| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124022809
Identifier: 124022809
GI number: 124022809
Start: 984513
End: 985982
Strand: Reverse
Name: 124022809
Synonym: P9303_11021
Alternate gene names: NA
Gene position: 985982-984513 (Counterclockwise)
Preceding gene: 124022810
Following gene: 124022807
Centisome position: 36.75
GC content: 52.72
Gene sequence:
>1470_bases ATGCCCAAGCAAAGCTTGCCTGCGATCGCTGGCTACGAAGCCGAAATTATTGCCCTGGTTCAGCAAGCTAATCCCGCTGT GCTCACGCATAGCAATCGCAAGCTGGAGCAGTTTCAGTCAGCCTTTGCCTGTGCTCTCCACATGCATCAGCCCACGATTC CAGCAGGTGCGAATGGAGAACTGATCTCGCATCTGCAATACATGCTGGAGCACAGCGAAGAAGGCGATAACCACAACGCC GAACCCTTTGCCCATTGCTACAAGCGCCTCGCAGACATCATTCCCCAACTGATTCAAGAGGGATGCAACCCTCGCATCAT GCTGGATTACTCAGGCAACTTGCTCTGGGGTGTTGAGCAAATGGACCGTGTCGACATTCTCGAGGCGCTTAAACGTCTGG CATGCGATCCCACGCTTCAACCCCATGTGGAATGGCTCGGCACCTTTTGGAGCCATGCCGTTGCACCCTCAACTCCTATT CCAGATCTAAAGCTACAAATCCTGGCCTGGCAGCATCAATTCGCTGCCATGTTTGGGCGGCAGGCATTGCAACGAGTGAA GGGTTTCTCGCCACCGGAAATGCACCTTCCCAACCATCCAGACACCCTCTATGAATTGGTGAAAGCCCTCAGAGATTGCG GATACCGTTGGCTCCTTGTTCAAGAAAACAGCGTTGAAAACTTCGATGGCTCATGCCTTCGCCATGCACAGAAATACGGC CCCAATCAACTTGTGGCTCGTAACTCCAGAGGGGAAACAGTCAGCATTGTGGCGTTGATCAAAACCCAGGGCTCAGACAC CAAATTGGTAGGGCAGATGCAGCCCTATCACGAAGCATTAGGCCTGGGCAGACAATCACTGGCAGGCAAATCGATTCCAT CATTGGTCTCTCAAATTGCCGACGGAGAAAATGGAGGCGTAATGATGAATGAGTTTCCAGCCGCCTTTATCCAAGCCCAT CAAACCATTGCTTCCCAGGTTGATCCTGTAAGCACAGTTGCGCTCAACGGCACTGAATATCTGGAGTTACTGGAGGCCGC CGGTGTGGAAGCCTCTGATTACCCAAAGATTCAGGCGATACAGCAACACAAGCTGTGGCATAACACTGACAGCCCCATCA ACCCCGAATCAATCGAAGCGGCCATCAGCGACCTCAAAGAAACAGATCCCTCCTTCTCAATGGACGGCGCATCCTGGACC AACAATCTCAGCTGGATCAAGGGCTATGAAAATGTGCTGGAACCGATCAACAGCCTCAGCGCAAAGTTTCACCAGCTGTT TGATCCCTTGGTGACAAAGGATCCAGCGATCACGCAAACCCCGCACTATCAAGAAGCTCTGCTCTACCTGCTAATGCTAG AAACCAGTTGCTTCCGCTATTGGGGGCAAGGCACCTGGACCAACTACGCCAATGAGATCCACCGGCGCGGTGAAGCCATG GTCGAAGCAGCAAACCAGGCACTGAGATAG
Upstream 100 bases:
>100_bases TTCCAGCTGACAGGCAAACCGCTAGTCCCCCTTCAGGTCTCGCATTGATCAGCGCCTGCTTGAAGCTCTACCAGGCCCGT ACTACCGCAAACAAAAGTTG
Downstream 100 bases:
>100_bases GTGTTCGTCAAAACAACAAGGCAAAAGCAAAGCCTTCAACTTTGCAGTCAATCCCAAAGCGATCGCAACCATCAATAATC GGCATCATGCCTAGAGGATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 489; Mature: 488
Protein sequence:
>489_residues MPKQSLPAIAGYEAEIIALVQQANPAVLTHSNRKLEQFQSAFACALHMHQPTIPAGANGELISHLQYMLEHSEEGDNHNA EPFAHCYKRLADIIPQLIQEGCNPRIMLDYSGNLLWGVEQMDRVDILEALKRLACDPTLQPHVEWLGTFWSHAVAPSTPI PDLKLQILAWQHQFAAMFGRQALQRVKGFSPPEMHLPNHPDTLYELVKALRDCGYRWLLVQENSVENFDGSCLRHAQKYG PNQLVARNSRGETVSIVALIKTQGSDTKLVGQMQPYHEALGLGRQSLAGKSIPSLVSQIADGENGGVMMNEFPAAFIQAH QTIASQVDPVSTVALNGTEYLELLEAAGVEASDYPKIQAIQQHKLWHNTDSPINPESIEAAISDLKETDPSFSMDGASWT NNLSWIKGYENVLEPINSLSAKFHQLFDPLVTKDPAITQTPHYQEALLYLLMLETSCFRYWGQGTWTNYANEIHRRGEAM VEAANQALR
Sequences:
>Translated_489_residues MPKQSLPAIAGYEAEIIALVQQANPAVLTHSNRKLEQFQSAFACALHMHQPTIPAGANGELISHLQYMLEHSEEGDNHNA EPFAHCYKRLADIIPQLIQEGCNPRIMLDYSGNLLWGVEQMDRVDILEALKRLACDPTLQPHVEWLGTFWSHAVAPSTPI PDLKLQILAWQHQFAAMFGRQALQRVKGFSPPEMHLPNHPDTLYELVKALRDCGYRWLLVQENSVENFDGSCLRHAQKYG PNQLVARNSRGETVSIVALIKTQGSDTKLVGQMQPYHEALGLGRQSLAGKSIPSLVSQIADGENGGVMMNEFPAAFIQAH QTIASQVDPVSTVALNGTEYLELLEAAGVEASDYPKIQAIQQHKLWHNTDSPINPESIEAAISDLKETDPSFSMDGASWT NNLSWIKGYENVLEPINSLSAKFHQLFDPLVTKDPAITQTPHYQEALLYLLMLETSCFRYWGQGTWTNYANEIHRRGEAM VEAANQALR >Mature_488_residues PKQSLPAIAGYEAEIIALVQQANPAVLTHSNRKLEQFQSAFACALHMHQPTIPAGANGELISHLQYMLEHSEEGDNHNAE PFAHCYKRLADIIPQLIQEGCNPRIMLDYSGNLLWGVEQMDRVDILEALKRLACDPTLQPHVEWLGTFWSHAVAPSTPIP DLKLQILAWQHQFAAMFGRQALQRVKGFSPPEMHLPNHPDTLYELVKALRDCGYRWLLVQENSVENFDGSCLRHAQKYGP NQLVARNSRGETVSIVALIKTQGSDTKLVGQMQPYHEALGLGRQSLAGKSIPSLVSQIADGENGGVMMNEFPAAFIQAHQ TIASQVDPVSTVALNGTEYLELLEAAGVEASDYPKIQAIQQHKLWHNTDSPINPESIEAAISDLKETDPSFSMDGASWTN NLSWIKGYENVLEPINSLSAKFHQLFDPLVTKDPAITQTPHYQEALLYLLMLETSCFRYWGQGTWTNYANEIHRRGEAMV EAANQALR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54514; Mature: 54383
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKQSLPAIAGYEAEIIALVQQANPAVLTHSNRKLEQFQSAFACALHMHQPTIPAGANGE CCCCCCCCCCCCCHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCHH LISHLQYMLEHSEEGDNHNAEPFAHCYKRLADIIPQLIQEGCNPRIMLDYSGNLLWGVEQ HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEECHHH MDRVDILEALKRLACDPTLQPHVEWLGTFWSHAVAPSTPIPDLKLQILAWQHQFAAMFGR HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHH QALQRVKGFSPPEMHLPNHPDTLYELVKALRDCGYRWLLVQENSVENFDGSCLRHAQKYG HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHCC PNQLVARNSRGETVSIVALIKTQGSDTKLVGQMQPYHEALGLGRQSLAGKSIPSLVSQIA CCCEEEECCCCCEEEEEEEEECCCCCCEECCCCCHHHHHHCCCHHHHCCCHHHHHHHHHH DGENGGVMMNEFPAAFIQAHQTIASQVDPVSTVALNGTEYLELLEAAGVEASDYPKIQAI CCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHCCCCCCCCCHHHHH QQHKLWHNTDSPINPESIEAAISDLKETDPSFSMDGASWTNNLSWIKGYENVLEPINSLS HHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH AKFHQLFDPLVTKDPAITQTPHYQEALLYLLMLETSCFRYWGQGTWTNYANEIHRRGEAM HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH VEAANQALR HHHHHHHCC >Mature Secondary Structure PKQSLPAIAGYEAEIIALVQQANPAVLTHSNRKLEQFQSAFACALHMHQPTIPAGANGE CCCCCCCCCCCCHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCHH LISHLQYMLEHSEEGDNHNAEPFAHCYKRLADIIPQLIQEGCNPRIMLDYSGNLLWGVEQ HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEECHHH MDRVDILEALKRLACDPTLQPHVEWLGTFWSHAVAPSTPIPDLKLQILAWQHQFAAMFGR HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHH QALQRVKGFSPPEMHLPNHPDTLYELVKALRDCGYRWLLVQENSVENFDGSCLRHAQKYG HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHCC PNQLVARNSRGETVSIVALIKTQGSDTKLVGQMQPYHEALGLGRQSLAGKSIPSLVSQIA CCCEEEECCCCCEEEEEEEEECCCCCCEECCCCCHHHHHHCCCHHHHCCCHHHHHHHHHH DGENGGVMMNEFPAAFIQAHQTIASQVDPVSTVALNGTEYLELLEAAGVEASDYPKIQAI CCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHCCCCCCCCCHHHHH QQHKLWHNTDSPINPESIEAAISDLKETDPSFSMDGASWTNNLSWIKGYENVLEPINSLS HHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH AKFHQLFDPLVTKDPAITQTPHYQEALLYLLMLETSCFRYWGQGTWTNYANEIHRRGEAM HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH VEAANQALR HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA