| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is hemH
Identifier: 124022475
GI number: 124022475
Start: 705309
End: 706484
Strand: Direct
Name: hemH
Synonym: P9303_07661
Alternate gene names: 124022475
Gene position: 705309-706484 (Clockwise)
Preceding gene: 124022468
Following gene: 124022477
Centisome position: 26.29
GC content: 53.06
Gene sequence:
>1176_bases ATGGCCCGGGTCGGTGTCCTCTTGATGAATCTTGGGGGACCTGAACGTATCCAGGATGTAGGGCCTTTTCTCTTTAATAT TTTTGCCGATCCGGAGATCATTCGGCTGCCTAACCCCGCTCTTCAGAGGCCTCTGGCCTGGTTGATCAGCACGCTGCGCA GCAGTAAATCCGAGCAGGCTTACCGCTCAATAGGGGGCGGTTCACCTCTGCGGCGGATCACTGAACAACAGGCTCGGGAG TTGCAGAGCTTGCTTCGGCAACGCGGTATCGATGCCACGAGCTATGTGGCGATGCGTTATTGGCATCCCTTCACAGAATC CGCTGTCGCAGATATCAAAGCTGATGGGATTGATCAGGTGGTGGTGCTTCCCCTCTACCCTCATTTTTCGATTAGTACCA GTGGCTCGAGTTTTCGAGAGTTGCAGCGCTTGCGACAGACTGATGAATCTTTCCGCAAGCTGCCAATACGTTGTATCCGC AGCTGGTACGACCACCCTGGATATGTTCTTGCCATGGCGGAGTTGATCGCTGAGCAGGTTCGACTGAGTGATGTGCCTGA AGAAGCTCAAGTGTTTTTTAGTGCTCATGGAGTGCCCAAGAGCTATGTCGAACAAGCAGGTGATCCATACCAGAAGGAGA TCGAGGCTTGTACAACCTTGATCATGGCTGAGCTGGAAAACCTTCTTGGCTATGGCAATCCTCATTCCCTTGCCTATCAA AGCCGAGTGGGTCCAGAGGAATGGATTCAGCCCTATACCGATGAAGTTATTGAGCAGCTTGGTGAGGCTGGTACACGGGA TTTAGTGGTTGTGCCGATCAGCTTTGTGAGCGAACACATCGAAACTCTCGCCGAGCTTGATATCGAATACCGCGAGCTGG CGACCGAAGCAGGGATTGTTCATTTCAGGAGGGTGCCTGCTCTTGATACTTACCCCACATTCATTGAGGGCCTGGCCGAT CTGGTTGGATCCAGTCTTGAGGGGCCAGAGATCAATCTCGATGAGGCTGCCAAGCTGGCCGGTCGAGTGAAGTTCTATCC CCAGGAGAGATGGCAATGGGGCTTGAATACCAGTTCTGAGGCATGGAATGGACGCATAGCCATGCTTGGTTTTGCGGCTT TTTTGTTGGAGCTGATCAGTGGCCATGGCCCTTTGCACGCGATCGGTCTGCTCTGA
Upstream 100 bases:
>100_bases TTGATTAGCTCGTTGCTCAGCTCCATGGCCCTGTAGGGATGGTGCCACCTTGGCGTTGATGGCAGCTACCCTCAAGTCCC TATAAAGAACTCTCTTCTAT
Downstream 100 bases:
>100_bases GTGCTGGCTAGTTAAGGGTGGTCTCACTCTTCTTGTTGGTTCGTTTGTGGGATGACTGTTCTCAACGGAGTCCATTTGTA TTGGGGCATTCGCCCTCAGG
Product: ferrochelatase
Products: NA
Alternate protein names: Heme synthase; Protoheme ferro-lyase
Number of amino acids: Translated: 391; Mature: 390
Protein sequence:
>391_residues MARVGVLLMNLGGPERIQDVGPFLFNIFADPEIIRLPNPALQRPLAWLISTLRSSKSEQAYRSIGGGSPLRRITEQQARE LQSLLRQRGIDATSYVAMRYWHPFTESAVADIKADGIDQVVVLPLYPHFSISTSGSSFRELQRLRQTDESFRKLPIRCIR SWYDHPGYVLAMAELIAEQVRLSDVPEEAQVFFSAHGVPKSYVEQAGDPYQKEIEACTTLIMAELENLLGYGNPHSLAYQ SRVGPEEWIQPYTDEVIEQLGEAGTRDLVVVPISFVSEHIETLAELDIEYRELATEAGIVHFRRVPALDTYPTFIEGLAD LVGSSLEGPEINLDEAAKLAGRVKFYPQERWQWGLNTSSEAWNGRIAMLGFAAFLLELISGHGPLHAIGLL
Sequences:
>Translated_391_residues MARVGVLLMNLGGPERIQDVGPFLFNIFADPEIIRLPNPALQRPLAWLISTLRSSKSEQAYRSIGGGSPLRRITEQQARE LQSLLRQRGIDATSYVAMRYWHPFTESAVADIKADGIDQVVVLPLYPHFSISTSGSSFRELQRLRQTDESFRKLPIRCIR SWYDHPGYVLAMAELIAEQVRLSDVPEEAQVFFSAHGVPKSYVEQAGDPYQKEIEACTTLIMAELENLLGYGNPHSLAYQ SRVGPEEWIQPYTDEVIEQLGEAGTRDLVVVPISFVSEHIETLAELDIEYRELATEAGIVHFRRVPALDTYPTFIEGLAD LVGSSLEGPEINLDEAAKLAGRVKFYPQERWQWGLNTSSEAWNGRIAMLGFAAFLLELISGHGPLHAIGLL >Mature_390_residues ARVGVLLMNLGGPERIQDVGPFLFNIFADPEIIRLPNPALQRPLAWLISTLRSSKSEQAYRSIGGGSPLRRITEQQAREL QSLLRQRGIDATSYVAMRYWHPFTESAVADIKADGIDQVVVLPLYPHFSISTSGSSFRELQRLRQTDESFRKLPIRCIRS WYDHPGYVLAMAELIAEQVRLSDVPEEAQVFFSAHGVPKSYVEQAGDPYQKEIEACTTLIMAELENLLGYGNPHSLAYQS RVGPEEWIQPYTDEVIEQLGEAGTRDLVVVPISFVSEHIETLAELDIEYRELATEAGIVHFRRVPALDTYPTFIEGLADL VGSSLEGPEINLDEAAKLAGRVKFYPQERWQWGLNTSSEAWNGRIAMLGFAAFLLELISGHGPLHAIGLL
Specific function: Catalyzes the ferrous insertion into protoporphyrin IX
COG id: COG0276
COG function: function code H; Protoheme ferro-lyase (ferrochelatase)
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ferrochelatase family
Homologues:
Organism=Homo sapiens, GI60499021, Length=337, Percent_Identity=37.3887240356083, Blast_Score=206, Evalue=3e-53, Organism=Homo sapiens, GI60499025, Length=337, Percent_Identity=37.3887240356083, Blast_Score=206, Evalue=3e-53, Organism=Escherichia coli, GI1786681, Length=328, Percent_Identity=32.6219512195122, Blast_Score=135, Evalue=5e-33, Organism=Saccharomyces cerevisiae, GI6324750, Length=339, Percent_Identity=35.9882005899705, Blast_Score=202, Evalue=7e-53, Organism=Drosophila melanogaster, GI17864156, Length=332, Percent_Identity=34.6385542168675, Blast_Score=198, Evalue=6e-51, Organism=Drosophila melanogaster, GI24651774, Length=261, Percent_Identity=32.183908045977, Blast_Score=140, Evalue=2e-33, Organism=Drosophila melanogaster, GI45552018, Length=173, Percent_Identity=38.728323699422, Blast_Score=120, Evalue=2e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HEMH_PROM3 (A2C7Q7)
Other databases:
- EMBL: CP000554 - RefSeq: YP_001016782.1 - ProteinModelPortal: A2C7Q7 - SMR: A2C7Q7 - STRING: A2C7Q7 - GeneID: 4778288 - GenomeReviews: CP000554_GR - KEGG: pmf:P9303_07661 - eggNOG: COG0276 - HOGENOM: HBG697135 - OMA: LAPHFST - ProtClustDB: PRK00035 - GO: GO:0005737 - HAMAP: MF_00323 - InterPro: IPR001015 - InterPro: IPR019772 - PANTHER: PTHR11108 - TIGRFAMs: TIGR00109
Pfam domain/function: PF00762 Ferrochelatase
EC number: =4.99.1.1
Molecular weight: Translated: 43747; Mature: 43616
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: PS00534 FERROCHELATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARVGVLLMNLGGPERIQDVGPFLFNIFADPEIIRLPNPALQRPLAWLISTLRSSKSEQA CCCCEEEEEECCCHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHCCHHHHH YRSIGGGSPLRRITEQQARELQSLLRQRGIDATSYVAMRYWHPFTESAVADIKADGIDQV HHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCE VVLPLYPHFSISTSGSSFRELQRLRQTDESFRKLPIRCIRSWYDHPGYVLAMAELIAEQV EEEECCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH RLSDVPEEAQVFFSAHGVPKSYVEQAGDPYQKEIEACTTLIMAELENLLGYGNPHSLAYQ HHCCCCHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH SRVGPEEWIQPYTDEVIEQLGEAGTRDLVVVPISFVSEHIETLAELDIEYRELATEAGIV HCCCHHHHHCCHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHCHHHHHHHHHHHHH HFRRVPALDTYPTFIEGLADLVGSSLEGPEINLDEAAKLAGRVKFYPQERWQWGLNTSSE HHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHHCCCCCCCCC AWNGRIAMLGFAAFLLELISGHGPLHAIGLL CCCCHHHHHHHHHHHHHHHHCCCCCEECCCC >Mature Secondary Structure ARVGVLLMNLGGPERIQDVGPFLFNIFADPEIIRLPNPALQRPLAWLISTLRSSKSEQA CCCEEEEEECCCHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHCCHHHHH YRSIGGGSPLRRITEQQARELQSLLRQRGIDATSYVAMRYWHPFTESAVADIKADGIDQV HHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCE VVLPLYPHFSISTSGSSFRELQRLRQTDESFRKLPIRCIRSWYDHPGYVLAMAELIAEQV EEEECCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH RLSDVPEEAQVFFSAHGVPKSYVEQAGDPYQKEIEACTTLIMAELENLLGYGNPHSLAYQ HHCCCCHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH SRVGPEEWIQPYTDEVIEQLGEAGTRDLVVVPISFVSEHIETLAELDIEYRELATEAGIV HCCCHHHHHCCHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHCHHHHHHHHHHHHH HFRRVPALDTYPTFIEGLADLVGSSLEGPEINLDEAAKLAGRVKFYPQERWQWGLNTSSE HHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHHCCCCCCCCC AWNGRIAMLGFAAFLLELISGHGPLHAIGLL CCCCHHHHHHHHHHHHHHHHCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA