGCCACAAGCAAGCTGATGGATCAAGAG ACTGGGACCTAAACAGCCCCTTAGCTCGCTATGAATTAGGCAGCAGAGTTGTAAGGGCTCGCAACCCAGAGGGTGTTCTG TACAAAGAAAACAAACCATCATTTGAAGTTAGTGCTCAGGCCGCCACAGTTTTAAAAGATGGTGAGACAGTGCTGCTTGA AGGAAATGTAAAGGTTCAGCAGCTTACCGGAGAAAAAGTGTTGATCACTGGTGATCGTTTGCGTTGGACACCTAATGAAT CGAAGATGGTGATTGAGCAACGACCCCAAGCTCTTGATAATCTTTCAAGAATTACTGCCAAGACGGTATTGTTTCAACAG TTAACCCAAGAAATTGTATTTAAAGGTCCAACAAAATTTGAACGTTGGAAAAAACAACGCAAAGACAGTAATGAACCCTC CATTGTGATCCGCGGACGCAATGGCAGTTGGAATCTAGACAGCGGTAAACTTAATGCTATGGGGCCAATCCTTGGCCACC GAATTGTAAGTAAAAGTGATATTCCACAGCAACTTACAGCCACAAGGTTGCAAGGAAACACGAAGAAGGGTTACCTCGAT CTAATCAAGCCTGTTACACTTACGATTCCAGAACAAAAAGCAAGTTTACTTGCCCAGACCACGCGCTGGAAATTTAATAG CGAAAAGATTGAAAGCAATAAGCCTTTCACTGCAACTCAGGAAAGATCAACCTATCGCGGAGATAGTTTTAAAGTTGATC TTGCCCGTACAGAAGTAGAAATTCCTCAAAAATGTGAACTCAGTCAACCTGGCGAACAACTCAGGGCTGATAAATGTATT TGGAATTGGAGCACGGAAGAGGTTCAGGCAATTGGCGATGTAATCTTGAAGCGAGAAGCAAATAATCAGATTACTCGAAG TGATAAACTAGAAGGACGAATTGGAGACGAGGGAACAGTGTCTTTCTCGTCATCTGGTTCTAAAGTGAGATCACAATTAA AAATTGAAGAAGCTAAGGAAAAATCGATCCTTTCCTCTAAGTCCTCTCCTCCAGTTCAGTTCTAA
Upstream 100 bases:
>100_bases ACTGGTCTAACAGTTTAGCTTGGGGACAATTGCAAAGTGGAGCTTTATTGCCACCATCTCAACCCGTAATGCAAAGACTA GAACTCTCTTCTTCCCTCTA
Downstream 100 bases:
>100_bases GACGTTGCGACCATCCAATCAACCAAAGTTCATCTGAACGACTAAAACATCGCTCCGAACATCCACCCAGGACAACCCAA CCATTTGATGCTAATGGATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 394; Mature: 394
Protein sequence:
>394_residues MRFNLLPSRHLGSLLLILTMVGCQESPSTQKKSSVPFVFKSLELRHKQADGSRDWDLNSPLARYELGSRVVRARNPEGVL YKENKPSFEVSAQAATVLKDGETVLLEGNVKVQQLTGEKVLITGDRLRWTPNESKMVIEQRPQALDNLSRITAKTVLFQQ LTQEIVFKGPTKFERWKKQRKDSNEPSIVIRGRNGSWNLDSGKLNAMGPILGHRIVSKSDIPQQLTATRLQGNTKKGYLD LIKPVTLTIPEQKASLLAQTTRWKFNSEKIESNKPFTATQERSTYRGDSFKVDLARTEVEIPQKCELSQPGEQLRADKCI WNWSTEEVQAIGDVILKREANNQITRSDKLEGRIGDEGTVSFSSSGSKVRSQLKIEEAKEKSILSSKSSPPVQF
Sequences:
>Translated_394_residues MRFNLLPSRHLGSLLLILTMVGCQESPSTQKKSSVPFVFKSLELRHKQADGSRDWDLNSPLARYELGSRVVRARNPEGVL YKENKPSFEVSAQAATVLKDGETVLLEGNVKVQQLTGEKVLITGDRLRWTPNESKMVIEQRPQALDNLSRITAKTVLFQQ LTQEIVFKGPTKFERWKKQRKDSNEPSIVIRGRNGSWNLDSGKLNAMGPILGHRIVSKSDIPQQLTATRLQGNTKKGYLD LIKPVTLTIPEQKASLLAQTTRWKFNSEKIESNKPFTATQERSTYRGDSFKVDLARTEVEIPQKCELSQPGEQLRADKCI WNWSTEEVQAIGDVILKREANNQITRSDKLEGRIGDEGTVSFSSSGSKVRSQLKIEEAKEKSILSSKSSPPVQF >Mature_394_residues MRFNLLPSRHLGSLLLILTMVGCQESPSTQKKSSVPFVFKSLELRHKQADGSRDWDLNSPLARYELGSRVVRARNPEGVL YKENKPSFEVSAQAATVLKDGETVLLEGNVKVQQLTGEKVLITGDRLRWTPNESKMVIEQRPQALDNLSRITAKTVLFQQ LTQEIVFKGPTKFERWKKQRKDSNEPSIVIRGRNGSWNLDSGKLNAMGPILGHRIVSKSDIPQQLTATRLQGNTKKGYLD LIKPVTLTIPEQKASLLAQTTRWKFNSEKIESNKPFTATQERSTYRGDSFKVDLARTEVEIPQKCELSQPGEQLRADKCI WNWSTEEVQAIGDVILKREANNQITRSDKLEGRIGDEGTVSFSSSGSKVRSQLKIEEAKEKSILSSKSSPPVQF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44346; Mature: 44346
Theoretical pI: Translated: 10.36; Mature: 10.36
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFNLLPSRHLGSLLLILTMVGCQESPSTQKKSSVPFVFKSLELRHKQADGSRDWDLNSP CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHCCCCHHHHHHHHHHHHCCCCCCCCCCCC LARYELGSRVVRARNPEGVLYKENKPSFEVSAQAATVLKDGETVLLEGNVKVQQLTGEKV HHHHHHHHHHHCCCCCCCEEEECCCCCEEEECCEEEEEECCCEEEEECCEEEEEECCCEE LITGDRLRWTPNESKMVIEQRPQALDNLSRITAKTVLFQQLTQEIVFKGPTKFERWKKQR EEECCEEEECCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH KDSNEPSIVIRGRNGSWNLDSGKLNAMGPILGHRIVSKSDIPQQLTATRLQGNTKKGYLD CCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHH LIKPVTLTIPEQKASLLAQTTRWKFNSEKIESNKPFTATQERSTYRGDSFKVDLARTEVE HCCCEEEEECHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCC IPQKCELSQPGEQLRADKCIWNWSTEEVQAIGDVILKREANNQITRSDKLEGRIGDEGTV CCCCCCCCCCHHHHHHCCEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEE SFSSSGSKVRSQLKIEEAKEKSILSSKSSPPVQF EECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MRFNLLPSRHLGSLLLILTMVGCQESPSTQKKSSVPFVFKSLELRHKQADGSRDWDLNSP CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHCCCCHHHHHHHHHHHHCCCCCCCCCCCC LARYELGSRVVRARNPEGVLYKENKPSFEVSAQAATVLKDGETVLLEGNVKVQQLTGEKV HHHHHHHHHHHCCCCCCCEEEECCCCCEEEECCEEEEEECCCEEEEECCEEEEEECCCEE LITGDRLRWTPNESKMVIEQRPQALDNLSRITAKTVLFQQLTQEIVFKGPTKFERWKKQR EEECCEEEECCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH KDSNEPSIVIRGRNGSWNLDSGKLNAMGPILGHRIVSKSDIPQQLTATRLQGNTKKGYLD CCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHH LIKPVTLTIPEQKASLLAQTTRWKFNSEKIESNKPFTATQERSTYRGDSFKVDLARTEVE HCCCEEEEECHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCC IPQKCELSQPGEQLRADKCIWNWSTEEVQAIGDVILKREANNQITRSDKLEGRIGDEGTV CCCCCCCCCCHHHHHHCCEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEE SFSSSGSKVRSQLKIEEAKEKSILSSKSSPPVQF EECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA