| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124023175
Identifier: 124023175
GI number: 124023175
Start: 1265717
End: 1266253
Strand: Reverse
Name: 124023175
Synonym: P9303_14711
Alternate gene names: NA
Gene position: 1266253-1265717 (Counterclockwise)
Preceding gene: 124023177
Following gene: 124023174
Centisome position: 47.2
GC content: 53.82
Gene sequence:
>537_bases ATGCAGCCAAAGAGAGGGTCAACAGCCCGGCGATCAGGGAAATACGCGCAACTGGTCGCATCGAACGAAACAAAAGTGAT GTCAGATGCACTCACTCTTGCTCAAATGGGTTGTGTTGTTCCAGCTTTCATGACCGATGCTGAAGCCTTTGCAGCAGTCG CCCTCGCCGCCGTTTCTTGTGACGGGGCCCTCGGTCGAGACGAAGCCCATGCCCTTCGTCGCCAACTTGAATTCAGATAC CCCTATCGGGAGCGCTCGGAAGCCGCTATGGGCGAGCTCTTTGATCAACTCCTAAGCCTGTTGCGTCAGGAGGGTGTAGA TGGACTGATTAGCAAAGCATTACCTGCCCTGTCTTCGCTCCAACAGGAAAGTGCCTTGGCAGTCGCCGCCCAGTTAGTCC ATTCAGATCGCGAGGTCTCAAAGGAGGAAGCTGCTTTCCTGGAGGATCTAGCTTGCAAGCTTGACCTACCTTCTGAGCGA GCAAGGATTGTGATTCAAGCAATTTCTGCTCTGAATCGAGACAGCTTGCTCAGCTGA
Upstream 100 bases:
>100_bases CATAACACTGCCATAAGCATCAACCCGACGGCGGCAATGCCAGCCAGGACCTCAGCACGCTGAAAGCTCGGCGTAACAAG GTCCACTGTTAAAGCATTAA
Downstream 100 bases:
>100_bases CGGCAGACTGCAATATGAGCTGTTGTTGAACTGATGCCTGTTCTGAGATCAAGCCGCTTTCTCGGTGTTCTGATCAGCAT CCTCCTGGGTCTGATTCTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MQPKRGSTARRSGKYAQLVASNETKVMSDALTLAQMGCVVPAFMTDAEAFAAVALAAVSCDGALGRDEAHALRRQLEFRY PYRERSEAAMGELFDQLLSLLRQEGVDGLISKALPALSSLQQESALAVAAQLVHSDREVSKEEAAFLEDLACKLDLPSER ARIVIQAISALNRDSLLS
Sequences:
>Translated_178_residues MQPKRGSTARRSGKYAQLVASNETKVMSDALTLAQMGCVVPAFMTDAEAFAAVALAAVSCDGALGRDEAHALRRQLEFRY PYRERSEAAMGELFDQLLSLLRQEGVDGLISKALPALSSLQQESALAVAAQLVHSDREVSKEEAAFLEDLACKLDLPSER ARIVIQAISALNRDSLLS >Mature_178_residues MQPKRGSTARRSGKYAQLVASNETKVMSDALTLAQMGCVVPAFMTDAEAFAAVALAAVSCDGALGRDEAHALRRQLEFRY PYRERSEAAMGELFDQLLSLLRQEGVDGLISKALPALSSLQQESALAVAAQLVHSDREVSKEEAAFLEDLACKLDLPSER ARIVIQAISALNRDSLLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19238; Mature: 19238
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPKRGSTARRSGKYAQLVASNETKVMSDALTLAQMGCVVPAFMTDAEAFAAVALAAVSC CCCCCCCCHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC DGALGRDEAHALRRQLEFRYPYRERSEAAMGELFDQLLSLLRQEGVDGLISKALPALSSL CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH QQESALAVAAQLVHSDREVSKEEAAFLEDLACKLDLPSERARIVIQAISALNRDSLLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHCCC >Mature Secondary Structure MQPKRGSTARRSGKYAQLVASNETKVMSDALTLAQMGCVVPAFMTDAEAFAAVALAAVSC CCCCCCCCHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC DGALGRDEAHALRRQLEFRYPYRERSEAAMGELFDQLLSLLRQEGVDGLISKALPALSSL CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH QQESALAVAAQLVHSDREVSKEEAAFLEDLACKLDLPSERARIVIQAISALNRDSLLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA