| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124022810
Identifier: 124022810
GI number: 124022810
Start: 986113
End: 986796
Strand: Reverse
Name: 124022810
Synonym: P9303_11031
Alternate gene names: NA
Gene position: 986796-986113 (Counterclockwise)
Preceding gene: 124022811
Following gene: 124022809
Centisome position: 36.78
GC content: 50.29
Gene sequence:
>684_bases ATGGCCGATAAGTCAGCGAAATGGATCACAGCCCTGCGCGACGGGATCAGACGACAATGTGGCGATGGCTGGATGGTTCG CGGCGTTGGTGACGGGCTACTCCAGAGGGTTCAGCTGACTGTGCGCTTCGACGATGGCACCCGCACCAGCATCATCCTCG GTCCAAAGGCCAAGAGCGATCCTGATTTCGTTCCATGGATCGCAACAAGCGCTGATTGGATCTTGAAAATTTCAACTGAG ATCTCTGAGTTAATGAAAGATCAGGGCAAAGGATTGACTGATGCCTACGAGTTGGTGAAACAAAGAAACGAGTCTGGAGC TGATGGTGAATTCGATTGGGAACGACTACTAAAAAAATTCAAATCACATAAAACAAGTAAAAGCAAAAATGGAGCCCGGG TTTGGAACCGTAACTACCGCACTCCCCTTGCCCGTACAGTCGTTATTCTCACAAGCCAGCCTGAACCCAGCTCTGGCTAC ACGCTCTTGAAAGCATTGATCGAACGTCATGGAGGAGAGCCCGGCTCTACAAGCAGAAGACTTCGCATTCAGTACGCAGC AGAATTCCTTCGCTTCGCGTTTAAACATGGCGCCAACAGGCGTTGGCTACCACCGGAAGATCTCAAGACATTGATCGGCG AAAAAAGTGTCGATTTCACTCAGAACAACGTCAACACGGTGTAG
Upstream 100 bases:
>100_bases CAGCAGACCAAAGCAAAAGCCCCAGCGGCTTGAGGATGCAACCGCAACACTGTTGAATTGACAAGAACAATCCAACAGCT TGTGGTGCAACAGGGTCCCA
Downstream 100 bases:
>100_bases GGGTGTAGGAAACCAAGCCGCTTCGCCACATTCCAGCTGACAGGCAAACCGCTAGTCCCCCTTCAGGTCTCGCATTGATC AGCGCCTGCTTGAAGCTCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 227; Mature: 226
Protein sequence:
>227_residues MADKSAKWITALRDGIRRQCGDGWMVRGVGDGLLQRVQLTVRFDDGTRTSIILGPKAKSDPDFVPWIATSADWILKISTE ISELMKDQGKGLTDAYELVKQRNESGADGEFDWERLLKKFKSHKTSKSKNGARVWNRNYRTPLARTVVILTSQPEPSSGY TLLKALIERHGGEPGSTSRRLRIQYAAEFLRFAFKHGANRRWLPPEDLKTLIGEKSVDFTQNNVNTV
Sequences:
>Translated_227_residues MADKSAKWITALRDGIRRQCGDGWMVRGVGDGLLQRVQLTVRFDDGTRTSIILGPKAKSDPDFVPWIATSADWILKISTE ISELMKDQGKGLTDAYELVKQRNESGADGEFDWERLLKKFKSHKTSKSKNGARVWNRNYRTPLARTVVILTSQPEPSSGY TLLKALIERHGGEPGSTSRRLRIQYAAEFLRFAFKHGANRRWLPPEDLKTLIGEKSVDFTQNNVNTV >Mature_226_residues ADKSAKWITALRDGIRRQCGDGWMVRGVGDGLLQRVQLTVRFDDGTRTSIILGPKAKSDPDFVPWIATSADWILKISTEI SELMKDQGKGLTDAYELVKQRNESGADGEFDWERLLKKFKSHKTSKSKNGARVWNRNYRTPLARTVVILTSQPEPSSGYT LLKALIERHGGEPGSTSRRLRIQYAAEFLRFAFKHGANRRWLPPEDLKTLIGEKSVDFTQNNVNTV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25664; Mature: 25532
Theoretical pI: Translated: 10.50; Mature: 10.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADKSAKWITALRDGIRRQCGDGWMVRGVGDGLLQRVQLTVRFDDGTRTSIILGPKAKSD CCCCHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHEEEEEEECCCCCEEEEECCCCCCC PDFVPWIATSADWILKISTEISELMKDQGKGLTDAYELVKQRNESGADGEFDWERLLKKF CCCCCEEECCCCEEEEEHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHH KSHKTSKSKNGARVWNRNYRTPLARTVVILTSQPEPSSGYTLLKALIERHGGEPGSTSRR HHHCCCCCCCCCHHHCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCHH LRIQYAAEFLRFAFKHGANRRWLPPEDLKTLIGEKSVDFTQNNVNTV HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure ADKSAKWITALRDGIRRQCGDGWMVRGVGDGLLQRVQLTVRFDDGTRTSIILGPKAKSD CCCHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHEEEEEEECCCCCEEEEECCCCCCC PDFVPWIATSADWILKISTEISELMKDQGKGLTDAYELVKQRNESGADGEFDWERLLKKF CCCCCEEECCCCEEEEEHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHH KSHKTSKSKNGARVWNRNYRTPLARTVVILTSQPEPSSGYTLLKALIERHGGEPGSTSRR HHHCCCCCCCCCHHHCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCHH LRIQYAAEFLRFAFKHGANRRWLPPEDLKTLIGEKSVDFTQNNVNTV HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA